RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 TBC1D3LB9A6J9 549 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 K7EP13 123 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 M0QYG6 137 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 M0QZ24 198 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 M0R082 166 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 CXCR6O00574 342 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 IMPA2O14732 288 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 AZIN1O14977 448 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 YY2O15391 372 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 AIREO43918 545 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 SHOX2O60902 331 aaPredicted RBP3.88□□□□□ -1.79
BRCA1-220ENST00000492859 CEACAM4O75871 244 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 TDP2O95551 362 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 ATP6V1G2O95670 118 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 ESRRBO95718 433 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 EFEMP2O95967 443 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 IGHA1P01876 353 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 FUCA1P04066 466 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 GAPDHP04406 335 aaKnown RBP3.88□□□□□ -1.79
BRCA1-220ENST00000492859 CYBBP04839 570 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 TBC1D3HP0C7X1 549 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 GTF2F2P13984 249 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 HGFP14210 728 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 GLB1P16278 677 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 BMP7P18075 431 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 PMCHP20382 165 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 GZMHP20718 246 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 EPHA1P21709 976 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 HTR2CP28335 458 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 GABRR2P28476 465 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 CA5AP35218 305 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 PMELP40967 661 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 OR3A1P47881 315 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 IDH3GP51553 393 aaPredicted RBP3.88□□□□□ -1.79
BRCA1-220ENST00000492859 ACLYP53396 1101 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 DLX5P56178 289 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 OR4D2P58180 307 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 TAS2R39P59534 338 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 SIRPAP78324 504 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 RPL19P84098 196 aaKnown RBP3.88□□□□□ -1.79
BRCA1-220ENST00000492859 IL5RAQ01344 420 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 NHLH2Q02577 135 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 ROM1Q03395 351 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 ZNF91Q05481 1191 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 FPGSQ05932 587 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 DLG1Q12959 904 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 HSPB3Q12988 150 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 GRIK2Q13002 908 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 GRB14Q14449 540 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 IL13RA2Q14627 380 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 PTGES3Q15185 160 aaKnown RBP3.88□□□□□ -1.79
BRCA1-220ENST00000492859 OR2B11Q5JQS5 317 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 LIPKQ5VXJ0 399 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 FBXW9Q5XUX1 488 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 SAXO2Q658L1 398 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 BICRALQ6AI39 1079 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 TBC1D3GQ6DHY5 549 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 OR4F3Q6IEY1 312 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 TBC1D3CQ6IPX1 549 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 LPCAT3Q6P1A2 487 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 BTNL8Q6UX41 500 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 SPNS3Q6ZMD2 512 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 DPY19L2P2Q6ZN68 376 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 TMED4Q7Z7H5 227 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 ZNF589Q86UQ0 364 aaPredicted RBP3.88□□□□□ -1.79
BRCA1-220ENST00000492859 TMEM25Q86YD3 366 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 TMPRSS6Q8IU80 811 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 SMYD4Q8IYR2 804 aaPredicted RBP3.88□□□□□ -1.79
BRCA1-220ENST00000492859 TBC1D3Q8IZP1 549 aaPredicted RBP3.88□□□□□ -1.79
BRCA1-220ENST00000492859 FGFRL1Q8N441 504 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 TMEM199Q8N511 208 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 SLC5A8Q8N695 610 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 NANOGP1Q8N7R0 232 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 SIDT2Q8NBJ9 832 aaKnown RBP3.88□□□□□ -1.79
BRCA1-220ENST00000492859 SLC38A9Q8NBW4 561 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 TMEM161BQ8NDZ6 487 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 SEMA6DQ8NFY4 1073 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 OR52H1Q8NGJ2 320 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 OR4Q3Q8NH05 313 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 OR52E5Q8NH55 327 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 OR51A7Q8NH64 312 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 MBD3L2Q8NHZ7 208 aaPredicted RBP3.88□□□□□ -1.79
BRCA1-220ENST00000492859 ZNF417Q8TAU3 575 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 GIPC3Q8TF64 312 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 U2AF1L4Q8WU68 220 aaKnown RBP3.88□□□□□ -1.79
BRCA1-220ENST00000492859 SDR42E1Q8WUS8 393 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 ATOH1Q92858 354 aaPredicted RBP3.88□□□□□ -1.79
BRCA1-220ENST00000492859 IGSF8Q969P0 613 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 SMIM12Q96EX1 92 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 CCDC120Q96HB5 630 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 HSPA12BQ96MM6 686 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 ZFP3Q96NJ6 502 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 TGM7Q96PF1 710 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 SORCS2Q96PQ0 1159 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 NACC1Q96RE7 527 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 ZNF587Q96SQ5 575 aaPredicted RBP3.88□□□□□ -1.79
BRCA1-220ENST00000492859 FOXB1Q99853 325 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 DPH7Q9BTV6 452 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 GGACTQ9BVM4 153 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 AMBRA1Q9C0C7 1298 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms