RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 PCGF2P35227 344 aa11.11□□□□□ -0.63
UPF3A-210ENST00000493727 CRISP3P54108 245 aa11.11□□□□□ -0.63
UPF3A-210ENST00000493727 KCNJ2P63252 427 aa11.11□□□□□ -0.63
UPF3A-210ENST00000493727 PSG6Q00889 435 aa11.11□□□□□ -0.63
UPF3A-210ENST00000493727 PMP22Q01453 160 aa11.11□□□□□ -0.63
UPF3A-210ENST00000493727 PLCXD2Q0VAA5 305 aa11.11□□□□□ -0.63
UPF3A-210ENST00000493727 DECR1Q16698 335 aa11.11□□□□□ -0.63
UPF3A-210ENST00000493727 VMACQ2NL98 169 aa11.11□□□□□ -0.63
UPF3A-210ENST00000493727 DCST2Q5T1A1 773 aa11.11□□□□□ -0.63
UPF3A-210ENST00000493727 INTS11Q5TA45 600 aaKnown RBP11.11□□□□□ -0.63
UPF3A-210ENST00000493727 SLC25A25Q6KCM7 469 aa11.11□□□□□ -0.63
UPF3A-210ENST00000493727 Q6ZPB1 254 aaPredicted RBP11.11□□□□□ -0.63
UPF3A-210ENST00000493727 NET1Q7Z628 596 aaPredicted RBP11.11□□□□□ -0.63
UPF3A-210ENST00000493727 RPS19BP1Q86WX3 136 aaKnown RBP11.11□□□□□ -0.63
UPF3A-210ENST00000493727 PTOV1Q86YD1 416 aa11.11□□□□□ -0.63
UPF3A-210ENST00000493727 SPPL2CQ8IUH8 684 aa11.11□□□□□ -0.63
UPF3A-210ENST00000493727 GHDCQ8N2G8 530 aa11.11□□□□□ -0.63
UPF3A-210ENST00000493727 AMER2Q8N7J2 671 aa11.11□□□□□ -0.63
UPF3A-210ENST00000493727 HIPK4Q8NE63 616 aa11.11□□□□□ -0.63
UPF3A-210ENST00000493727 SLC22A8Q8TCC7 542 aa11.11□□□□□ -0.63
UPF3A-210ENST00000493727 FIG4Q92562 907 aa11.11□□□□□ -0.63
UPF3A-210ENST00000493727 FAM162AQ96A26 154 aa11.11□□□□□ -0.63
UPF3A-210ENST00000493727 ADIPOR1Q96A54 375 aa11.11□□□□□ -0.63
UPF3A-210ENST00000493727 HSPBAP1Q96EW2 488 aa11.11□□□□□ -0.63
UPF3A-210ENST00000493727 TMEM19Q96HH6 336 aa11.11□□□□□ -0.63
UPF3A-210ENST00000493727 SIGLEC12Q96PQ1 595 aa11.11□□□□□ -0.63
UPF3A-210ENST00000493727 TRIM15Q9C019 465 aa11.11□□□□□ -0.63
UPF3A-210ENST00000493727 CDCP1Q9H5V8 836 aa11.11□□□□□ -0.63
UPF3A-210ENST00000493727 TMEM38AQ9H6F2 299 aa11.11□□□□□ -0.63
UPF3A-210ENST00000493727 GIN1Q9NXP7 522 aa11.11□□□□□ -0.63
UPF3A-210ENST00000493727 CALML5Q9NZT1 146 aa11.11□□□□□ -0.63
UPF3A-210ENST00000493727 CD300AQ9UGN4 299 aa11.11□□□□□ -0.63
UPF3A-210ENST00000493727 MAGEL2Q9UJ55 1249 aa11.11□□□□□ -0.63
UPF3A-210ENST00000493727 SH3BGRL2Q9UJC5 107 aa11.11□□□□□ -0.63
UPF3A-210ENST00000493727 CBLCQ9ULV8 474 aa11.11□□□□□ -0.63
UPF3A-210ENST00000493727 USP22Q9UPT9 525 aa11.11□□□□□ -0.63
UPF3A-210ENST00000493727 LIPT1Q9Y234 373 aa11.11□□□□□ -0.63
UPF3A-210ENST00000493727 ZNF835Q9Y2P0 537 aa11.11□□□□□ -0.63
UPF3A-210ENST00000493727 GPR55Q9Y2T6 319 aaPredicted RBP11.11□□□□□ -0.63
UPF3A-210ENST00000493727 POLR3KQ9Y2Y1 108 aaPredicted RBP11.11□□□□□ -0.63
UPF3A-210ENST00000493727 CORINQ9Y5Q5 1042 aa11.11□□□□□ -0.63
UPF3A-210ENST00000493727 KCNE3Q9Y6H6 103 aa11.11□□□□□ -0.63
UPF3A-210ENST00000493727 NUP214P35658 2090 aaPredicted RBP11.1□□□□□ -0.63
UPF3A-210ENST00000493727 KIAA1324LA8MWY0 1029 aaPredicted RBP11.1□□□□□ -0.63
UPF3A-210ENST00000493727 ANKRD65E5RJM6 399 aa11.1□□□□□ -0.63
UPF3A-210ENST00000493727 NPIPA5E9PKD4 350 aa11.1□□□□□ -0.63
UPF3A-210ENST00000493727 WWP2O00308 870 aa11.1□□□□□ -0.63
UPF3A-210ENST00000493727 CXCR6O00574 342 aa11.1□□□□□ -0.63
UPF3A-210ENST00000493727 HS6ST1O60243 411 aa11.1□□□□□ -0.63
UPF3A-210ENST00000493727 SLC25A12O75746 678 aa11.1□□□□□ -0.63
UPF3A-210ENST00000493727 CT45A8P0DMV1 189 aa11.1□□□□□ -0.63
UPF3A-210ENST00000493727 CT45A9P0DMV2 189 aa11.1□□□□□ -0.63
UPF3A-210ENST00000493727 COX6B1P14854 86 aa11.1□□□□□ -0.63
UPF3A-210ENST00000493727 NCK1P16333 377 aa11.1□□□□□ -0.63
UPF3A-210ENST00000493727 DRD5P21918 477 aa11.1□□□□□ -0.63
UPF3A-210ENST00000493727 AQP1P29972 269 aa11.1□□□□□ -0.63
UPF3A-210ENST00000493727 MSX2P35548 267 aaPredicted RBP11.1□□□□□ -0.63
UPF3A-210ENST00000493727 CYB561P49447 251 aa11.1□□□□□ -0.63
UPF3A-210ENST00000493727 GZMMP51124 257 aa11.1□□□□□ -0.63
UPF3A-210ENST00000493727 PSMD4P55036 377 aaKnown RBP11.1□□□□□ -0.63
UPF3A-210ENST00000493727 MRPS22P82650 360 aaKnown RBP11.1□□□□□ -0.63
UPF3A-210ENST00000493727 SYPL1Q16563 259 aa11.1□□□□□ -0.63
UPF3A-210ENST00000493727 C3AR1Q16581 482 aa11.1□□□□□ -0.63
UPF3A-210ENST00000493727 CYP27C1Q4G0S4 372 aa11.1□□□□□ -0.63
UPF3A-210ENST00000493727 LRRC23Q53EV4 343 aaPredicted RBP11.1□□□□□ -0.63
UPF3A-210ENST00000493727 CT45A2Q5DJT8 189 aa11.1□□□□□ -0.63
UPF3A-210ENST00000493727 CCNJQ5T5M9 372 aa11.1□□□□□ -0.63
UPF3A-210ENST00000493727 SPINK14Q6IE38 97 aa11.1□□□□□ -0.63
UPF3A-210ENST00000493727 REEP3Q6NUK4 255 aa11.1□□□□□ -0.63
UPF3A-210ENST00000493727 FAM214BQ7L5A3 538 aa11.1□□□□□ -0.63
UPF3A-210ENST00000493727 GALNTL5Q7Z4T8 443 aa11.1□□□□□ -0.63
UPF3A-210ENST00000493727 PRR22Q8IZ63 422 aa11.1□□□□□ -0.63
UPF3A-210ENST00000493727 METTL25Q8N6Q8 603 aa11.1□□□□□ -0.63
UPF3A-210ENST00000493727 ANKFN1Q8N957 763 aa11.1□□□□□ -0.63
UPF3A-210ENST00000493727 POGLUT1Q8NBL1 392 aa11.1□□□□□ -0.63
UPF3A-210ENST00000493727 C17orf47Q8NEP4 570 aa11.1□□□□□ -0.63
UPF3A-210ENST00000493727 OR4N2Q8NGD1 307 aa11.1□□□□□ -0.63
UPF3A-210ENST00000493727 BBS10Q8TAM1 723 aa11.1□□□□□ -0.63
UPF3A-210ENST00000493727 SLC38A5Q8WUX1 472 aa11.1□□□□□ -0.63
UPF3A-210ENST00000493727 TMBIM1Q969X1 311 aa11.1□□□□□ -0.63
UPF3A-210ENST00000493727 LRGUKQ96M69 825 aa11.1□□□□□ -0.63
UPF3A-210ENST00000493727 TRNT1Q96Q11 434 aaKnown RBP11.1□□□□□ -0.63
UPF3A-210ENST00000493727 G6PC3Q9BUM1 346 aa11.1□□□□□ -0.63
UPF3A-210ENST00000493727 MUC13Q9H3R2 512 aa11.1□□□□□ -0.63
UPF3A-210ENST00000493727 TRIM45Q9H8W5 580 aaPredicted RBP11.1□□□□□ -0.63
UPF3A-210ENST00000493727 LIN28AQ9H9Z2 209 aaKnown RBP11.1□□□□□ -0.63
UPF3A-210ENST00000493727 ANKRD10Q9NXR5 420 aa11.1□□□□□ -0.63
UPF3A-210ENST00000493727 NPIPA1Q9UND3 350 aa11.1□□□□□ -0.63
UPF3A-210ENST00000493727 WDR45Q9Y484 360 aa11.1□□□□□ -0.63
UPF3A-210ENST00000493727 SNX13Q9Y5W8 968 aa11.1□□□□□ -0.63
UPF3A-210ENST00000493727 NME2P1O60361 137 aa11.09□□□□□ -0.63
UPF3A-210ENST00000493727 STX11O75558 287 aa11.09□□□□□ -0.63
UPF3A-210ENST00000493727 REM1O75628 298 aa11.09□□□□□ -0.63
UPF3A-210ENST00000493727 NEURL1O76050 574 aa11.09□□□□□ -0.63
UPF3A-210ENST00000493727 PDE9AO76083 593 aa11.09□□□□□ -0.63
UPF3A-210ENST00000493727 KCNK2O95069 426 aa11.09□□□□□ -0.63
UPF3A-210ENST00000493727 H6PDO95479 791 aa11.09□□□□□ -0.63
UPF3A-210ENST00000493727 CHRM4P08173 479 aa11.09□□□□□ -0.63
UPF3A-210ENST00000493727 TFPTP0C1Z6 253 aa11.09□□□□□ -0.63
UPF3A-210ENST00000493727 ABOP16442 354 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms