RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 ZNF195O14628 629 aa14.87□□□□□ -0.03
PDLIM2-217ENST00000491330 ARHGEF9O43307 516 aa14.87□□□□□ -0.03
PDLIM2-217ENST00000491330 CPSF4O95639 269 aaKnown RBP14.87□□□□□ -0.03
PDLIM2-217ENST00000491330 FPR1P21462 350 aa14.87□□□□□ -0.03
PDLIM2-217ENST00000491330 FKBP2P26885 142 aaKnown RBP14.87□□□□□ -0.03
PDLIM2-217ENST00000491330 UGT2B10P36537 528 aa14.87□□□□□ -0.03
PDLIM2-217ENST00000491330 TPD52P55327 224 aaPredicted RBP14.87□□□□□ -0.03
PDLIM2-217ENST00000491330 IRX1P78414 480 aaPredicted RBP14.87□□□□□ -0.03
PDLIM2-217ENST00000491330 GNA13Q14344 377 aa14.87□□□□□ -0.03
PDLIM2-217ENST00000491330 GPR68Q15743 365 aa14.87□□□□□ -0.03
PDLIM2-217ENST00000491330 EXOC3L2Q2M3D2 409 aa14.87□□□□□ -0.03
PDLIM2-217ENST00000491330 EXOSC6Q5RKV6 272 aaKnown RBP14.87□□□□□ -0.03
PDLIM2-217ENST00000491330 EIF3MQ7L2H7 374 aaKnown RBP14.87□□□□□ -0.03
PDLIM2-217ENST00000491330 SLC43A2Q8N370 569 aa14.87□□□□□ -0.03
PDLIM2-217ENST00000491330 ZNF610Q8N9Z0 462 aa14.87□□□□□ -0.03
PDLIM2-217ENST00000491330 GLB1L3Q8NCI6 653 aaPredicted RBP14.87□□□□□ -0.03
PDLIM2-217ENST00000491330 OR5W2Q8NH69 310 aa14.87□□□□□ -0.03
PDLIM2-217ENST00000491330 PIWIL2Q8TC59 973 aaKnown RBP14.87□□□□□ -0.03
PDLIM2-217ENST00000491330 NRGNQ92686 78 aa14.87□□□□□ -0.03
PDLIM2-217ENST00000491330 MBD6Q96DN6 1003 aa14.87□□□□□ -0.03
PDLIM2-217ENST00000491330 MRGPRX4Q96LA9 322 aa14.87□□□□□ -0.03
PDLIM2-217ENST00000491330 USB1Q9BQ65 265 aaKnown RBP14.87□□□□□ -0.03
PDLIM2-217ENST00000491330 NUF2Q9BZD4 464 aa14.87□□□□□ -0.03
PDLIM2-217ENST00000491330 CACYBPQ9HB71 228 aaKnown RBP14.87□□□□□ -0.03
PDLIM2-217ENST00000491330 PLSCR4Q9NRQ2 329 aa14.87□□□□□ -0.03
PDLIM2-217ENST00000491330 KLHL28Q9NXS3 571 aa14.87□□□□□ -0.03
PDLIM2-217ENST00000491330 LRBAP50851 2863 aa14.86□□□□□ -0.03
PDLIM2-217ENST00000491330 SHISA8B8ZZ34 492 aa14.86□□□□□ -0.03
PDLIM2-217ENST00000491330 TNFSF11O14788 317 aa14.86□□□□□ -0.03
PDLIM2-217ENST00000491330 CSTAP01040 98 aa14.86□□□□□ -0.03
PDLIM2-217ENST00000491330 HRGP04196 525 aa14.86□□□□□ -0.03
PDLIM2-217ENST00000491330 PGCP20142 388 aa14.86□□□□□ -0.03
PDLIM2-217ENST00000491330 IL11P20809 199 aa14.86□□□□□ -0.03
PDLIM2-217ENST00000491330 SFTPDP35247 375 aa14.86□□□□□ -0.03
PDLIM2-217ENST00000491330 KHKP50053 298 aa14.86□□□□□ -0.03
PDLIM2-217ENST00000491330 ZNF117Q03924 483 aa14.86□□□□□ -0.03
PDLIM2-217ENST00000491330 SELENBP1Q13228 472 aa14.86□□□□□ -0.03
PDLIM2-217ENST00000491330 POU4F3Q15319 338 aa14.86□□□□□ -0.03
PDLIM2-217ENST00000491330 ARHGAP11BQ3KRB8 267 aa14.86□□□□□ -0.03
PDLIM2-217ENST00000491330 GGNQ86UU5 652 aa14.86□□□□□ -0.03
PDLIM2-217ENST00000491330 FBXO27Q8NI29 283 aa14.86□□□□□ -0.03
PDLIM2-217ENST00000491330 XAGE5Q8WWM1 108 aa14.86□□□□□ -0.03
PDLIM2-217ENST00000491330 PIGTQ969N2 578 aa14.86□□□□□ -0.03
PDLIM2-217ENST00000491330 MAELQ96JY0 434 aaKnown RBP14.86□□□□□ -0.03
PDLIM2-217ENST00000491330 C7orf26Q96N11 449 aa14.86□□□□□ -0.03
PDLIM2-217ENST00000491330 SDF2Q99470 211 aa14.86□□□□□ -0.03
PDLIM2-217ENST00000491330 HDHD5Q9BXW7 423 aa14.86□□□□□ -0.03
PDLIM2-217ENST00000491330 TMEM185BQ9H7F4 350 aa14.86□□□□□ -0.03
PDLIM2-217ENST00000491330 GP6Q9HCN6 339 aa14.86□□□□□ -0.03
PDLIM2-217ENST00000491330 NGBQ9NPG2 151 aa14.86□□□□□ -0.03
PDLIM2-217ENST00000491330 FBXO34Q9NWN3 711 aa14.86□□□□□ -0.03
PDLIM2-217ENST00000491330 TESMINQ9Y4I5 508 aa14.86□□□□□ -0.03
PDLIM2-217ENST00000491330 SERINC4A6NH21 518 aa14.85□□□□□ -0.03
PDLIM2-217ENST00000491330 E9PBE3 544 aa14.85□□□□□ -0.03
PDLIM2-217ENST00000491330 SS18L1O75177 396 aaPredicted RBP14.85□□□□□ -0.03
PDLIM2-217ENST00000491330 AQP8O94778 261 aa14.85□□□□□ -0.03
PDLIM2-217ENST00000491330 PRKD3O94806 890 aa14.85□□□□□ -0.03
PDLIM2-217ENST00000491330 TGDSO95455 350 aa14.85□□□□□ -0.03
PDLIM2-217ENST00000491330 LINGO3P0C6S8 592 aa14.85□□□□□ -0.03
PDLIM2-217ENST00000491330 IDO1P14902 403 aa14.85□□□□□ -0.03
PDLIM2-217ENST00000491330 UQCRBP14927 111 aa14.85□□□□□ -0.03
PDLIM2-217ENST00000491330 H2AFXP16104 143 aaPredicted RBP14.85□□□□□ -0.03
PDLIM2-217ENST00000491330 MAGEA8P43361 318 aa14.85□□□□□ -0.03
PDLIM2-217ENST00000491330 CD226Q15762 336 aa14.85□□□□□ -0.03
PDLIM2-217ENST00000491330 GSTA3Q16772 222 aa14.85□□□□□ -0.03
PDLIM2-217ENST00000491330 DEFB113Q30KQ7 82 aa14.85□□□□□ -0.03
PDLIM2-217ENST00000491330 TMEM176BQ3YBM2 270 aaPredicted RBP14.85□□□□□ -0.03
PDLIM2-217ENST00000491330 ZAR1Q86SH2 424 aa14.85□□□□□ -0.03
PDLIM2-217ENST00000491330 TGIF2LYQ8IUE0 185 aa14.85□□□□□ -0.03
PDLIM2-217ENST00000491330 ATP6V1C2Q8NEY4 427 aa14.85□□□□□ -0.03
PDLIM2-217ENST00000491330 ZNF563Q8TA94 476 aa14.85□□□□□ -0.03
PDLIM2-217ENST00000491330 MGARPQ8TDB4 240 aa14.85□□□□□ -0.03
PDLIM2-217ENST00000491330 ZHX1-C8orf76Q96EF9 292 aa14.85□□□□□ -0.03
PDLIM2-217ENST00000491330 PIK3IP1Q96FE7 263 aa14.85□□□□□ -0.03
PDLIM2-217ENST00000491330 WFIKKN1Q96NZ8 548 aa14.85□□□□□ -0.03
PDLIM2-217ENST00000491330 CXXC4Q9H2H0 198 aa14.85□□□□□ -0.03
PDLIM2-217ENST00000491330 ZNF395Q9H8N7 513 aaPredicted RBP14.85□□□□□ -0.03
PDLIM2-217ENST00000491330 BEX4Q9NWD9 120 aaPredicted RBP14.85□□□□□ -0.03
PDLIM2-217ENST00000491330 SLC35A3Q9Y2D2 325 aa14.85□□□□□ -0.03
PDLIM2-217ENST00000491330 WDR45Q9Y484 360 aa14.85□□□□□ -0.03
PDLIM2-217ENST00000491330 CCDC168Q8NDH2 2452 aa14.85□□□□□ -0.03
PDLIM2-217ENST00000491330 TMEM247A6NEH6 219 aa14.84□□□□□ -0.03
PDLIM2-217ENST00000491330 B4DXG7 233 aa14.84□□□□□ -0.03
PDLIM2-217ENST00000491330 ANKRD28O15084 1053 aa14.84□□□□□ -0.03
PDLIM2-217ENST00000491330 OPN1LWP04000 364 aa14.84□□□□□ -0.03
PDLIM2-217ENST00000491330 GUSBP08236 651 aa14.84□□□□□ -0.03
PDLIM2-217ENST00000491330 NR1H2P55055 460 aa14.84□□□□□ -0.03
PDLIM2-217ENST00000491330 FOXF1Q12946 379 aa14.84□□□□□ -0.03
PDLIM2-217ENST00000491330 GPAT3Q53EU6 434 aa14.84□□□□□ -0.03
PDLIM2-217ENST00000491330 PDZK1Q5T2W1 519 aa14.84□□□□□ -0.03
PDLIM2-217ENST00000491330 NXNQ6DKJ4 435 aa14.84□□□□□ -0.03
PDLIM2-217ENST00000491330 C3orf33Q6P1S2 294 aa14.84□□□□□ -0.03
PDLIM2-217ENST00000491330 ZNF474Q6S9Z5 364 aaPredicted RBP14.84□□□□□ -0.03
PDLIM2-217ENST00000491330 P3H2Q8IVL5 708 aa14.84□□□□□ -0.03
PDLIM2-217ENST00000491330 CLECL1Q8IZS7 167 aa14.84□□□□□ -0.03
PDLIM2-217ENST00000491330 STEAP2Q8NFT2 490 aa14.84□□□□□ -0.03
PDLIM2-217ENST00000491330 OR5D16Q8NGK9 328 aa14.84□□□□□ -0.03
PDLIM2-217ENST00000491330 MIPOL1Q8TD10 442 aa14.84□□□□□ -0.03
PDLIM2-217ENST00000491330 GPR119Q8TDV5 335 aa14.84□□□□□ -0.03
PDLIM2-217ENST00000491330 ST8SIA1Q92185 356 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms