RNA–Protein interactions for RNA: ENST00000493609.1

SMG7-208, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG7, Length 624 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-208ENST00000493609 SERAC1Q96JX3 654 aa4.33□□□□□ -1.72
SMG7-208ENST00000493609 SIGLEC12Q96PQ1 595 aa4.33□□□□□ -1.72
SMG7-208ENST00000493609 KCNK16Q96T55 309 aa4.33□□□□□ -1.72
SMG7-208ENST00000493609 TNFRSF19Q9NS68 423 aa4.33□□□□□ -1.72
SMG7-208ENST00000493609 EXOSC1Q9Y3B2 195 aaKnown RBP4.33□□□□□ -1.72
SMG7-208ENST00000493609 FOCADQ5VW36 1801 aa4.32□□□□□ -1.72
SMG7-208ENST00000493609 DUSP14O95147 198 aaKnown RBP4.32□□□□□ -1.72
SMG7-208ENST00000493609 IGFBP1P08833 259 aaPredicted RBP4.32□□□□□ -1.72
SMG7-208ENST00000493609 ANXA4P09525 319 aaPredicted RBP4.32□□□□□ -1.72
SMG7-208ENST00000493609 RRASP10301 218 aa4.32□□□□□ -1.72
SMG7-208ENST00000493609 KLK2P20151 261 aa4.32□□□□□ -1.72
SMG7-208ENST00000493609 MX1P20591 662 aa4.32□□□□□ -1.72
SMG7-208ENST00000493609 DNAJB1P25685 340 aa4.32□□□□□ -1.72
SMG7-208ENST00000493609 PUDPQ08623 228 aa4.32□□□□□ -1.72
SMG7-208ENST00000493609 EXOSC2Q13868 293 aaKnown RBP4.32□□□□□ -1.72
SMG7-208ENST00000493609 TFDP1Q14186 410 aa4.32□□□□□ -1.72
SMG7-208ENST00000493609 SLC15A2Q16348 729 aa4.32□□□□□ -1.72
SMG7-208ENST00000493609 ADPRMQ3LIE5 342 aa4.32□□□□□ -1.72
SMG7-208ENST00000493609 RNF212Q495C1 297 aa4.32□□□□□ -1.72
SMG7-208ENST00000493609 UTF1Q5T230 341 aa4.32□□□□□ -1.72
SMG7-208ENST00000493609 LPCAT2Q7L5N7 544 aa4.32□□□□□ -1.72
SMG7-208ENST00000493609 VPS36Q86VN1 386 aa4.32□□□□□ -1.72
SMG7-208ENST00000493609 PARGQ86W56 976 aa4.32□□□□□ -1.72
SMG7-208ENST00000493609 ZNF584Q8IVC4 421 aa4.32□□□□□ -1.72
SMG7-208ENST00000493609 BCORP1Q8N888 145 aa4.32□□□□□ -1.72
SMG7-208ENST00000493609 TFB1MQ8WVM0 346 aaKnown RBP4.32□□□□□ -1.72
SMG7-208ENST00000493609 DEFB126Q9BYW3 111 aa4.32□□□□□ -1.72
SMG7-208ENST00000493609 IKZF5Q9H5V7 419 aa4.32□□□□□ -1.72
SMG7-208ENST00000493609 MIEF1Q9NQG6 463 aa4.32□□□□□ -1.72
SMG7-208ENST00000493609 C1orf123Q9NWV4 160 aa4.32□□□□□ -1.72
SMG7-208ENST00000493609 ELOVL2Q9NXB9 296 aa4.32□□□□□ -1.72
SMG7-208ENST00000493609 TRMT112Q9UI30 125 aaKnown RBP4.32□□□□□ -1.72
SMG7-208ENST00000493609 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.32□□□□□ -1.72
SMG7-208ENST00000493609 CACNA1SQ13698 1873 aa4.32□□□□□ -1.72
SMG7-208ENST00000493609 FER1L6Q2WGJ9 1857 aa4.32□□□□□ -1.72
SMG7-208ENST00000493609 LAMB1P07942 1786 aa4.32□□□□□ -1.72
SMG7-208ENST00000493609 MED23Q9ULK4 1368 aa4.31□□□□□ -1.72
SMG7-208ENST00000493609 GRIN2DO15399 1336 aa4.31□□□□□ -1.72
SMG7-208ENST00000493609 FAM230AA0A1W2PPH8 454 aa4.31□□□□□ -1.72
SMG7-208ENST00000493609 HIP1O00291 1037 aa4.31□□□□□ -1.72
SMG7-208ENST00000493609 SLC17A2O00624 439 aa4.31□□□□□ -1.72
SMG7-208ENST00000493609 CASKO14936 926 aa4.31□□□□□ -1.72
SMG7-208ENST00000493609 PPIHO43447 177 aaKnown RBP4.31□□□□□ -1.72
SMG7-208ENST00000493609 TOM1L1O75674 476 aa4.31□□□□□ -1.72
SMG7-208ENST00000493609 SURF6O75683 361 aaKnown RBP4.31□□□□□ -1.72
SMG7-208ENST00000493609 NOL4O94818 638 aa4.31□□□□□ -1.72
SMG7-208ENST00000493609 APBB3O95704 486 aa4.31□□□□□ -1.72
SMG7-208ENST00000493609 CA3P07451 260 aa4.31□□□□□ -1.72
SMG7-208ENST00000493609 ARF4P18085 180 aaPredicted RBP4.31□□□□□ -1.72
SMG7-208ENST00000493609 RFC4P35249 363 aa4.31□□□□□ -1.72
SMG7-208ENST00000493609 ASAH1Q13510 395 aa4.31□□□□□ -1.72
SMG7-208ENST00000493609 SERTAD2Q14140 314 aa4.31□□□□□ -1.72
SMG7-208ENST00000493609 TGIF1Q15583 401 aa4.31□□□□□ -1.72
SMG7-208ENST00000493609 CCDC57Q2TAC2 916 aa4.31□□□□□ -1.72
SMG7-208ENST00000493609 PAN3Q58A45 887 aaKnown RBP4.31□□□□□ -1.72
SMG7-208ENST00000493609 C2orf66Q6UXQ4 117 aa4.31□□□□□ -1.72
SMG7-208ENST00000493609 ERASQ7Z444 233 aa4.31□□□□□ -1.72
SMG7-208ENST00000493609 SYVN1Q86TM6 617 aa4.31□□□□□ -1.72
SMG7-208ENST00000493609 SPEM1Q8N4L4 309 aa4.31□□□□□ -1.72
SMG7-208ENST00000493609 CERS5Q8N5B7 392 aa4.31□□□□□ -1.72
SMG7-208ENST00000493609 ELMO2Q96JJ3 720 aa4.31□□□□□ -1.72
SMG7-208ENST00000493609 CASD1Q96PB1 797 aa4.31□□□□□ -1.72
SMG7-208ENST00000493609 OR5M11Q96RB7 305 aa4.31□□□□□ -1.72
SMG7-208ENST00000493609 TM2D1Q9BX74 207 aa4.31□□□□□ -1.72
SMG7-208ENST00000493609 RPAP3Q9H6T3 665 aaPredicted RBP4.31□□□□□ -1.72
SMG7-208ENST00000493609 DUSP12Q9UNI6 340 aa4.31□□□□□ -1.72
SMG7-208ENST00000493609 FOXJ3Q9UPW0 622 aa4.31□□□□□ -1.72
SMG7-208ENST00000493609 DICER1Q9UPY3 1922 aaKnown RBP4.31□□□□□ -1.72
SMG7-208ENST00000493609 ECM29Q5VYK3 1845 aa4.3□□□□□ -1.72
SMG7-208ENST00000493609 ANKRD30BLA7E2S9 258 aa4.3□□□□□ -1.72
SMG7-208ENST00000493609 TM9SF1O15321 606 aa4.3□□□□□ -1.72
SMG7-208ENST00000493609 JCHAINP01591 159 aa4.3□□□□□ -1.72
SMG7-208ENST00000493609 PTBP1P26599 531 aaKnown RBP eCLIP4.3□□□□□ -1.721e-10■■■■■ 54
SMG7-208ENST00000493609 XCR1P46094 333 aa4.3□□□□□ -1.72
SMG7-208ENST00000493609 BPIFB3P59826 476 aa4.3□□□□□ -1.72
SMG7-208ENST00000493609 CDKN3Q16667 212 aa4.3□□□□□ -1.72
SMG7-208ENST00000493609 QRICH1Q2TAL8 776 aa4.3□□□□□ -1.72
SMG7-208ENST00000493609 MEDAGQ5VYS4 303 aa4.3□□□□□ -1.72
SMG7-208ENST00000493609 ZNF57Q68EA5 555 aaPredicted RBP4.3□□□□□ -1.72
SMG7-208ENST00000493609 NBPF5PQ86XG9 351 aaPredicted RBP4.3□□□□□ -1.72
SMG7-208ENST00000493609 MCOLN2Q8IZK6 566 aa4.3□□□□□ -1.72
SMG7-208ENST00000493609 CCDC26Q8TAB7 109 aa4.3□□□□□ -1.72
SMG7-208ENST00000493609 SELENOMQ8WWX9 145 aa4.3□□□□□ -1.72
SMG7-208ENST00000493609 TBC1D10AQ9BXI6 508 aa4.3□□□□□ -1.72
SMG7-208ENST00000493609 ELOVL4Q9GZR5 314 aa4.3□□□□□ -1.72
SMG7-208ENST00000493609 SLITRK2Q9H156 845 aa4.3□□□□□ -1.72
SMG7-208ENST00000493609 OPN3Q9H1Y3 402 aaPredicted RBP4.3□□□□□ -1.72
SMG7-208ENST00000493609 VAT1LQ9HCJ6 419 aa4.3□□□□□ -1.72
SMG7-208ENST00000493609 EXOSC3Q9NQT5 275 aaKnown RBP4.3□□□□□ -1.72
SMG7-208ENST00000493609 ZNF275Q9NSD4 429 aaPredicted RBP4.3□□□□□ -1.72
SMG7-208ENST00000493609 CHD4Q14839 1912 aa4.3□□□□□ -1.72
SMG7-208ENST00000493609 ADAMTS9Q9P2N4 1935 aa4.3□□□□□ -1.72
SMG7-208ENST00000493609 RPAP1Q9BWH6 1393 aaPredicted RBP4.29□□□□□ -1.72
SMG7-208ENST00000493609 CDK5RAP2Q96SN8 1893 aa4.29□□□□□ -1.72
SMG7-208ENST00000493609 MYO5AQ9Y4I1 1855 aaKnown RBP4.29□□□□□ -1.72
SMG7-208ENST00000493609 A0A0U1RQV5 110 aa4.29□□□□□ -1.72
SMG7-208ENST00000493609 AKR7A3O95154 331 aa4.29□□□□□ -1.72
SMG7-208ENST00000493609 UQCRFS1P1P0C7P4 283 aa4.29□□□□□ -1.72
SMG7-208ENST00000493609 PAICSP22234 425 aaKnown RBP4.29□□□□□ -1.72
SMG7-208ENST00000493609 MEOX2P50222 304 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms