RNA–Protein interactions for RNA: ENST00000494571.1

ATG3-207, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 2,758 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-207ENST00000494571 CREBL2O60519 120 aaPredicted RBP3.78□□□□□ -1.8
ATG3-207ENST00000494571 SCGNO76038 276 aa3.78□□□□□ -1.8
ATG3-207ENST00000494571 RLN1P04808 185 aa3.78□□□□□ -1.8
ATG3-207ENST00000494571 F13BP05160 661 aa3.78□□□□□ -1.8
ATG3-207ENST00000494571 SERPIND1P05546 499 aa3.78□□□□□ -1.8
ATG3-207ENST00000494571 BCHEP06276 602 aa3.78□□□□□ -1.8
ATG3-207ENST00000494571 HOXB5P09067 269 aa3.78□□□□□ -1.8
ATG3-207ENST00000494571 GIPP09681 153 aaPredicted RBP3.78□□□□□ -1.8
ATG3-207ENST00000494571 SFTA3P0C7M3 94 aa3.78□□□□□ -1.8
ATG3-207ENST00000494571 GKN3PP0CG01 181 aa3.78□□□□□ -1.8
ATG3-207ENST00000494571 UBBP0CG47 229 aa3.78□□□□□ -1.8
ATG3-207ENST00000494571 CPN1P15169 458 aa3.78□□□□□ -1.8
ATG3-207ENST00000494571 BMP7P18075 431 aa3.78□□□□□ -1.8
ATG3-207ENST00000494571 HOXA5P20719 270 aa3.78□□□□□ -1.8
ATG3-207ENST00000494571 PRPS1L1P21108 318 aa3.78□□□□□ -1.8
ATG3-207ENST00000494571 TACR3P29371 465 aa3.78□□□□□ -1.8
ATG3-207ENST00000494571 CNR2P34972 360 aa3.78□□□□□ -1.8
ATG3-207ENST00000494571 IRS1P35568 1242 aa3.78□□□□□ -1.8
ATG3-207ENST00000494571 SLC1A2P43004 574 aa3.78□□□□□ -1.8
ATG3-207ENST00000494571 GLP1RP43220 463 aa3.78□□□□□ -1.8
ATG3-207ENST00000494571 PITPNBP48739 271 aa3.78□□□□□ -1.8
ATG3-207ENST00000494571 CLK2P49760 499 aaKnown RBP3.78□□□□□ -1.8
ATG3-207ENST00000494571 TDGF1P3P51864 188 aa3.78□□□□□ -1.8
ATG3-207ENST00000494571 CDH12P55289 794 aa3.78□□□□□ -1.8
ATG3-207ENST00000494571 DNAJB13P59910 316 aa3.78□□□□□ -1.8
ATG3-207ENST00000494571 FABP5Q01469 135 aa3.78□□□□□ -1.8
ATG3-207ENST00000494571 SLC10A1Q14973 349 aa3.78□□□□□ -1.8
ATG3-207ENST00000494571 OR7A5Q15622 319 aa3.78□□□□□ -1.8
ATG3-207ENST00000494571 TAZQ16635 292 aa3.78□□□□□ -1.8
ATG3-207ENST00000494571 PNLIPRP3Q17RR3 467 aa3.78□□□□□ -1.8
ATG3-207ENST00000494571 C4orf17Q53FE4 359 aa3.78□□□□□ -1.8
ATG3-207ENST00000494571 CRB2Q5IJ48 1285 aa3.78□□□□□ -1.8
ATG3-207ENST00000494571 INTS6LQ5JSJ4 861 aaKnown RBP3.78□□□□□ -1.8
ATG3-207ENST00000494571 DCST1Q5T197 706 aa3.78□□□□□ -1.8
ATG3-207ENST00000494571 ATPAF1Q5TC12 328 aaPredicted RBP3.78□□□□□ -1.8
ATG3-207ENST00000494571 PRAMEF20Q5VT98 475 aa3.78□□□□□ -1.8
ATG3-207ENST00000494571 CXorf57Q6NSI4 855 aaKnown RBP3.78□□□□□ -1.8
ATG3-207ENST00000494571 TAPT1Q6NXT6 567 aa3.78□□□□□ -1.8
ATG3-207ENST00000494571 C19orf48Q6RUI8 117 aa3.78□□□□□ -1.8
ATG3-207ENST00000494571 SLC36A4Q6YBV0 504 aa3.78□□□□□ -1.8
ATG3-207ENST00000494571 GDPGP1Q6ZNW5 385 aa3.78□□□□□ -1.8
ATG3-207ENST00000494571 ARMCX2Q7L311 632 aa3.78□□□□□ -1.8
ATG3-207ENST00000494571 FAM131BQ86XD5 332 aa3.78□□□□□ -1.8
ATG3-207ENST00000494571 FAM129CQ86XR2 697 aa3.78□□□□□ -1.8
ATG3-207ENST00000494571 ZNF664Q8N3J9 261 aa3.78□□□□□ -1.8
ATG3-207ENST00000494571 GTPBP8Q8N3Z3 284 aaPredicted RBP3.78□□□□□ -1.8
ATG3-207ENST00000494571 ACBD4Q8NC06 268 aa3.78□□□□□ -1.8
ATG3-207ENST00000494571 OR10G2Q8NGC3 310 aa3.78□□□□□ -1.8
ATG3-207ENST00000494571 OR14K1Q8NGZ2 314 aa3.78□□□□□ -1.8
ATG3-207ENST00000494571 OR56B4Q8NH76 319 aa3.78□□□□□ -1.8
ATG3-207ENST00000494571 TNFAIP8L1Q8WVP5 186 aa3.78□□□□□ -1.8
ATG3-207ENST00000494571 RGP1Q92546 391 aaPredicted RBP3.78□□□□□ -1.8
ATG3-207ENST00000494571 OSTF1Q92882 214 aa3.78□□□□□ -1.8
ATG3-207ENST00000494571 ARL11Q969Q4 196 aa3.78□□□□□ -1.8
ATG3-207ENST00000494571 RAB24Q969Q5 203 aa3.78□□□□□ -1.8
ATG3-207ENST00000494571 NSUN4Q96CB9 384 aaKnown RBP3.78□□□□□ -1.8
ATG3-207ENST00000494571 MVB12AQ96EY5 273 aa3.78□□□□□ -1.8
ATG3-207ENST00000494571 DTD2Q96FN9 168 aa3.78□□□□□ -1.8
ATG3-207ENST00000494571 NUDT11Q96G61 164 aa3.78□□□□□ -1.8
ATG3-207ENST00000494571 C7orf34Q96L11 122 aa3.78□□□□□ -1.8
ATG3-207ENST00000494571 JSRP1Q96MG2 331 aaPredicted RBP3.78□□□□□ -1.8
ATG3-207ENST00000494571 IP6K3Q96PC2 410 aa3.78□□□□□ -1.8
ATG3-207ENST00000494571 SEPT5Q99719 369 aaPredicted RBP3.78□□□□□ -1.8
ATG3-207ENST00000494571 NKX3-1Q99801 234 aaPredicted RBP3.78□□□□□ -1.8
ATG3-207ENST00000494571 WDR13Q9H1Z4 485 aa3.78□□□□□ -1.8
ATG3-207ENST00000494571 ATXN3LQ9H3M9 355 aa3.78□□□□□ -1.8
ATG3-207ENST00000494571 METTL8Q9H825 291 aaKnown RBP3.78□□□□□ -1.8
ATG3-207ENST00000494571 RNF122Q9H9V4 155 aa3.78□□□□□ -1.8
ATG3-207ENST00000494571 ZFYVE1Q9HBF4 777 aa3.78□□□□□ -1.8
ATG3-207ENST00000494571 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.78□□□□□ -1.8
ATG3-207ENST00000494571 TMEM184CQ9NVA4 438 aa3.78□□□□□ -1.8
ATG3-207ENST00000494571 C1orf109Q9NX04 203 aa3.78□□□□□ -1.8
ATG3-207ENST00000494571 FAM120CQ9NX05 1096 aaKnown RBP3.78□□□□□ -1.8
ATG3-207ENST00000494571 SLC2A6Q9UGQ3 507 aa3.78□□□□□ -1.8
ATG3-207ENST00000494571 NOD1Q9Y239 953 aa3.78□□□□□ -1.8
ATG3-207ENST00000494571 SNX11Q9Y5W9 270 aa3.78□□□□□ -1.8
ATG3-207ENST00000494571 COL1A1P02452 1464 aaPredicted RBP3.77□□□□□ -1.81
ATG3-207ENST00000494571 RGPD8O14715 1765 aaPredicted RBP3.77□□□□□ -1.81
ATG3-207ENST00000494571 RGPD5Q99666 1765 aa3.77□□□□□ -1.81
ATG3-207ENST00000494571 TCRBV21S2A2A0A5A6 115 aa3.77□□□□□ -1.81
ATG3-207ENST00000494571 H3BN98 237 aa3.77□□□□□ -1.81
ATG3-207ENST00000494571 ACOT7O00154 380 aa3.77□□□□□ -1.81
ATG3-207ENST00000494571 NDUFS8O00217 210 aa3.77□□□□□ -1.81
ATG3-207ENST00000494571 TNFRSF11BO00300 401 aa3.77□□□□□ -1.81
ATG3-207ENST00000494571 DVL2O14641 736 aa3.77□□□□□ -1.81
ATG3-207ENST00000494571 ITGB1BP1O14713 200 aa3.77□□□□□ -1.81
ATG3-207ENST00000494571 SMAD6O43541 496 aaKnown RBP3.77□□□□□ -1.81
ATG3-207ENST00000494571 PRKYO43930 277 aa3.77□□□□□ -1.81
ATG3-207ENST00000494571 GALR3O60755 368 aaPredicted RBP3.77□□□□□ -1.81
ATG3-207ENST00000494571 ZNF821O75541 412 aaPredicted RBP3.77□□□□□ -1.81
ATG3-207ENST00000494571 OPN1SWP03999 348 aa3.77□□□□□ -1.81
ATG3-207ENST00000494571 HEXAP06865 529 aa3.77□□□□□ -1.81
ATG3-207ENST00000494571 ETFAP13804 333 aa3.77□□□□□ -1.81
ATG3-207ENST00000494571 RAB6AP20340 208 aa3.77□□□□□ -1.81
ATG3-207ENST00000494571 ITGB7P26010 798 aa3.77□□□□□ -1.81
ATG3-207ENST00000494571 CALCRP30988 508 aa3.77□□□□□ -1.81
ATG3-207ENST00000494571 IL2RGP31785 369 aa3.77□□□□□ -1.81
ATG3-207ENST00000494571 RPL3P39023 403 aaKnown RBP3.77□□□□□ -1.81
ATG3-207ENST00000494571 OR3A1P47881 315 aa3.77□□□□□ -1.81
ATG3-207ENST00000494571 ZFP36L2P47974 494 aaKnown RBP3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms