RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 RSBN1Q5VWQ0 802 aaPredicted RBP8.68□□□□□ -1.02
BRCA1-219ENST00000491747 NOXRED1Q6NXP6 359 aa8.68□□□□□ -1.02
BRCA1-219ENST00000491747 PTOV1Q86YD1 416 aa8.68□□□□□ -1.02
BRCA1-219ENST00000491747 MMP21Q8N119 569 aa8.68□□□□□ -1.02
BRCA1-219ENST00000491747 DEPDC4Q8N2C3 294 aa8.68□□□□□ -1.02
BRCA1-219ENST00000491747 STX19Q8N4C7 294 aa8.68□□□□□ -1.02
BRCA1-219ENST00000491747 C1orf52Q8N6N3 182 aaKnown RBP8.68□□□□□ -1.02
BRCA1-219ENST00000491747 APCDD1LQ8NCL9 501 aa8.68□□□□□ -1.02
BRCA1-219ENST00000491747 FAM83FQ8NEG4 500 aaPredicted RBP8.68□□□□□ -1.02
BRCA1-219ENST00000491747 PTPMT1Q8WUK0 201 aaPredicted RBP8.68□□□□□ -1.02
BRCA1-219ENST00000491747 CHTF18Q8WVB6 975 aa8.68□□□□□ -1.02
BRCA1-219ENST00000491747 APIPQ96GX9 242 aa8.68□□□□□ -1.02
BRCA1-219ENST00000491747 NUAK2Q9H093 628 aa8.68□□□□□ -1.02
BRCA1-219ENST00000491747 NEK6Q9HC98 313 aa8.68□□□□□ -1.02
BRCA1-219ENST00000491747 NPAP1Q9NZP6 1156 aa8.68□□□□□ -1.02
BRCA1-219ENST00000491747 CORO2BQ9UQ03 480 aa8.68□□□□□ -1.02
BRCA1-219ENST00000491747 CFL2Q9Y281 166 aa8.68□□□□□ -1.02
BRCA1-219ENST00000491747 PCDHGB6Q9Y5F9 930 aa8.68□□□□□ -1.02
BRCA1-219ENST00000491747 ZNF462Q96JM2 2506 aa8.68□□□□□ -1.02
BRCA1-219ENST00000491747 LOC110117498-PIK3R3F6TDL0 507 aa8.68□□□□□ -1.02
BRCA1-219ENST00000491747 CCNKO75909 580 aa8.68□□□□□ -1.02
BRCA1-219ENST00000491747 AIFM1O95831 613 aa8.68□□□□□ -1.02
BRCA1-219ENST00000491747 COX7A2P14406 83 aa8.68□□□□□ -1.02
BRCA1-219ENST00000491747 TCEA1P23193 301 aaKnown RBP8.68□□□□□ -1.02
BRCA1-219ENST00000491747 PPIBP23284 216 aaKnown RBP8.68□□□□□ -1.02
BRCA1-219ENST00000491747 ETV6P41212 452 aa8.68□□□□□ -1.02
BRCA1-219ENST00000491747 IGLV3-21P80748 117 aaPredicted RBP8.68□□□□□ -1.02
BRCA1-219ENST00000491747 PRR30Q53SZ7 412 aaPredicted RBP8.68□□□□□ -1.02
BRCA1-219ENST00000491747 C6orf183Q5T699 404 aa8.68□□□□□ -1.02
BRCA1-219ENST00000491747 ZNF321PQ8N8H1 164 aa8.68□□□□□ -1.02
BRCA1-219ENST00000491747 OR8J2Q8NGG1 315 aa8.68□□□□□ -1.02
BRCA1-219ENST00000491747 DOK4Q8TEW6 326 aa8.68□□□□□ -1.02
BRCA1-219ENST00000491747 PIK3R3Q92569 461 aa8.68□□□□□ -1.02
BRCA1-219ENST00000491747 C7orf34Q96L11 122 aa8.68□□□□□ -1.02
BRCA1-219ENST00000491747 LMF1Q96S06 567 aa8.68□□□□□ -1.02
BRCA1-219ENST00000491747 TPT1P8Q9HAU6 139 aa8.68□□□□□ -1.02
BRCA1-219ENST00000491747 FKBP14Q9NWM8 211 aa8.68□□□□□ -1.02
BRCA1-219ENST00000491747 LYARQ9NX58 379 aaKnown RBP8.68□□□□□ -1.02
BRCA1-219ENST00000491747 MS4A12Q9NXJ0 267 aa8.68□□□□□ -1.02
BRCA1-219ENST00000491747 VPS29Q9UBQ0 182 aa8.68□□□□□ -1.02
BRCA1-219ENST00000491747 PHF11Q9UIL8 331 aa8.68□□□□□ -1.02
BRCA1-219ENST00000491747 ADAM29Q9UKF5 820 aa8.68□□□□□ -1.02
BRCA1-219ENST00000491747 LYVE1Q9Y5Y7 322 aa8.68□□□□□ -1.02
BRCA1-219ENST00000491747 SERTM1A2A2V5 107 aa8.67□□□□□ -1.02
BRCA1-219ENST00000491747 PRKNO60260 465 aaPredicted RBP8.67□□□□□ -1.02
BRCA1-219ENST00000491747 KRT75O95678 551 aa8.67□□□□□ -1.02
BRCA1-219ENST00000491747 ADORA3P0DMS8 318 aa8.67□□□□□ -1.02
BRCA1-219ENST00000491747 ANXA8P13928 327 aa8.67□□□□□ -1.02
BRCA1-219ENST00000491747 HSD3B1P14060 373 aa8.67□□□□□ -1.02
BRCA1-219ENST00000491747 HSD3B2P26439 372 aa8.67□□□□□ -1.02
BRCA1-219ENST00000491747 RCVRNP35243 200 aa8.67□□□□□ -1.02
BRCA1-219ENST00000491747 IDH2P48735 452 aaKnown RBP8.67□□□□□ -1.02
BRCA1-219ENST00000491747 RGS6P49758 472 aa8.67□□□□□ -1.02
BRCA1-219ENST00000491747 UGT2B15P54855 530 aa8.67□□□□□ -1.02
BRCA1-219ENST00000491747 COPZ1P61923 177 aa8.67□□□□□ -1.02
BRCA1-219ENST00000491747 KCNJ10P78508 379 aa8.67□□□□□ -1.02
BRCA1-219ENST00000491747 TLE1Q04724 770 aa8.67□□□□□ -1.02
BRCA1-219ENST00000491747 STX4Q12846 297 aa8.67□□□□□ -1.02
BRCA1-219ENST00000491747 IQCCQ4KMZ1 466 aa8.67□□□□□ -1.02
BRCA1-219ENST00000491747 ARMCX4Q5H9R4 360 aa8.67□□□□□ -1.02
BRCA1-219ENST00000491747 AGAP6Q5VW22 663 aa8.67□□□□□ -1.02
BRCA1-219ENST00000491747 Q6ZS92 163 aa8.67□□□□□ -1.02
BRCA1-219ENST00000491747 CLIP4Q8N3C7 705 aa8.67□□□□□ -1.02
BRCA1-219ENST00000491747 ZADH2Q8N4Q0 377 aa8.67□□□□□ -1.02
BRCA1-219ENST00000491747 VPS37AQ8NEZ2 397 aa8.67□□□□□ -1.02
BRCA1-219ENST00000491747 GGHQ92820 318 aa8.67□□□□□ -1.02
BRCA1-219ENST00000491747 TM4SF18Q96CE8 201 aa8.67□□□□□ -1.02
BRCA1-219ENST00000491747 C11orf24Q96F05 449 aaPredicted RBP8.67□□□□□ -1.02
BRCA1-219ENST00000491747 FEVQ99581 238 aa8.67□□□□□ -1.02
BRCA1-219ENST00000491747 DOHHQ9BU89 302 aa8.67□□□□□ -1.02
BRCA1-219ENST00000491747 CCDC32Q9BV29 185 aa8.67□□□□□ -1.02
BRCA1-219ENST00000491747 OR2B2Q9GZK3 357 aa8.67□□□□□ -1.02
BRCA1-219ENST00000491747 AMBNQ9NP70 447 aa8.67□□□□□ -1.02
BRCA1-219ENST00000491747 ADAP2Q9NPF8 381 aa8.67□□□□□ -1.02
BRCA1-219ENST00000491747 AHSPQ9NZD4 102 aa8.67□□□□□ -1.02
BRCA1-219ENST00000491747 EHD3Q9NZN3 535 aa8.67□□□□□ -1.02
BRCA1-219ENST00000491747 PPIEQ9UNP9 301 aaKnown RBP8.67□□□□□ -1.02
BRCA1-219ENST00000491747 POFUT2Q9Y2G5 429 aa8.67□□□□□ -1.02
BRCA1-219ENST00000491747 SPACA6W5XKT8 324 aa8.67□□□□□ -1.02
BRCA1-219ENST00000491747 NUP214P35658 2090 aaPredicted RBP8.67□□□□□ -1.02
BRCA1-219ENST00000491747 FAM172BPA6NC97 362 aa8.66□□□□□ -1.02
BRCA1-219ENST00000491747 TNFRSF11BO00300 401 aa8.66□□□□□ -1.02
BRCA1-219ENST00000491747 SCN2BO60939 215 aa8.66□□□□□ -1.02
BRCA1-219ENST00000491747 CPSF4O95639 269 aaKnown RBP8.66□□□□□ -1.02
BRCA1-219ENST00000491747 WDPCPO95876 746 aa8.66□□□□□ -1.02
BRCA1-219ENST00000491747 IFNA16P05015 189 aa8.66□□□□□ -1.02
BRCA1-219ENST00000491747 NR2F6P10588 404 aa8.66□□□□□ -1.02
BRCA1-219ENST00000491747 NR4A2P43354 598 aa8.66□□□□□ -1.02
BRCA1-219ENST00000491747 NKX2-5P52952 324 aaPredicted RBP8.66□□□□□ -1.02
BRCA1-219ENST00000491747 IFITM2Q01629 132 aa8.66□□□□□ -1.02
BRCA1-219ENST00000491747 ZNF33BQ06732 778 aa8.66□□□□□ -1.02
BRCA1-219ENST00000491747 ZNF750Q32MQ0 723 aa8.66□□□□□ -1.02
BRCA1-219ENST00000491747 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.66□□□□□ -1.02
BRCA1-219ENST00000491747 ZNF544Q6NX49 715 aa8.66□□□□□ -1.02
BRCA1-219ENST00000491747 GDPD3Q7L5L3 318 aa8.66□□□□□ -1.02
BRCA1-219ENST00000491747 BEST3Q8N1M1 668 aa8.66□□□□□ -1.02
BRCA1-219ENST00000491747 B3GNT7Q8NFL0 401 aa8.66□□□□□ -1.02
BRCA1-219ENST00000491747 PNPLA2Q96AD5 504 aa8.66□□□□□ -1.02
BRCA1-219ENST00000491747 FCRL1Q96LA6 429 aa8.66□□□□□ -1.02
BRCA1-219ENST00000491747 CEP19Q96LK0 163 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms