RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 SPATA13Q96N96 652 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 LYSMD1Q96S90 227 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 CCNL2Q96S94 520 aaPredicted RBP2.64□□□□□ -1.99
PTCD3-218ENST00000493430 NDNQ99608 321 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 BARD1Q99728 777 aaKnown RBP2.64□□□□□ -1.99
PTCD3-218ENST00000493430 BAG1Q99933 345 aaPredicted RBP2.64□□□□□ -1.99
PTCD3-218ENST00000493430 CHCHD6Q9BRQ6 235 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 ACAT2Q9BWD1 397 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 AP1M1Q9BXS5 423 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 MAK16Q9BXY0 300 aaKnown RBP2.64□□□□□ -1.99
PTCD3-218ENST00000493430 ULBP3Q9BZM4 244 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 CARD9Q9H257 536 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 OR52A5Q9H2C5 316 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 ACTL8Q9H568 366 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 GPN2Q9H9Y4 310 aaPredicted RBP2.64□□□□□ -1.99
PTCD3-218ENST00000493430 ACKR4Q9NPB9 350 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 ZNHIT6Q9NWK9 470 aaKnown RBP2.64□□□□□ -1.99
PTCD3-218ENST00000493430 SOHLH2Q9NX45 425 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 NSMCE4AQ9NXX6 385 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 NKIRAS2Q9NYR9 191 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 DHCR7Q9UBM7 475 aaKnown RBP2.64□□□□□ -1.99
PTCD3-218ENST00000493430 AASSQ9UDR5 926 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 FAM153AQ9UHL3 310 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 SLC24A2Q9UI40 661 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 APPL1Q9UKG1 709 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 PILRAQ9UKJ1 303 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 IKZF3Q9UKT9 509 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 PYCARDQ9ULZ3 195 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 TDRKHQ9Y2W6 561 aaKnown RBP2.64□□□□□ -1.99
PTCD3-218ENST00000493430 NBPF19A0A087WUL8 3843 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 RAI1Q7Z5J4 1906 aaPredicted RBP2.64□□□□□ -1.99
PTCD3-218ENST00000493430 RELNP78509 3460 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 LRRK2Q5S007 2527 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 IGHV3-20A0A0C4DH32 117 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 A0A1W2PPH5 198 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 ZNF860A6NHJ4 632 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 AGAP14A8MT82 685 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 TMEM150CB9EJG8 249 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 C4orf51C9J302 202 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 APOC4-APOC2K7ER74 178 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 P2RX6O15547 441 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 PLOD3O60568 738 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 DNAJB6O75190 326 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 GPC4O75487 556 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 SPAG6O75602 509 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 NXPH2O95156 264 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 APOC2P02655 101 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 CAPN1P07384 714 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 UGT2B7P16662 529 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 ZNF30P17039 623 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 DESP17661 470 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 HLA-DPA1P20036 260 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 EFNA1P20827 205 aaPredicted RBP2.63□□□□□ -1.99
PTCD3-218ENST00000493430 MAGP20916 626 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 MSNP26038 577 aaKnown RBP2.63□□□□□ -1.99
PTCD3-218ENST00000493430 ACADLP28330 430 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 CCR7P32248 378 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 CYLC1P35663 651 aaPredicted RBP2.63□□□□□ -1.99
PTCD3-218ENST00000493430 OR1D4P47884 311 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 GPR143P51810 404 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 CASP6P55212 293 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 DCDC1P59894 354 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 ERVPABLB-1P60509 514 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 POLR2LP62875 67 aaKnown RBP2.63□□□□□ -1.99
PTCD3-218ENST00000493430 BASP1P80723 227 aaKnown RBP2.63□□□□□ -1.99
PTCD3-218ENST00000493430 MAT1AQ00266 395 aaKnown RBP2.63□□□□□ -1.99
PTCD3-218ENST00000493430 KCNJ11Q14654 390 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 FASTKD3Q14CZ7 662 aaKnown RBP2.63□□□□□ -1.99
PTCD3-218ENST00000493430 SPA17Q15506 151 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 TRADDQ15628 312 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 KYNUQ16719 465 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 C18orf21Q32NC0 220 aaPredicted RBP2.63□□□□□ -1.99
PTCD3-218ENST00000493430 ODF2Q5BJF6 829 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 WLSQ5T9L3 541 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 FRMPD2BQ6IN97 320 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 CYP20A1Q6UW02 462 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 CDHR3Q6ZTQ4 885 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 COX15Q7KZN9 410 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 PRSS41Q7RTY9 318 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 GALNT5Q7Z7M9 940 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 AMZ2Q86W34 360 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 SLC13A5Q86YT5 568 aaPredicted RBP2.63□□□□□ -1.99
PTCD3-218ENST00000493430 CDKL3Q8IVW4 592 aaPredicted RBP2.63□□□□□ -1.99
PTCD3-218ENST00000493430 SLC35F6Q8N357 371 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 OTUD6BQ8N6M0 293 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 LSMEM1Q8N8F7 131 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 PRELID2Q8N945 189 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 OR4D9Q8NGE8 314 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 OR1J1Q8NGS3 322 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 DOK4Q8TEW6 326 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 ELMO1Q92556 727 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 DAZLQ92904 295 aaKnown RBP2.63□□□□□ -1.99
PTCD3-218ENST00000493430 MR1Q95460 341 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 C8orf44Q96CB5 159 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 CAPZA3Q96KX2 299 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 SGK494Q96LW2 274 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 KRT12Q99456 494 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 NUDT9Q9BW91 350 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 STRADBQ9C0K7 418 aa2.63□□□□□ -1.99
PTCD3-218ENST00000493430 DDX47Q9H0S4 455 aaKnown RBP2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms