RNA–Protein interactions for RNA: ENST00000494014.1

EPHA3-203, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-203ENST00000494014 DDX6P26196 483 aaKnown RBP eCLIP6.59□□□□□ -1.35
EPHA3-203ENST00000494014 RNF144AP50876 292 aaPredicted RBP6.59□□□□□ -1.35
EPHA3-203ENST00000494014 CCR9P51686 369 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 DGKEP52429 567 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 MVDP53602 400 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 CTSCP53634 463 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 DGCR2P98153 550 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 EFNB1P98172 346 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 MAT1AQ00266 395 aaKnown RBP6.59□□□□□ -1.35
EPHA3-203ENST00000494014 EEF1A2Q05639 463 aaKnown RBP6.59□□□□□ -1.35
EPHA3-203ENST00000494014 CACNG1Q06432 222 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 BCL2L1Q07817 233 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 FZD5Q13467 585 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 SERINC3Q13530 473 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 GINS1Q14691 196 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 PTPRRQ15256 657 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 EIF2S3LQ2VIR3 472 aaKnown RBP6.59□□□□□ -1.35
EPHA3-203ENST00000494014 CDNFQ49AH0 187 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 ARSIQ5FYB1 569 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 EOGTQ5NDL2 527 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 FRG2Q64ET8 278 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 ZNF626Q68DY1 528 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 PGBD2Q6P3X8 592 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 ANGPTL8Q6UXH0 198 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 LINGO4Q6UY18 593 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 MOB3CQ70IA8 216 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 EID2Q8N6I1 236 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 OR11G2Q8NGC1 345 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 HAVCR2Q8TDQ0 301 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 SMAP2Q8WU79 429 aaPredicted RBP6.59□□□□□ -1.35
EPHA3-203ENST00000494014 SMIM4Q8WVI0 70 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 RFKQ969G6 155 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 ZFP42Q96MM3 310 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 FRG2BQ96QU4 278 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 UTP23Q9BRU9 249 aaKnown RBP6.59□□□□□ -1.35
EPHA3-203ENST00000494014 EBPLQ9BY08 206 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 BEX1Q9HBH7 125 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 UFSP2Q9NUQ7 469 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 NKIRAS2Q9NYR9 191 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 NTMQ9P121 344 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 KLF15Q9UIH9 416 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 MUC6Q6W4X9 2439 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 A0A0C4DFX4 3053 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 TMEM218A2RU14 115 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 KDM4EB2RXH2 506 aaPredicted RBP6.59□□□□□ -1.35
EPHA3-203ENST00000494014 PHYHO14832 338 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 PGRMC2O15173 223 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 PRAMEF11O60813 436 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 RAMP2O60895 175 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 REM1O75628 298 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 RECKO95980 971 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 WNT1P04628 370 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 ASGR2P07307 311 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 C8AP07357 584 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 GP1BAP07359 652 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 CBSLP0DN79 551 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 SAGP10523 405 aaPredicted RBP6.59□□□□□ -1.35
EPHA3-203ENST00000494014 MPGP29372 298 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 VIPR1P32241 457 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 CBSP35520 551 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 SOX18P35713 384 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 PTGFRP43088 359 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 GIPRP48546 466 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 MECP2P51608 486 aaKnown RBP6.59□□□□□ -1.35
EPHA3-203ENST00000494014 CDK5Q00535 292 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 ADNP2Q6IQ32 1131 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 LIN54Q6MZP7 749 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 WDR53Q7Z5U6 358 aaPredicted RBP6.59□□□□□ -1.35
EPHA3-203ENST00000494014 SLC9B2Q86UD5 537 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 SERPINA12Q8IW75 414 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 LRRC56Q8IYG6 542 aaPredicted RBP6.59□□□□□ -1.35
EPHA3-203ENST00000494014 POGLUT1Q8NBL1 392 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 CPEB1Q9BZB8 566 aaKnown RBP6.59□□□□□ -1.35
EPHA3-203ENST00000494014 ABCG8Q9H221 673 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 CHRDQ9H2X0 955 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 PLEKHA1Q9HB21 404 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 CACYBPQ9HB71 228 aaKnown RBP6.59□□□□□ -1.35
EPHA3-203ENST00000494014 BARX1Q9HBU1 254 aaPredicted RBP6.59□□□□□ -1.35
EPHA3-203ENST00000494014 SLC22A11Q9NSA0 550 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 TMEM30AQ9NV96 361 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 ABRACLQ9P1F3 81 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 RHCGQ9UBD6 479 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 CARHSP1Q9Y2V2 147 aaKnown RBP6.59□□□□□ -1.35
EPHA3-203ENST00000494014 SIT1Q9Y3P8 196 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 NPFFR2Q9Y5X5 522 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 TICRRQ7Z2Z1 1910 aa6.59□□□□□ -1.35
EPHA3-203ENST00000494014 UBE2QL1A1L167 161 aa6.58□□□□□ -1.36
EPHA3-203ENST00000494014 MYBPHLA2RUH7 354 aa6.58□□□□□ -1.36
EPHA3-203ENST00000494014 ARGFXA6NJG6 315 aa6.58□□□□□ -1.36
EPHA3-203ENST00000494014 IQCF5A8MTL0 148 aa6.58□□□□□ -1.36
EPHA3-203ENST00000494014 FAM227AF5H4B4 570 aa6.58□□□□□ -1.36
EPHA3-203ENST00000494014 GPR31O00270 319 aa6.58□□□□□ -1.36
EPHA3-203ENST00000494014 IMPA2O14732 288 aa6.58□□□□□ -1.36
EPHA3-203ENST00000494014 YY2O15391 372 aa6.58□□□□□ -1.36
EPHA3-203ENST00000494014 RNF13O43567 381 aa6.58□□□□□ -1.36
EPHA3-203ENST00000494014 IGFBP1P08833 259 aaPredicted RBP6.58□□□□□ -1.36
EPHA3-203ENST00000494014 ALPIP09923 528 aa6.58□□□□□ -1.36
EPHA3-203ENST00000494014 TYRP1P17643 537 aa6.58□□□□□ -1.36
EPHA3-203ENST00000494014 MST1P26927 711 aa6.58□□□□□ -1.36
EPHA3-203ENST00000494014 ATP5C1P36542 298 aaKnown RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms