RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 ATP6AP1LQ52LC2 224 aa7.93□□□□□ -1.14
HDAC3-211ENST00000491581 TNFAIP8L2Q6P589 184 aaPredicted RBP7.93□□□□□ -1.14
HDAC3-211ENST00000491581 SEZ6L2Q6UXD5 910 aa7.93□□□□□ -1.14
HDAC3-211ENST00000491581 RNF165Q6ZSG1 346 aa7.93□□□□□ -1.14
HDAC3-211ENST00000491581 YTHDF3Q7Z739 585 aaKnown RBP7.93□□□□□ -1.14
HDAC3-211ENST00000491581 GPR119Q8TDV5 335 aa7.93□□□□□ -1.14
HDAC3-211ENST00000491581 ADAMTS15Q8TE58 950 aa7.93□□□□□ -1.14
HDAC3-211ENST00000491581 OR5P2Q8WZ92 322 aa7.93□□□□□ -1.14
HDAC3-211ENST00000491581 S100PBPQ96BU1 408 aa7.93□□□□□ -1.14
HDAC3-211ENST00000491581 COQ8BQ96D53 544 aa7.93□□□□□ -1.14
HDAC3-211ENST00000491581 ZNF764Q96H86 408 aaPredicted RBP7.93□□□□□ -1.14
HDAC3-211ENST00000491581 C18orf12Q96KH6 178 aa7.93□□□□□ -1.14
HDAC3-211ENST00000491581 KLHL15Q96M94 604 aa7.93□□□□□ -1.14
HDAC3-211ENST00000491581 SDF2Q99470 211 aa7.93□□□□□ -1.14
HDAC3-211ENST00000491581 CCL19Q99731 98 aa7.93□□□□□ -1.14
HDAC3-211ENST00000491581 THUMPD3Q9BV44 507 aaKnown RBP7.93□□□□□ -1.14
HDAC3-211ENST00000491581 DUSP26Q9BV47 211 aa7.93□□□□□ -1.14
HDAC3-211ENST00000491581 ACTRT3Q9BYD9 372 aa7.93□□□□□ -1.14
HDAC3-211ENST00000491581 ACTR6Q9GZN1 396 aa7.93□□□□□ -1.14
HDAC3-211ENST00000491581 OR51I1Q9H343 314 aa7.93□□□□□ -1.14
HDAC3-211ENST00000491581 ACBD3Q9H3P7 528 aa7.93□□□□□ -1.14
HDAC3-211ENST00000491581 PLSCR4Q9NRQ2 329 aa7.93□□□□□ -1.14
HDAC3-211ENST00000491581 MRTO4Q9UKD2 239 aaKnown RBP7.93□□□□□ -1.14
HDAC3-211ENST00000491581 ANKHD1Q8IWZ3 2542 aaKnown RBP7.93□□□□□ -1.14
HDAC3-211ENST00000491581 SETD2Q9BYW2 2564 aaPredicted RBP7.93□□□□□ -1.14
HDAC3-211ENST00000491581 CR1P17927 2039 aa7.93□□□□□ -1.14
HDAC3-211ENST00000491581 MAP1AP78559 2803 aaPredicted RBP7.93□□□□□ -1.14
HDAC3-211ENST00000491581 RNF103-CHMP3A0A140T963 221 aa7.92□□□□□ -1.14
HDAC3-211ENST00000491581 A0A1W2PR80 420 aa7.92□□□□□ -1.14
HDAC3-211ENST00000491581 AP3D1O14617 1153 aa7.92□□□□□ -1.14
HDAC3-211ENST00000491581 SMPD2O60906 423 aa7.92□□□□□ -1.14
HDAC3-211ENST00000491581 SCN2BO60939 215 aa7.92□□□□□ -1.14
HDAC3-211ENST00000491581 GCM2O75603 506 aaPredicted RBP7.92□□□□□ -1.14
HDAC3-211ENST00000491581 UGT2B17O75795 530 aa7.92□□□□□ -1.14
HDAC3-211ENST00000491581 SYNGR4O95473 234 aa7.92□□□□□ -1.14
HDAC3-211ENST00000491581 HSPA4LO95757 839 aa7.92□□□□□ -1.14
HDAC3-211ENST00000491581 CRHP06850 196 aa7.92□□□□□ -1.14
HDAC3-211ENST00000491581 NGFRP08138 427 aa7.92□□□□□ -1.14
HDAC3-211ENST00000491581 ALDOCP09972 364 aaKnown RBP7.92□□□□□ -1.14
HDAC3-211ENST00000491581 UBTFL6P0CB48 400 aaPredicted RBP7.92□□□□□ -1.14
HDAC3-211ENST00000491581 OR12D1P0DN82 309 aa7.92□□□□□ -1.14
HDAC3-211ENST00000491581 HPGDP15428 266 aa7.92□□□□□ -1.14
HDAC3-211ENST00000491581 ZNF17P17021 662 aa7.92□□□□□ -1.14
HDAC3-211ENST00000491581 CCNA2P20248 432 aa7.92□□□□□ -1.14
HDAC3-211ENST00000491581 PCSK6P29122 969 aa7.92□□□□□ -1.14
HDAC3-211ENST00000491581 ADSLP30566 484 aaPredicted RBP7.92□□□□□ -1.14
HDAC3-211ENST00000491581 CDKN2CP42773 168 aa7.92□□□□□ -1.14
HDAC3-211ENST00000491581 ASMTP46597 345 aa7.92□□□□□ -1.14
HDAC3-211ENST00000491581 CTBP2P56545 445 aa7.92□□□□□ -1.14
HDAC3-211ENST00000491581 CARD18P57730 90 aa7.92□□□□□ -1.14
HDAC3-211ENST00000491581 RAC1P63000 192 aa7.92□□□□□ -1.14
HDAC3-211ENST00000491581 MLC1Q15049 377 aa7.92□□□□□ -1.14
HDAC3-211ENST00000491581 QPRTQ15274 297 aa7.92□□□□□ -1.14
HDAC3-211ENST00000491581 KRT71Q3SY84 523 aa7.92□□□□□ -1.14
HDAC3-211ENST00000491581 GLYR1Q49A26 553 aaPredicted RBP7.92□□□□□ -1.14
HDAC3-211ENST00000491581 VPS26BQ4G0F5 336 aa7.92□□□□□ -1.14
HDAC3-211ENST00000491581 CLEC9AQ6UXN8 241 aa7.92□□□□□ -1.14
HDAC3-211ENST00000491581 ZNF704Q6ZNC4 412 aaPredicted RBP7.92□□□□□ -1.14
HDAC3-211ENST00000491581 C6orf120Q7Z4R8 191 aa7.92□□□□□ -1.14
HDAC3-211ENST00000491581 CAMKMTQ7Z624 323 aa7.92□□□□□ -1.14
HDAC3-211ENST00000491581 NUDCD3Q8IVD9 361 aa7.92□□□□□ -1.14
HDAC3-211ENST00000491581 EIF1ADQ8N9N8 165 aaKnown RBP7.92□□□□□ -1.14
HDAC3-211ENST00000491581 ZNF527Q8NB42 609 aa7.92□□□□□ -1.14
HDAC3-211ENST00000491581 OR6K3Q8NGY3 331 aa7.92□□□□□ -1.14
HDAC3-211ENST00000491581 PNPT1Q8TCS8 783 aaKnown RBP7.92□□□□□ -1.14
HDAC3-211ENST00000491581 RNF128Q8TEB7 428 aa7.92□□□□□ -1.14
HDAC3-211ENST00000491581 IGFBPL1Q8WX77 278 aa7.92□□□□□ -1.14
HDAC3-211ENST00000491581 HTRA1Q92743 480 aa7.92□□□□□ -1.14
HDAC3-211ENST00000491581 ZBTB8AQ96BR9 441 aa7.92□□□□□ -1.14
HDAC3-211ENST00000491581 MTERF3Q96E29 417 aa7.92□□□□□ -1.14
HDAC3-211ENST00000491581 GMPPAQ96IJ6 420 aaPredicted RBP7.92□□□□□ -1.14
HDAC3-211ENST00000491581 PPP3R2Q96LZ3 170 aa7.92□□□□□ -1.14
HDAC3-211ENST00000491581 INPP5KQ9BT40 448 aa7.92□□□□□ -1.14
HDAC3-211ENST00000491581 TRMOQ9BU70 441 aa7.92□□□□□ -1.14
HDAC3-211ENST00000491581 NUF2Q9BZD4 464 aa7.92□□□□□ -1.14
HDAC3-211ENST00000491581 OR11A1Q9GZK7 315 aa7.92□□□□□ -1.14
HDAC3-211ENST00000491581 CENPHQ9H3R5 247 aa7.92□□□□□ -1.14
HDAC3-211ENST00000491581 SLC6A13Q9NSD5 602 aa7.92□□□□□ -1.14
HDAC3-211ENST00000491581 ELOVL5Q9NYP7 299 aa7.92□□□□□ -1.14
HDAC3-211ENST00000491581 WBP11Q9Y2W2 641 aaKnown RBP7.92□□□□□ -1.14
HDAC3-211ENST00000491581 TMED5Q9Y3A6 229 aa7.92□□□□□ -1.14
HDAC3-211ENST00000491581 FLNAP21333 2647 aaKnown RBP7.92□□□□□ -1.14
HDAC3-211ENST00000491581 UQCRHLA0A096LP55 91 aa7.91□□□□□ -1.14
HDAC3-211ENST00000491581 GOLGA8QA0A0J9YX86 632 aa7.91□□□□□ -1.14
HDAC3-211ENST00000491581 A0A1W2PQD3 144 aa7.91□□□□□ -1.14
HDAC3-211ENST00000491581 C7orf72A4D263 438 aa7.91□□□□□ -1.14
HDAC3-211ENST00000491581 GOLGA8OA6NCC3 632 aa7.91□□□□□ -1.14
HDAC3-211ENST00000491581 KIAA1324LA8MWY0 1029 aaPredicted RBP7.91□□□□□ -1.14
HDAC3-211ENST00000491581 TMEM114B3SHH9 223 aa7.91□□□□□ -1.14
HDAC3-211ENST00000491581 GOLGA8NF8WBI6 632 aa7.91□□□□□ -1.14
HDAC3-211ENST00000491581 H3BQF6 201 aa7.91□□□□□ -1.14
HDAC3-211ENST00000491581 GTPBP1O00178 669 aaKnown RBP7.91□□□□□ -1.14
HDAC3-211ENST00000491581 ANKRD28O15084 1053 aa7.91□□□□□ -1.14
HDAC3-211ENST00000491581 SMAD9O15198 467 aaKnown RBP7.91□□□□□ -1.14
HDAC3-211ENST00000491581 LYZL6O75951 148 aa7.91□□□□□ -1.14
HDAC3-211ENST00000491581 ADAP00813 363 aa7.91□□□□□ -1.14
HDAC3-211ENST00000491581 GSNP06396 782 aa7.91□□□□□ -1.14
HDAC3-211ENST00000491581 TUBBP07437 444 aa7.91□□□□□ -1.14
HDAC3-211ENST00000491581 IFI6P09912 130 aa7.91□□□□□ -1.14
HDAC3-211ENST00000491581 ATP6V1C1P21283 382 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms