RNA–Protein interactions for RNA: ENST00000494980.5

CHMP2B-205, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 3 BASIC

Gene CHMP2B, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-205ENST00000494980 ARFIP1P53367 373 aa12.52□□□□□ -0.41
CHMP2B-205ENST00000494980 E2F2Q14209 437 aa12.52□□□□□ -0.41
CHMP2B-205ENST00000494980 C2orf68Q2NKX9 166 aa12.52□□□□□ -0.41
CHMP2B-205ENST00000494980 FAM180BQ6P0A1 224 aa12.52□□□□□ -0.41
CHMP2B-205ENST00000494980 GALNT5Q7Z7M9 940 aa12.52□□□□□ -0.41
CHMP2B-205ENST00000494980 CCDC116Q8IYX3 515 aa12.52□□□□□ -0.41
CHMP2B-205ENST00000494980 ZNF75CPQ92670 426 aaPredicted RBP12.52□□□□□ -0.41
CHMP2B-205ENST00000494980 DOK1Q99704 481 aa12.52□□□□□ -0.41
CHMP2B-205ENST00000494980 KCNS3Q9BQ31 491 aa12.52□□□□□ -0.41
CHMP2B-205ENST00000494980 DESI2Q9BSY9 194 aa12.52□□□□□ -0.41
CHMP2B-205ENST00000494980 MCMBPQ9BTE3 642 aa12.52□□□□□ -0.41
CHMP2B-205ENST00000494980 ZNF665Q9H7R5 613 aa12.52□□□□□ -0.41
CHMP2B-205ENST00000494980 COQ10BQ9H8M1 238 aa12.52□□□□□ -0.41
CHMP2B-205ENST00000494980 SLC17A5Q9NRA2 495 aa12.52□□□□□ -0.41
CHMP2B-205ENST00000494980 MED17Q9NVC6 651 aa12.52□□□□□ -0.41
CHMP2B-205ENST00000494980 ASB6Q9NWX5 421 aa12.52□□□□□ -0.41
CHMP2B-205ENST00000494980 CTNNAL1Q9UBT7 734 aa12.52□□□□□ -0.41
CHMP2B-205ENST00000494980 AMDHD2Q9Y303 409 aa12.52□□□□□ -0.41
CHMP2B-205ENST00000494980 CLPSL1A2RUU4 121 aa12.51□□□□□ -0.41
CHMP2B-205ENST00000494980 GOLGA6L6A8MZA4 724 aa12.51□□□□□ -0.41
CHMP2B-205ENST00000494980 PPIHO43447 177 aaKnown RBP12.51□□□□□ -0.41
CHMP2B-205ENST00000494980 ITGA5P08648 1049 aa12.51□□□□□ -0.41
CHMP2B-205ENST00000494980 ADRA2AP08913 450 aa12.51□□□□□ -0.41
CHMP2B-205ENST00000494980 CSNK2A2P19784 350 aaPredicted RBP12.51□□□□□ -0.41
CHMP2B-205ENST00000494980 GGT5P36269 586 aa12.51□□□□□ -0.41
CHMP2B-205ENST00000494980 PIK3CBP42338 1070 aa12.51□□□□□ -0.41
CHMP2B-205ENST00000494980 VPS41P49754 854 aa12.51□□□□□ -0.41
CHMP2B-205ENST00000494980 ZNF41P51814 821 aaPredicted RBP12.51□□□□□ -0.41
CHMP2B-205ENST00000494980 TGFBIQ15582 683 aa12.51□□□□□ -0.41
CHMP2B-205ENST00000494980 ARMCX4Q5H9R4 360 aa12.51□□□□□ -0.41
CHMP2B-205ENST00000494980 APOOLQ6UXV4 268 aa12.51□□□□□ -0.41
CHMP2B-205ENST00000494980 CDK20Q8IZL9 346 aa12.51□□□□□ -0.41
CHMP2B-205ENST00000494980 TCAIMQ8N3R3 496 aa12.51□□□□□ -0.41
CHMP2B-205ENST00000494980 NOA1Q8NC60 698 aaKnown RBP12.51□□□□□ -0.41
CHMP2B-205ENST00000494980 TCF7L1Q9HCS4 588 aa12.51□□□□□ -0.41
CHMP2B-205ENST00000494980 NUP50Q9UKX7 468 aa12.51□□□□□ -0.41
CHMP2B-205ENST00000494980 CES1P1Q9UKY3 287 aa12.51□□□□□ -0.41
CHMP2B-205ENST00000494980 VWA7Q9Y334 891 aa12.51□□□□□ -0.41
CHMP2B-205ENST00000494980 TSC22D4Q9Y3Q8 395 aa12.51□□□□□ -0.41
CHMP2B-205ENST00000494980 FAM181BA6NEQ2 426 aa12.5□□□□□ -0.41
CHMP2B-205ENST00000494980 ZNF724A8MTY0 619 aa12.5□□□□□ -0.41
CHMP2B-205ENST00000494980 CCNT2O60583 730 aaKnown RBP12.5□□□□□ -0.41
CHMP2B-205ENST00000494980 SEC14L2O76054 403 aa12.5□□□□□ -0.41
CHMP2B-205ENST00000494980 NGFP01138 241 aa12.5□□□□□ -0.41
CHMP2B-205ENST00000494980 CTAGE8P0CG41 777 aa12.5□□□□□ -0.41
CHMP2B-205ENST00000494980 ACHEP22303 614 aa12.5□□□□□ -0.41
CHMP2B-205ENST00000494980 COL8A2P25067 703 aa12.5□□□□□ -0.41
CHMP2B-205ENST00000494980 RELBQ01201 579 aa12.5□□□□□ -0.41
CHMP2B-205ENST00000494980 ZNF460Q14592 562 aa12.5□□□□□ -0.41
CHMP2B-205ENST00000494980 C9orf135Q5VTT2 229 aa12.5□□□□□ -0.41
CHMP2B-205ENST00000494980 SLC48A1Q6P1K1 146 aa12.5□□□□□ -0.41
CHMP2B-205ENST00000494980 SPATA21Q7Z572 469 aa12.5□□□□□ -0.41
CHMP2B-205ENST00000494980 CTAGE4Q8IX94 777 aa12.5□□□□□ -0.41
CHMP2B-205ENST00000494980 RIBC1Q8N443 379 aaPredicted RBP12.5□□□□□ -0.41
CHMP2B-205ENST00000494980 NKAPQ8N5F7 415 aaKnown RBP12.5□□□□□ -0.41
CHMP2B-205ENST00000494980 SLC16A11Q8NCK7 471 aa12.5□□□□□ -0.41
CHMP2B-205ENST00000494980 FBXO30Q8TB52 745 aa12.5□□□□□ -0.41
CHMP2B-205ENST00000494980 KLHL29Q96CT2 875 aa12.5□□□□□ -0.41
CHMP2B-205ENST00000494980 KLHDC3Q9BQ90 382 aa12.5□□□□□ -0.41
CHMP2B-205ENST00000494980 ZNF275Q9NSD4 429 aaPredicted RBP12.5□□□□□ -0.41
CHMP2B-205ENST00000494980 NECAP2Q9NVZ3 263 aa12.5□□□□□ -0.41
CHMP2B-205ENST00000494980 PLEK2Q9NYT0 353 aa12.5□□□□□ -0.41
CHMP2B-205ENST00000494980 GUCA1BQ9UMX6 200 aa12.5□□□□□ -0.41
CHMP2B-205ENST00000494980 IGHV1-18A0A0C4DH31 117 aa12.49□□□□□ -0.41
CHMP2B-205ENST00000494980 SLITRK5O94991 958 aa12.49□□□□□ -0.41
CHMP2B-205ENST00000494980 GATA3P23771 443 aa12.49□□□□□ -0.41
CHMP2B-205ENST00000494980 PTX3P26022 381 aaPredicted RBP12.49□□□□□ -0.41
CHMP2B-205ENST00000494980 CDC25BP30305 580 aa12.49□□□□□ -0.41
CHMP2B-205ENST00000494980 RFX3P48380 749 aa12.49□□□□□ -0.41
CHMP2B-205ENST00000494980 ZNF155Q12901 538 aaPredicted RBP12.49□□□□□ -0.41
CHMP2B-205ENST00000494980 ERCC6LQ2NKX8 1250 aa12.49□□□□□ -0.41
CHMP2B-205ENST00000494980 FAM45BPQ6NSW5 357 aa12.49□□□□□ -0.41
CHMP2B-205ENST00000494980 GALNT18Q6P9A2 607 aa12.49□□□□□ -0.41
CHMP2B-205ENST00000494980 LRRC70Q7Z2Q7 622 aa12.49□□□□□ -0.41
CHMP2B-205ENST00000494980 AGGF1Q8N302 714 aaeCLIP12.49□□□□□ -0.41
CHMP2B-205ENST00000494980 FAM45AQ8TCE6 357 aa12.49□□□□□ -0.41
CHMP2B-205ENST00000494980 CKAP2Q8WWK9 683 aa12.49□□□□□ -0.41
CHMP2B-205ENST00000494980 APH1AQ96BI3 265 aa12.49□□□□□ -0.41
CHMP2B-205ENST00000494980 MALT1Q9UDY8 824 aa12.49□□□□□ -0.41
CHMP2B-205ENST00000494980 BOLA1Q9Y3E2 137 aa12.49□□□□□ -0.41
CHMP2B-205ENST00000494980 TMEM129A0AVI4 362 aa12.48□□□□□ -0.41
CHMP2B-205ENST00000494980 C5orf63A6NC05 138 aa12.48□□□□□ -0.41
CHMP2B-205ENST00000494980 CCDC188H7C350 402 aa12.48□□□□□ -0.41
CHMP2B-205ENST00000494980 FOXE1O00358 373 aaPredicted RBP12.48□□□□□ -0.41
CHMP2B-205ENST00000494980 CYTIPO60759 359 aa12.48□□□□□ -0.41
CHMP2B-205ENST00000494980 DEAF1O75398 565 aaPredicted RBP12.48□□□□□ -0.41
CHMP2B-205ENST00000494980 BCAS2O75934 225 aaPredicted RBP12.48□□□□□ -0.41
CHMP2B-205ENST00000494980 CRYAAP02489 173 aa12.48□□□□□ -0.41
CHMP2B-205ENST00000494980 HPXP02790 462 aa12.48□□□□□ -0.41
CHMP2B-205ENST00000494980 CSF1P09603 554 aa12.48□□□□□ -0.41
CHMP2B-205ENST00000494980 MLNP12872 115 aa12.48□□□□□ -0.41
CHMP2B-205ENST00000494980 NPR2P20594 1047 aa12.48□□□□□ -0.41
CHMP2B-205ENST00000494980 MAGEA6P43360 314 aa12.48□□□□□ -0.41
CHMP2B-205ENST00000494980 PRR5P85299 388 aa12.48□□□□□ -0.41
CHMP2B-205ENST00000494980 FOXF1Q12946 379 aa12.48□□□□□ -0.41
CHMP2B-205ENST00000494980 TMEM176BQ3YBM2 270 aaPredicted RBP12.48□□□□□ -0.41
CHMP2B-205ENST00000494980 GRHL2Q6ISB3 625 aa12.48□□□□□ -0.41
CHMP2B-205ENST00000494980 IKBIPQ70UQ0 350 aa12.48□□□□□ -0.41
CHMP2B-205ENST00000494980 C17orf78Q8N4C9 275 aa12.48□□□□□ -0.41
CHMP2B-205ENST00000494980 ATP6V1C2Q8NEY4 427 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms