RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 HLA-BQ31612 363 aa3.72□□□□□ -1.81
GTF3A-208ENST00000493903 XKR7Q5GH72 579 aa3.72□□□□□ -1.81
GTF3A-208ENST00000493903 FFAR4Q5NUL3 377 aa3.72□□□□□ -1.81
GTF3A-208ENST00000493903 PDZK1Q5T2W1 519 aa3.72□□□□□ -1.81
GTF3A-208ENST00000493903 LINC00242Q5T6M2 205 aa3.72□□□□□ -1.81
GTF3A-208ENST00000493903 WLSQ5T9L3 541 aa3.72□□□□□ -1.81
GTF3A-208ENST00000493903 FAM53AQ6NSI3 398 aaPredicted RBP3.72□□□□□ -1.81
GTF3A-208ENST00000493903 ACSM5Q6NUN0 579 aa3.72□□□□□ -1.81
GTF3A-208ENST00000493903 FAHD2BQ6P2I3 314 aaPredicted RBP3.72□□□□□ -1.81
GTF3A-208ENST00000493903 LCLAT1Q6UWP7 414 aa3.72□□□□□ -1.81
GTF3A-208ENST00000493903 CENPQQ7L2Z9 268 aaPredicted RBP3.72□□□□□ -1.81
GTF3A-208ENST00000493903 SLC26A9Q7LBE3 791 aa3.72□□□□□ -1.81
GTF3A-208ENST00000493903 APTXQ7Z2E3 356 aaKnown RBP3.72□□□□□ -1.81
GTF3A-208ENST00000493903 NUFIP2Q7Z417 695 aaKnown RBP3.72□□□□□ -1.81
GTF3A-208ENST00000493903 CARM1Q86X55 608 aa3.72□□□□□ -1.81
GTF3A-208ENST00000493903 CLEC4FQ8N1N0 589 aa3.72□□□□□ -1.81
GTF3A-208ENST00000493903 COMMD1Q8N668 190 aa3.72□□□□□ -1.81
GTF3A-208ENST00000493903 SAMD12Q8N8I0 201 aa3.72□□□□□ -1.81
GTF3A-208ENST00000493903 OR1L4Q8NGR5 311 aa3.72□□□□□ -1.81
GTF3A-208ENST00000493903 MRGPRDQ8TDS7 321 aa3.72□□□□□ -1.81
GTF3A-208ENST00000493903 DNAJA4Q8WW22 397 aaPredicted RBP3.72□□□□□ -1.81
GTF3A-208ENST00000493903 ST8SIA1Q92185 356 aa3.72□□□□□ -1.81
GTF3A-208ENST00000493903 NTNG2Q96CW9 530 aa3.72□□□□□ -1.81
GTF3A-208ENST00000493903 C10orf35Q96D05 121 aa3.72□□□□□ -1.81
GTF3A-208ENST00000493903 C11orf24Q96F05 449 aaPredicted RBP3.72□□□□□ -1.81
GTF3A-208ENST00000493903 FAHD2AQ96GK7 314 aa3.72□□□□□ -1.81
GTF3A-208ENST00000493903 AGAP3Q96P47 875 aa3.72□□□□□ -1.81
GTF3A-208ENST00000493903 C11orf70Q9BRQ4 267 aa3.72□□□□□ -1.81
GTF3A-208ENST00000493903 NIPSNAP3BQ9BS92 247 aa3.72□□□□□ -1.81
GTF3A-208ENST00000493903 KRTAP17-1Q9BYP8 105 aa3.72□□□□□ -1.81
GTF3A-208ENST00000493903 STRADBQ9C0K7 418 aa3.72□□□□□ -1.81
GTF3A-208ENST00000493903 AUNIPQ9H7T9 357 aa3.72□□□□□ -1.81
GTF3A-208ENST00000493903 ELL3Q9HB65 397 aaPredicted RBP3.72□□□□□ -1.81
GTF3A-208ENST00000493903 IL1RAPQ9NPH3 570 aa3.72□□□□□ -1.81
GTF3A-208ENST00000493903 ESM1Q9NQ30 184 aa3.72□□□□□ -1.81
GTF3A-208ENST00000493903 SLC17A5Q9NRA2 495 aa3.72□□□□□ -1.81
GTF3A-208ENST00000493903 TAS2R16Q9NYV7 291 aa3.72□□□□□ -1.81
GTF3A-208ENST00000493903 PISDQ9UG56 409 aa3.72□□□□□ -1.81
GTF3A-208ENST00000493903 MEMO1Q9Y316 297 aa3.72□□□□□ -1.81
GTF3A-208ENST00000493903 ALG6Q9Y672 507 aa3.72□□□□□ -1.81
GTF3A-208ENST00000493903 RPAP1Q9BWH6 1393 aaPredicted RBP3.72□□□□□ -1.81
GTF3A-208ENST00000493903 ZFYVE9O95405 1425 aa3.71□□□□□ -1.82
GTF3A-208ENST00000493903 ERBINQ96RT1 1412 aa3.71□□□□□ -1.82
GTF3A-208ENST00000493903 DUOX2Q9NRD8 1548 aa3.71□□□□□ -1.82
GTF3A-208ENST00000493903 IGHV3-38A0A0C4DH36 116 aa3.71□□□□□ -1.82
GTF3A-208ENST00000493903 A0A1W2PPE3 182 aa3.71□□□□□ -1.82
GTF3A-208ENST00000493903 BTBD17A6NE02 478 aa3.71□□□□□ -1.82
GTF3A-208ENST00000493903 OR6C65A6NJZ3 312 aa3.71□□□□□ -1.82
GTF3A-208ENST00000493903 PMS2P5A8MQ11 134 aa3.71□□□□□ -1.82
GTF3A-208ENST00000493903 C9JVG2 144 aa3.71□□□□□ -1.82
GTF3A-208ENST00000493903 F5H6K3 240 aa3.71□□□□□ -1.82
GTF3A-208ENST00000493903 SPECC1L-ADORA2AF8WAN1 911 aa3.71□□□□□ -1.82
GTF3A-208ENST00000493903 G3V2L1 256 aa3.71□□□□□ -1.82
GTF3A-208ENST00000493903 F10P00742 488 aa3.71□□□□□ -1.82
GTF3A-208ENST00000493903 IGHG1P01857 330 aa3.71□□□□□ -1.82
GTF3A-208ENST00000493903 IGKV2-30P06310 120 aa3.71□□□□□ -1.82
GTF3A-208ENST00000493903 FCGR3AP08637 254 aa3.71□□□□□ -1.82
GTF3A-208ENST00000493903 IGFBP1P08833 259 aaPredicted RBP3.71□□□□□ -1.82
GTF3A-208ENST00000493903 SNRPCP09234 159 aaKnown RBP3.71□□□□□ -1.82
GTF3A-208ENST00000493903 CD48P09326 243 aa3.71□□□□□ -1.82
GTF3A-208ENST00000493903 OR9G9P0C7N8 305 aa3.71□□□□□ -1.82
GTF3A-208ENST00000493903 MCF2P10911 925 aa3.71□□□□□ -1.82
GTF3A-208ENST00000493903 CD1DP15813 335 aa3.71□□□□□ -1.82
GTF3A-208ENST00000493903 PDHA2P29803 388 aa3.71□□□□□ -1.82
GTF3A-208ENST00000493903 PPP2R1BP30154 601 aa3.71□□□□□ -1.82
GTF3A-208ENST00000493903 RPL13AP40429 203 aaKnown RBP3.71□□□□□ -1.82
GTF3A-208ENST00000493903 GYG1P46976 350 aa3.71□□□□□ -1.82
GTF3A-208ENST00000493903 THBS3P49746 956 aa3.71□□□□□ -1.82
GTF3A-208ENST00000493903 DUSP3P51452 185 aaPredicted RBP3.71□□□□□ -1.82
GTF3A-208ENST00000493903 PHEXP78562 749 aa3.71□□□□□ -1.82
GTF3A-208ENST00000493903 KLRC3Q07444 240 aa3.71□□□□□ -1.82
GTF3A-208ENST00000493903 RAB40BQ12829 278 aa3.71□□□□□ -1.82
GTF3A-208ENST00000493903 MAB21L1Q13394 359 aa3.71□□□□□ -1.82
GTF3A-208ENST00000493903 FAM189A2Q15884 450 aa3.71□□□□□ -1.82
GTF3A-208ENST00000493903 SLC5A12Q1EHB4 618 aa3.71□□□□□ -1.82
GTF3A-208ENST00000493903 MUC21Q5SSG8 566 aa3.71□□□□□ -1.82
GTF3A-208ENST00000493903 OTUD3Q5T2D3 398 aaPredicted RBP3.71□□□□□ -1.82
GTF3A-208ENST00000493903 ZNF324BQ6AW86 544 aaPredicted RBP3.71□□□□□ -1.82
GTF3A-208ENST00000493903 RNASEKQ6P5S7 137 aaKnown RBP3.71□□□□□ -1.82
GTF3A-208ENST00000493903 TMEM107Q6UX40 140 aa3.71□□□□□ -1.82
GTF3A-208ENST00000493903 APOOLQ6UXV4 268 aa3.71□□□□□ -1.82
GTF3A-208ENST00000493903 ADAMTSL5Q6ZMM2 481 aa3.71□□□□□ -1.82
GTF3A-208ENST00000493903 KIF6Q6ZMV9 814 aa3.71□□□□□ -1.82
GTF3A-208ENST00000493903 UTS2BQ765I0 119 aa3.71□□□□□ -1.82
GTF3A-208ENST00000493903 SMIM29Q86T20 159 aa3.71□□□□□ -1.82
GTF3A-208ENST00000493903 IFNEQ86WN2 208 aa3.71□□□□□ -1.82
GTF3A-208ENST00000493903 ALLCQ8N6M5 410 aa3.71□□□□□ -1.82
GTF3A-208ENST00000493903 BEST4Q8NFU0 473 aa3.71□□□□□ -1.82
GTF3A-208ENST00000493903 OR1B1Q8NGR6 318 aa3.71□□□□□ -1.82
GTF3A-208ENST00000493903 CNIH3Q8TBE1 160 aa3.71□□□□□ -1.82
GTF3A-208ENST00000493903 MAIP1Q8WWC4 291 aa3.71□□□□□ -1.82
GTF3A-208ENST00000493903 IL1F10Q8WWZ1 152 aa3.71□□□□□ -1.82
GTF3A-208ENST00000493903 TMEM190Q8WZ59 177 aa3.71□□□□□ -1.82
GTF3A-208ENST00000493903 EFHD2Q96C19 240 aaPredicted RBP3.71□□□□□ -1.82
GTF3A-208ENST00000493903 DNAJA3Q96EY1 480 aa3.71□□□□□ -1.82
GTF3A-208ENST00000493903 GMPPAQ96IJ6 420 aaPredicted RBP3.71□□□□□ -1.82
GTF3A-208ENST00000493903 PRICKLE1Q96MT3 831 aaPredicted RBP3.71□□□□□ -1.82
GTF3A-208ENST00000493903 SLC38A2Q96QD8 506 aa3.71□□□□□ -1.82
GTF3A-208ENST00000493903 MTMR9Q96QG7 549 aa3.71□□□□□ -1.82
GTF3A-208ENST00000493903 BCL7BQ9BQE9 202 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms