RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 TPST1O60507 370 aa10.06□□□□□ -0.8
APTX-230ENST00000494649 HCN1O60741 890 aa10.06□□□□□ -0.8
APTX-230ENST00000494649 GFRA1P56159 465 aa10.06□□□□□ -0.8
APTX-230ENST00000494649 B3GALT5-AS1P59052 145 aa10.06□□□□□ -0.8
APTX-230ENST00000494649 PLPPR5Q32ZL2 321 aa10.06□□□□□ -0.8
APTX-230ENST00000494649 WLSQ5T9L3 541 aa10.06□□□□□ -0.8
APTX-230ENST00000494649 REEP3Q6NUK4 255 aa10.06□□□□□ -0.8
APTX-230ENST00000494649 PPP4R4Q6NUP7 873 aa10.06□□□□□ -0.8
APTX-230ENST00000494649 MTERF4Q7Z6M4 381 aaKnown RBP10.06□□□□□ -0.8
APTX-230ENST00000494649 MISPQ8IVT2 679 aa10.06□□□□□ -0.8
APTX-230ENST00000494649 ZNF563Q8TA94 476 aa10.06□□□□□ -0.8
APTX-230ENST00000494649 SARAFQ96BY9 339 aa10.06□□□□□ -0.8
APTX-230ENST00000494649 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.06□□□□□ -0.8
APTX-230ENST00000494649 THUMPD1Q9NXG2 353 aaKnown RBP10.06□□□□□ -0.8
APTX-230ENST00000494649 DNAJB12Q9NXW2 375 aaKnown RBP10.06□□□□□ -0.8
APTX-230ENST00000494649 CALML5Q9NZT1 146 aa10.06□□□□□ -0.8
APTX-230ENST00000494649 ZNF835Q9Y2P0 537 aa10.06□□□□□ -0.8
APTX-230ENST00000494649 CHST2Q9Y4C5 530 aa10.06□□□□□ -0.8
APTX-230ENST00000494649 DIDO1Q9BTC0 2240 aaKnown RBP10.06□□□□□ -0.8
APTX-230ENST00000494649 IGLV3-32A0A0A0MS00 114 aa10.06□□□□□ -0.8
APTX-230ENST00000494649 A0A0G2JPF8 293 aa10.06□□□□□ -0.8
APTX-230ENST00000494649 HNRNPCL2B2RXH8 293 aa10.06□□□□□ -0.8
APTX-230ENST00000494649 HNRNPCL3B7ZW38 293 aa10.06□□□□□ -0.8
APTX-230ENST00000494649 HNRNPCL1O60812 293 aaKnown RBP10.06□□□□□ -0.8
APTX-230ENST00000494649 ZG16O60844 167 aa10.06□□□□□ -0.8
APTX-230ENST00000494649 DBIP07108 87 aaKnown RBP10.06□□□□□ -0.8
APTX-230ENST00000494649 STSP08842 583 aa10.06□□□□□ -0.8
APTX-230ENST00000494649 PABPC4LP0CB38 370 aaKnown RBP10.06□□□□□ -0.8
APTX-230ENST00000494649 HNRNPCL4P0DMR1 293 aa10.06□□□□□ -0.8
APTX-230ENST00000494649 ESRRAP11474 423 aaPredicted RBP10.06□□□□□ -0.8
APTX-230ENST00000494649 PRG2P13727 222 aa10.06□□□□□ -0.8
APTX-230ENST00000494649 NID1P14543 1247 aa10.06□□□□□ -0.8
APTX-230ENST00000494649 CCNA2P20248 432 aa10.06□□□□□ -0.8
APTX-230ENST00000494649 POU3F2P20265 443 aaPredicted RBP10.06□□□□□ -0.8
APTX-230ENST00000494649 RPS4Y1P22090 263 aaKnown RBP10.06□□□□□ -0.8
APTX-230ENST00000494649 CA7P43166 264 aa10.06□□□□□ -0.8
APTX-230ENST00000494649 GZMMP51124 257 aa10.06□□□□□ -0.8
APTX-230ENST00000494649 CASP6P55212 293 aa10.06□□□□□ -0.8
APTX-230ENST00000494649 CLDN20P56880 219 aa10.06□□□□□ -0.8
APTX-230ENST00000494649 TXNL4AP83876 142 aaKnown RBP10.06□□□□□ -0.8
APTX-230ENST00000494649 MXRA7P84157 204 aa10.06□□□□□ -0.8
APTX-230ENST00000494649 SLC25A3Q00325 362 aa10.06□□□□□ -0.8
APTX-230ENST00000494649 QPRTQ15274 297 aa10.06□□□□□ -0.8
APTX-230ENST00000494649 VASNQ6EMK4 673 aa10.06□□□□□ -0.8
APTX-230ENST00000494649 C11orf65Q8NCR3 313 aa10.06□□□□□ -0.8
APTX-230ENST00000494649 TOR1AIP2Q8NFQ8 470 aa10.06□□□□□ -0.8
APTX-230ENST00000494649 OR8J3Q8NGG0 315 aa10.06□□□□□ -0.8
APTX-230ENST00000494649 OR10Q1Q8NGQ4 319 aa10.06□□□□□ -0.8
APTX-230ENST00000494649 OR5W2Q8NH69 310 aa10.06□□□□□ -0.8
APTX-230ENST00000494649 BBS10Q8TAM1 723 aa10.06□□□□□ -0.8
APTX-230ENST00000494649 POC1BQ8TC44 478 aa10.06□□□□□ -0.8
APTX-230ENST00000494649 GPR119Q8TDV5 335 aa10.06□□□□□ -0.8
APTX-230ENST00000494649 PRR14Q9BWN1 585 aa10.06□□□□□ -0.8
APTX-230ENST00000494649 TMEM38AQ9H6F2 299 aa10.06□□□□□ -0.8
APTX-230ENST00000494649 TAGLN3Q9UI15 199 aa10.06□□□□□ -0.8
APTX-230ENST00000494649 NME4O00746 187 aa10.05□□□□□ -0.8
APTX-230ENST00000494649 GCM2O75603 506 aaPredicted RBP10.05□□□□□ -0.8
APTX-230ENST00000494649 LINGO3P0C6S8 592 aa10.05□□□□□ -0.8
APTX-230ENST00000494649 TCN1P20061 433 aaPredicted RBP10.05□□□□□ -0.8
APTX-230ENST00000494649 SFTPDP35247 375 aa10.05□□□□□ -0.8
APTX-230ENST00000494649 IDH2P48735 452 aaKnown RBP10.05□□□□□ -0.8
APTX-230ENST00000494649 SUCLG1P53597 346 aaKnown RBP10.05□□□□□ -0.8
APTX-230ENST00000494649 DMTNQ08495 405 aa10.05□□□□□ -0.8
APTX-230ENST00000494649 CBFBQ13951 182 aa10.05□□□□□ -0.8
APTX-230ENST00000494649 GNA13Q14344 377 aa10.05□□□□□ -0.8
APTX-230ENST00000494649 GANABQ14697 944 aaKnown RBP10.05□□□□□ -0.8
APTX-230ENST00000494649 LIN52Q52LA3 116 aa10.05□□□□□ -0.8
APTX-230ENST00000494649 AAGABQ6PD74 315 aa10.05□□□□□ -0.8
APTX-230ENST00000494649 RPTNQ6XPR3 784 aa10.05□□□□□ -0.8
APTX-230ENST00000494649 SERPINA11Q86U17 422 aa10.05□□□□□ -0.8
APTX-230ENST00000494649 SLC15A3Q8IY34 581 aa10.05□□□□□ -0.8
APTX-230ENST00000494649 ANKS4BQ8N8V4 417 aa10.05□□□□□ -0.8
APTX-230ENST00000494649 FAM156AQ8NDB6 213 aa10.05□□□□□ -0.8
APTX-230ENST00000494649 HIPK4Q8NE63 616 aa10.05□□□□□ -0.8
APTX-230ENST00000494649 WDYHV1Q96HA8 205 aa10.05□□□□□ -0.8
APTX-230ENST00000494649 ZNF583Q96ND8 569 aa10.05□□□□□ -0.8
APTX-230ENST00000494649 WFDC6Q9BQY6 131 aa10.05□□□□□ -0.8
APTX-230ENST00000494649 PIGQQ9BRB3 760 aa10.05□□□□□ -0.8
APTX-230ENST00000494649 LAT2Q9GZY6 243 aa10.05□□□□□ -0.8
APTX-230ENST00000494649 CACYBPQ9HB71 228 aaKnown RBP10.05□□□□□ -0.8
APTX-230ENST00000494649 ADA2Q9NZK5 511 aa10.05□□□□□ -0.8
APTX-230ENST00000494649 ANGPT4Q9Y264 503 aa10.05□□□□□ -0.8
APTX-230ENST00000494649 SLC35A3Q9Y2D2 325 aa10.05□□□□□ -0.8
APTX-230ENST00000494649 KIAA1549Q9HCM3 1950 aa10.05□□□□□ -0.8
APTX-230ENST00000494649 CDHR4A6H8M9 788 aa10.05□□□□□ -0.8
APTX-230ENST00000494649 FAM47E-STBD1D6RA91 191 aa10.05□□□□□ -0.8
APTX-230ENST00000494649 H0Y3Z8 333 aa10.05□□□□□ -0.8
APTX-230ENST00000494649 M0QX08 132 aa10.05□□□□□ -0.8
APTX-230ENST00000494649 PRKCAP17252 672 aa10.05□□□□□ -0.8
APTX-230ENST00000494649 MSX1P28360 303 aa10.05□□□□□ -0.8
APTX-230ENST00000494649 SHC1P29353 583 aa10.05□□□□□ -0.8
APTX-230ENST00000494649 MSX2P35548 267 aaPredicted RBP10.05□□□□□ -0.8
APTX-230ENST00000494649 MAGEA8P43361 318 aa10.05□□□□□ -0.8
APTX-230ENST00000494649 LHX2P50458 406 aa10.05□□□□□ -0.8
APTX-230ENST00000494649 PSME3P61289 254 aa10.05□□□□□ -0.8
APTX-230ENST00000494649 EEF1A1P68104 462 aaKnown RBP10.05□□□□□ -0.8
APTX-230ENST00000494649 LIPEQ05469 1076 aa10.05□□□□□ -0.8
APTX-230ENST00000494649 LARS2Q15031 903 aaKnown RBP10.05□□□□□ -0.8
APTX-230ENST00000494649 VMACQ2NL98 169 aa10.05□□□□□ -0.8
APTX-230ENST00000494649 Q6ZPB1 254 aaPredicted RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms