RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 H0YHG0 523 aa12.24□□□□□ -0.45
MSH6-208ENST00000493177 TFECO14948 347 aaPredicted RBP12.24□□□□□ -0.45
MSH6-208ENST00000493177 GMFGO60234 142 aa12.24□□□□□ -0.45
MSH6-208ENST00000493177 LDLRP01130 860 aa12.24□□□□□ -0.45
MSH6-208ENST00000493177 FESP07332 822 aa12.24□□□□□ -0.45
MSH6-208ENST00000493177 UBTFL6P0CB48 400 aaPredicted RBP12.24□□□□□ -0.45
MSH6-208ENST00000493177 UBL4AP11441 157 aa12.24□□□□□ -0.45
MSH6-208ENST00000493177 ABOP16442 354 aa12.24□□□□□ -0.45
MSH6-208ENST00000493177 ENDOUP21128 410 aaKnown RBP12.24□□□□□ -0.45
MSH6-208ENST00000493177 CASP3P42574 277 aa12.24□□□□□ -0.45
MSH6-208ENST00000493177 MASP1P48740 699 aa12.24□□□□□ -0.45
MSH6-208ENST00000493177 MEOX1P50221 254 aa12.24□□□□□ -0.45
MSH6-208ENST00000493177 CCR4P51679 360 aa12.24□□□□□ -0.45
MSH6-208ENST00000493177 EEF1A1P68104 462 aaKnown RBP12.24□□□□□ -0.45
MSH6-208ENST00000493177 CCNIQ14094 377 aa12.24□□□□□ -0.45
MSH6-208ENST00000493177 CD226Q15762 336 aa12.24□□□□□ -0.45
MSH6-208ENST00000493177 ZSWIM7Q19AV6 140 aa12.24□□□□□ -0.45
MSH6-208ENST00000493177 NDUFAF6Q330K2 333 aa12.24□□□□□ -0.45
MSH6-208ENST00000493177 GLIPR1L2Q4G1C9 344 aa12.24□□□□□ -0.45
MSH6-208ENST00000493177 IFI44LQ53G44 452 aa12.24□□□□□ -0.45
MSH6-208ENST00000493177 RNF220Q5VTB9 566 aa12.24□□□□□ -0.45
MSH6-208ENST00000493177 AP1ARQ63HQ0 302 aa12.24□□□□□ -0.45
MSH6-208ENST00000493177 ZNF324BQ6AW86 544 aaPredicted RBP12.24□□□□□ -0.45
MSH6-208ENST00000493177 SLC30A6Q6NXT4 461 aa12.24□□□□□ -0.45
MSH6-208ENST00000493177 APOOLQ6UXV4 268 aa12.24□□□□□ -0.45
MSH6-208ENST00000493177 EML6Q6ZMW3 1958 aa12.24□□□□□ -0.45
MSH6-208ENST00000493177 VTCN1Q7Z7D3 282 aa12.24□□□□□ -0.45
MSH6-208ENST00000493177 MISPQ8IVT2 679 aa12.24□□□□□ -0.45
MSH6-208ENST00000493177 CMIPQ8IY22 773 aa12.24□□□□□ -0.45
MSH6-208ENST00000493177 CLIP4Q8N3C7 705 aa12.24□□□□□ -0.45
MSH6-208ENST00000493177 PSD4Q8NDX1 1056 aa12.24□□□□□ -0.45
MSH6-208ENST00000493177 GPR32P1Q8NGA4 272 aa12.24□□□□□ -0.45
MSH6-208ENST00000493177 VANGL1Q8TAA9 524 aaPredicted RBP12.24□□□□□ -0.45
MSH6-208ENST00000493177 SLC47A1Q96FL8 570 aa12.24□□□□□ -0.45
MSH6-208ENST00000493177 SH3YL1Q96HL8 342 aaPredicted RBP12.24□□□□□ -0.45
MSH6-208ENST00000493177 PYURFQ96I23 114 aa12.24□□□□□ -0.45
MSH6-208ENST00000493177 JSRP1Q96MG2 331 aaPredicted RBP12.24□□□□□ -0.45
MSH6-208ENST00000493177 FRMD6Q96NE9 622 aa12.24□□□□□ -0.45
MSH6-208ENST00000493177 SPENQ96T58 3664 aaKnown RBP12.24□□□□□ -0.45
MSH6-208ENST00000493177 DOHHQ9BU89 302 aa12.24□□□□□ -0.45
MSH6-208ENST00000493177 UGT2B28Q9BY64 529 aa12.24□□□□□ -0.45
MSH6-208ENST00000493177 DENND2DQ9H6A0 471 aaPredicted RBP12.24□□□□□ -0.45
MSH6-208ENST00000493177 SH2D2AQ9NP31 389 aa12.24□□□□□ -0.45
MSH6-208ENST00000493177 RLIMQ9NVW2 624 aa12.24□□□□□ -0.45
MSH6-208ENST00000493177 PPP4R1LQ9P1A2 415 aa12.24□□□□□ -0.45
MSH6-208ENST00000493177 AURKCQ9UQB9 309 aa12.24□□□□□ -0.45
MSH6-208ENST00000493177 SLC35A3Q9Y2D2 325 aa12.24□□□□□ -0.45
MSH6-208ENST00000493177 SH3GLB1Q9Y371 365 aa12.24□□□□□ -0.45
MSH6-208ENST00000493177 EXPH5Q8NEV8 1989 aa12.23□□□□□ -0.45
MSH6-208ENST00000493177 TCRBV5S2A0A599 114 aa12.23□□□□□ -0.45
MSH6-208ENST00000493177 DHRS12A0PJE2 317 aa12.23□□□□□ -0.45
MSH6-208ENST00000493177 M0R3H8 397 aa12.23□□□□□ -0.45
MSH6-208ENST00000493177 SYT5O00445 386 aa12.23□□□□□ -0.45
MSH6-208ENST00000493177 CCL21O00585 134 aa12.23□□□□□ -0.45
MSH6-208ENST00000493177 ZNF264O43296 627 aa12.23□□□□□ -0.45
MSH6-208ENST00000493177 FRS3O43559 492 aa12.23□□□□□ -0.45
MSH6-208ENST00000493177 HCRTR2O43614 444 aa12.23□□□□□ -0.45
MSH6-208ENST00000493177 CDC40O60508 579 aaKnown RBP eCLIP12.23□□□□□ -0.45
MSH6-208ENST00000493177 RNF224P0DH78 156 aa12.23□□□□□ -0.45
MSH6-208ENST00000493177 TNFRSF1BP20333 461 aa12.23□□□□□ -0.45
MSH6-208ENST00000493177 PSMA4P25789 261 aaKnown RBP12.23□□□□□ -0.45
MSH6-208ENST00000493177 GPR85P60893 370 aa12.23□□□□□ -0.45
MSH6-208ENST00000493177 ACTR3P61158 418 aa12.23□□□□□ -0.45
MSH6-208ENST00000493177 PLGLB1Q02325 96 aa12.23□□□□□ -0.45
MSH6-208ENST00000493177 CHRNB3Q05901 458 aa12.23□□□□□ -0.45
MSH6-208ENST00000493177 SNTA1Q13424 505 aa12.23□□□□□ -0.45
MSH6-208ENST00000493177 FAM98BQ52LJ0 330 aaKnown RBP12.23□□□□□ -0.45
MSH6-208ENST00000493177 KRTCAP3Q53RY4 240 aa12.23□□□□□ -0.45
MSH6-208ENST00000493177 TBCELQ5QJ74 424 aa12.23□□□□□ -0.45
MSH6-208ENST00000493177 MAMDC2Q7Z304 686 aaPredicted RBP12.23□□□□□ -0.45
MSH6-208ENST00000493177 ZNF227Q86WZ6 799 aa12.23□□□□□ -0.45
MSH6-208ENST00000493177 CARM1Q86X55 608 aa12.23□□□□□ -0.45
MSH6-208ENST00000493177 FAM86B1Q8N7N1 296 aa12.23□□□□□ -0.45
MSH6-208ENST00000493177 DUSP19Q8WTR2 217 aa12.23□□□□□ -0.45
MSH6-208ENST00000493177 GEMIN6Q8WXD5 167 aaKnown RBP12.23□□□□□ -0.45
MSH6-208ENST00000493177 CNOT9Q92600 299 aaKnown RBP12.23□□□□□ -0.45
MSH6-208ENST00000493177 POP5Q969H6 163 aaKnown RBP12.23□□□□□ -0.45
MSH6-208ENST00000493177 GPR137Q96N19 417 aa12.23□□□□□ -0.45
MSH6-208ENST00000493177 ANGPTL4Q9BY76 406 aa12.23□□□□□ -0.45
MSH6-208ENST00000493177 RTN4RQ9BZR6 473 aa12.23□□□□□ -0.45
MSH6-208ENST00000493177 SLC9A8Q9Y2E8 581 aa12.23□□□□□ -0.45
MSH6-208ENST00000493177 CARD8Q9Y2G2 431 aa12.23□□□□□ -0.45
MSH6-208ENST00000493177 WIF1Q9Y5W5 379 aa12.23□□□□□ -0.45
MSH6-208ENST00000493177 UBR5O95071 2799 aaPredicted RBP12.22□□□□□ -0.45
MSH6-208ENST00000493177 TCRBV3S1A0A5B6 114 aa12.22□□□□□ -0.45
MSH6-208ENST00000493177 CDHR4A6H8M9 788 aa12.22□□□□□ -0.45
MSH6-208ENST00000493177 C17orf51A8MQB3 221 aa12.22□□□□□ -0.45
MSH6-208ENST00000493177 ACOT7O00154 380 aa12.22□□□□□ -0.45
MSH6-208ENST00000493177 GNB5O14775 395 aa12.22□□□□□ -0.45
MSH6-208ENST00000493177 PEX1O43933 1283 aa12.22□□□□□ -0.45
MSH6-208ENST00000493177 BCAS1O75363 584 aaPredicted RBP12.22□□□□□ -0.45
MSH6-208ENST00000493177 LGI1O95970 557 aa12.22□□□□□ -0.45
MSH6-208ENST00000493177 GPIP06744 558 aa12.22□□□□□ -0.45
MSH6-208ENST00000493177 C8BP07358 591 aa12.22□□□□□ -0.45
MSH6-208ENST00000493177 STSP08842 583 aa12.22□□□□□ -0.45
MSH6-208ENST00000493177 GKN3PP0CG01 181 aa12.22□□□□□ -0.45
MSH6-208ENST00000493177 UMPSP11172 480 aa12.22□□□□□ -0.45
MSH6-208ENST00000493177 CNR1P21554 472 aa12.22□□□□□ -0.45
MSH6-208ENST00000493177 RFC3P40938 356 aa12.22□□□□□ -0.45
MSH6-208ENST00000493177 PTGDSP41222 190 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms