RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 SNRPD2P62316 118 aaKnown RBP17.97■□□□□ 0.47
COL27A1-207ENST00000494090 YPEL5P62699 121 aa17.97■□□□□ 0.47
COL27A1-207ENST00000494090 PIP5KL1Q5T9C9 394 aa17.97■□□□□ 0.47
COL27A1-207ENST00000494090 TMEM184AQ6ZMB5 413 aa17.97■□□□□ 0.47
COL27A1-207ENST00000494090 ACSS1Q9NUB1 689 aaPredicted RBP17.97■□□□□ 0.47
COL27A1-207ENST00000494090 GPR160Q9UJ42 338 aa17.97■□□□□ 0.47
COL27A1-207ENST00000494090 EEF1E1-BLOC1S5C9J1V9 151 aa17.97■□□□□ 0.47
COL27A1-207ENST00000494090 SC5DO75845 299 aa17.97■□□□□ 0.47
COL27A1-207ENST00000494090 C1SP09871 688 aa17.97■□□□□ 0.47
COL27A1-207ENST00000494090 CD38P28907 300 aa17.97■□□□□ 0.47
COL27A1-207ENST00000494090 C21orf33P30042 268 aaPredicted RBP17.97■□□□□ 0.47
COL27A1-207ENST00000494090 EPHA4P54764 986 aa17.97■□□□□ 0.47
COL27A1-207ENST00000494090 OPN5Q6U736 354 aa17.97■□□□□ 0.47
COL27A1-207ENST00000494090 OR8J2Q8NGG1 315 aa17.97■□□□□ 0.47
COL27A1-207ENST00000494090 CDS1Q92903 461 aa17.97■□□□□ 0.47
COL27A1-207ENST00000494090 OR10A5Q9H207 317 aa17.97■□□□□ 0.47
COL27A1-207ENST00000494090 OR10A2Q9H208 303 aa17.97■□□□□ 0.47
COL27A1-207ENST00000494090 DDX31Q9H8H2 851 aaKnown RBP17.97■□□□□ 0.47
COL27A1-207ENST00000494090 ARAFP10398 606 aa17.96■□□□□ 0.47
COL27A1-207ENST00000494090 HOXD9P28356 352 aaPredicted RBP17.96■□□□□ 0.47
COL27A1-207ENST00000494090 SLC5A2P31639 672 aa17.96■□□□□ 0.47
COL27A1-207ENST00000494090 PBX2P40425 430 aa17.96■□□□□ 0.47
COL27A1-207ENST00000494090 PCGF3Q3KNV8 242 aa17.96■□□□□ 0.47
COL27A1-207ENST00000494090 KIAA0907Q7Z7F0 614 aaPredicted RBP17.96■□□□□ 0.47
COL27A1-207ENST00000494090 NOXA1Q86UR1 476 aa17.96■□□□□ 0.47
COL27A1-207ENST00000494090 OR2T35Q8NGX2 323 aa17.96■□□□□ 0.47
COL27A1-207ENST00000494090 MS4A4AQ96JQ5 239 aa17.96■□□□□ 0.47
COL27A1-207ENST00000494090 THAP7Q9BT49 309 aaPredicted RBP17.96■□□□□ 0.47
COL27A1-207ENST00000494090 REV1Q9UBZ9 1251 aa17.96■□□□□ 0.47
COL27A1-207ENST00000494090 ADAM29Q9UKF5 820 aa17.96■□□□□ 0.47
COL27A1-207ENST00000494090 SFTPDP35247 375 aa17.96■□□□□ 0.47
COL27A1-207ENST00000494090 HBA1P69905 142 aa17.96■□□□□ 0.47
COL27A1-207ENST00000494090 RAB31Q13636 194 aa17.96■□□□□ 0.47
COL27A1-207ENST00000494090 TMEM244Q5VVB8 128 aa17.96■□□□□ 0.47
COL27A1-207ENST00000494090 SLC6A19Q695T7 634 aa17.96■□□□□ 0.47
COL27A1-207ENST00000494090 LANCL3Q6ZV70 420 aa17.96■□□□□ 0.47
COL27A1-207ENST00000494090 LILRA2Q8N149 483 aa17.96■□□□□ 0.47
COL27A1-207ENST00000494090 CSNK2A3Q8NEV1 391 aa17.96■□□□□ 0.47
COL27A1-207ENST00000494090 TBC1D20Q96BZ9 403 aa17.96■□□□□ 0.47
COL27A1-207ENST00000494090 BPIFA2Q96DR5 249 aa17.96■□□□□ 0.47
COL27A1-207ENST00000494090 OR5B12Q96R08 314 aa17.96■□□□□ 0.47
COL27A1-207ENST00000494090 INIPQ9NRY2 104 aa17.96■□□□□ 0.47
COL27A1-207ENST00000494090 CPNE7Q9UBL6 633 aa17.96■□□□□ 0.47
COL27A1-207ENST00000494090 ANKRD30BLA7E2S9 258 aa17.96■□□□□ 0.47
COL27A1-207ENST00000494090 SGK494L7N484 410 aa17.96■□□□□ 0.47
COL27A1-207ENST00000494090 RAB3AP20336 220 aa17.96■□□□□ 0.47
COL27A1-207ENST00000494090 CSNK1A1P48729 337 aa17.96■□□□□ 0.47
COL27A1-207ENST00000494090 SNU13P55769 128 aaKnown RBP17.96■□□□□ 0.47
COL27A1-207ENST00000494090 FAM69AQ5T7M9 428 aa17.96■□□□□ 0.47
COL27A1-207ENST00000494090 METTL4Q8N3J2 472 aa17.96■□□□□ 0.47
COL27A1-207ENST00000494090 ZNF583Q96ND8 569 aa17.96■□□□□ 0.47
COL27A1-207ENST00000494090 HHIPQ96QV1 700 aa17.96■□□□□ 0.47
COL27A1-207ENST00000494090 HCAR1Q9BXC0 346 aa17.96■□□□□ 0.47
COL27A1-207ENST00000494090 AK6Q9Y3D8 172 aaKnown RBP17.96■□□□□ 0.47
COL27A1-207ENST00000494090 SRPX2O60687 465 aaPredicted RBP17.96■□□□□ 0.47
COL27A1-207ENST00000494090 ZFAND5O76080 213 aa17.96■□□□□ 0.47
COL27A1-207ENST00000494090 IL1AP01583 271 aa17.96■□□□□ 0.47
COL27A1-207ENST00000494090 APOC3P02656 99 aa17.96■□□□□ 0.47
COL27A1-207ENST00000494090 ERVK-16P61578 105 aa17.96■□□□□ 0.47
COL27A1-207ENST00000494090 S100A12P80511 92 aa17.96■□□□□ 0.47
COL27A1-207ENST00000494090 CNN3Q15417 329 aaKnown RBP17.96■□□□□ 0.47
COL27A1-207ENST00000494090 SLC5A12Q1EHB4 618 aa17.96■□□□□ 0.47
COL27A1-207ENST00000494090 LMF1Q96S06 567 aa17.96■□□□□ 0.47
COL27A1-207ENST00000494090 C7orf50Q9BRJ6 194 aaKnown RBP17.96■□□□□ 0.47
COL27A1-207ENST00000494090 APMAPQ9HDC9 416 aa17.96■□□□□ 0.47
COL27A1-207ENST00000494090 KCNK5O95279 499 aa17.96■□□□□ 0.46
COL27A1-207ENST00000494090 F3P13726 295 aa17.96■□□□□ 0.46
COL27A1-207ENST00000494090 ACSM3Q53FZ2 586 aa17.96■□□□□ 0.46
COL27A1-207ENST00000494090 GPR139Q6DWJ6 353 aa17.96■□□□□ 0.46
COL27A1-207ENST00000494090 BTBD2Q9BX70 525 aa17.96■□□□□ 0.46
COL27A1-207ENST00000494090 ERVK-19Q9WJR5 959 aa17.96■□□□□ 0.46
COL27A1-207ENST00000494090 SLC9B1P1A6NJY1 282 aa17.95■□□□□ 0.46
COL27A1-207ENST00000494090 H0YIV9 168 aa17.95■□□□□ 0.46
COL27A1-207ENST00000494090 SOCS7O14512 581 aa17.95■□□□□ 0.46
COL27A1-207ENST00000494090 GOSR2O14653 212 aa17.95■□□□□ 0.46
COL27A1-207ENST00000494090 MT-CO2P00403 227 aa17.95■□□□□ 0.46
COL27A1-207ENST00000494090 ACP2P11117 423 aa17.95■□□□□ 0.46
COL27A1-207ENST00000494090 HIST1H1TP22492 207 aaPredicted RBP17.95■□□□□ 0.46
COL27A1-207ENST00000494090 RTL6Q6ICC9 239 aa17.95■□□□□ 0.46
COL27A1-207ENST00000494090 OR2T11Q8NH01 316 aa17.95■□□□□ 0.46
COL27A1-207ENST00000494090 C17orf113A0A1B0GUU1 675 aa17.95■□□□□ 0.46
COL27A1-207ENST00000494090 CSF1P09603 554 aa17.95■□□□□ 0.46
COL27A1-207ENST00000494090 IDUAP35475 653 aa17.95■□□□□ 0.46
COL27A1-207ENST00000494090 HACD4Q5VWC8 232 aa17.95■□□□□ 0.46
COL27A1-207ENST00000494090 OR51T1Q8NGJ9 327 aa17.95■□□□□ 0.46
COL27A1-207ENST00000494090 RHOXF1Q8NHV9 184 aa17.95■□□□□ 0.46
COL27A1-207ENST00000494090 OR7D2Q96RA2 312 aa17.95■□□□□ 0.46
COL27A1-207ENST00000494090 INTS14Q96SY0 518 aa17.95■□□□□ 0.46
COL27A1-207ENST00000494090 PKD1L3Q7Z443 1732 aa17.95■□□□□ 0.46
COL27A1-207ENST00000494090 MSX1P28360 303 aa17.95■□□□□ 0.46
COL27A1-207ENST00000494090 PCBD1P61457 104 aa17.95■□□□□ 0.46
COL27A1-207ENST00000494090 DPY19L2P1Q6NXN4 242 aa17.95■□□□□ 0.46
COL27A1-207ENST00000494090 TMEM150AQ86TG1 271 aa17.95■□□□□ 0.46
COL27A1-207ENST00000494090 PARP16Q8N5Y8 322 aa17.95■□□□□ 0.46
COL27A1-207ENST00000494090 OR9K2Q8NGE7 335 aa17.95■□□□□ 0.46
COL27A1-207ENST00000494090 GAB3Q8WWW8 586 aa17.95■□□□□ 0.46
COL27A1-207ENST00000494090 SNAPC3Q92966 411 aa17.95■□□□□ 0.46
COL27A1-207ENST00000494090 FOXRED1Q96CU9 486 aaPredicted RBP17.95■□□□□ 0.46
COL27A1-207ENST00000494090 TXNDC15Q96J42 360 aa17.95■□□□□ 0.46
COL27A1-207ENST00000494090 SYNPO2LQ9H987 977 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms