RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 RIPK1Q13546 671 aa12.08□□□□□ -0.48
SNX12-205ENST00000490561 COL28A1Q2UY09 1125 aa12.08□□□□□ -0.48
SNX12-205ENST00000490561 BICRALQ6AI39 1079 aa12.08□□□□□ -0.48
SNX12-205ENST00000490561 TIGD3Q6B0B8 471 aa12.08□□□□□ -0.48
SNX12-205ENST00000490561 WBP2NLQ6ICG8 309 aa12.08□□□□□ -0.48
SNX12-205ENST00000490561 ZNF613Q6PF04 617 aa12.08□□□□□ -0.48
SNX12-205ENST00000490561 DEF8Q6ZN54 512 aa12.08□□□□□ -0.48
SNX12-205ENST00000490561 PLEKHM3Q6ZWE6 761 aa12.08□□□□□ -0.48
SNX12-205ENST00000490561 LSMEM1Q8N8F7 131 aa12.08□□□□□ -0.48
SNX12-205ENST00000490561 FADS6Q8N9I5 356 aa12.08□□□□□ -0.48
SNX12-205ENST00000490561 OR2M7Q8NG81 312 aa12.08□□□□□ -0.48
SNX12-205ENST00000490561 PYDC1Q8WXC3 89 aa12.08□□□□□ -0.48
SNX12-205ENST00000490561 ST8SIA1Q92185 356 aa12.08□□□□□ -0.48
SNX12-205ENST00000490561 EXTL1Q92935 676 aa12.08□□□□□ -0.48
SNX12-205ENST00000490561 SLCO4A1Q96BD0 722 aa12.08□□□□□ -0.48
SNX12-205ENST00000490561 SH3YL1Q96HL8 342 aaPredicted RBP12.08□□□□□ -0.48
SNX12-205ENST00000490561 MCHR1Q99705 422 aa12.08□□□□□ -0.48
SNX12-205ENST00000490561 PIP5K1AQ99755 562 aa12.08□□□□□ -0.48
SNX12-205ENST00000490561 RSPO3Q9BXY4 272 aaPredicted RBP12.08□□□□□ -0.48
SNX12-205ENST00000490561 AMBRA1Q9C0C7 1298 aa12.08□□□□□ -0.48
SNX12-205ENST00000490561 DCLRE1BQ9H816 532 aa12.08□□□□□ -0.48
SNX12-205ENST00000490561 ZFP64Q9NPA5 681 aa12.08□□□□□ -0.48
SNX12-205ENST00000490561 NDUFAF4Q9P032 175 aa12.08□□□□□ -0.48
SNX12-205ENST00000490561 RPS6KB2Q9UBS0 482 aa12.08□□□□□ -0.48
SNX12-205ENST00000490561 ZMIZ1Q9ULJ6 1067 aa12.08□□□□□ -0.48
SNX12-205ENST00000490561 NCOR2Q9Y618 2525 aa12.07□□□□□ -0.48
SNX12-205ENST00000490561 FRS3O43559 492 aa12.07□□□□□ -0.48
SNX12-205ENST00000490561 CBR3O75828 277 aa12.07□□□□□ -0.48
SNX12-205ENST00000490561 KRT36O76013 467 aa12.07□□□□□ -0.48
SNX12-205ENST00000490561 NUDT14O95848 222 aa12.07□□□□□ -0.48
SNX12-205ENST00000490561 LDLRP01130 860 aa12.07□□□□□ -0.48
SNX12-205ENST00000490561 GKN3PP0CG01 181 aa12.07□□□□□ -0.48
SNX12-205ENST00000490561 SFTPCP11686 197 aa12.07□□□□□ -0.48
SNX12-205ENST00000490561 TNFRSF1BP20333 461 aa12.07□□□□□ -0.48
SNX12-205ENST00000490561 ACAA2P42765 397 aaKnown RBP12.07□□□□□ -0.48
SNX12-205ENST00000490561 ERFP50548 548 aa12.07□□□□□ -0.48
SNX12-205ENST00000490561 RNF144AP50876 292 aaPredicted RBP12.07□□□□□ -0.48
SNX12-205ENST00000490561 ZNF41P51814 821 aaPredicted RBP12.07□□□□□ -0.48
SNX12-205ENST00000490561 TAS2R41P59536 307 aa12.07□□□□□ -0.48
SNX12-205ENST00000490561 VLDLRP98155 873 aa12.07□□□□□ -0.48
SNX12-205ENST00000490561 PLAURQ03405 335 aa12.07□□□□□ -0.48
SNX12-205ENST00000490561 ZNF169Q14929 603 aaPredicted RBP12.07□□□□□ -0.48
SNX12-205ENST00000490561 NPTX1Q15818 432 aa12.07□□□□□ -0.48
SNX12-205ENST00000490561 INAQ16352 499 aa12.07□□□□□ -0.48
SNX12-205ENST00000490561 SWT1Q5T5J6 900 aaKnown RBP12.07□□□□□ -0.48
SNX12-205ENST00000490561 COMTD1Q86VU5 262 aa12.07□□□□□ -0.48
SNX12-205ENST00000490561 LACC1Q8IV20 430 aa12.07□□□□□ -0.48
SNX12-205ENST00000490561 SULF2Q8IWU5 870 aa12.07□□□□□ -0.48
SNX12-205ENST00000490561 OR2M3Q8NG83 312 aa12.07□□□□□ -0.48
SNX12-205ENST00000490561 ZNF563Q8TA94 476 aa12.07□□□□□ -0.48
SNX12-205ENST00000490561 C9orf43Q8TAL5 461 aaPredicted RBP12.07□□□□□ -0.48
SNX12-205ENST00000490561 GPR119Q8TDV5 335 aa12.07□□□□□ -0.48
SNX12-205ENST00000490561 PHF10Q8WUB8 498 aaKnown RBP12.07□□□□□ -0.48
SNX12-205ENST00000490561 DNAJA4Q8WW22 397 aaPredicted RBP12.07□□□□□ -0.48
SNX12-205ENST00000490561 BDH2Q9BUT1 245 aa12.07□□□□□ -0.48
SNX12-205ENST00000490561 FNDC11Q9BVV2 318 aa12.07□□□□□ -0.48
SNX12-205ENST00000490561 RTN4RQ9BZR6 473 aa12.07□□□□□ -0.48
SNX12-205ENST00000490561 DSN1Q9H410 356 aa12.07□□□□□ -0.48
SNX12-205ENST00000490561 ANKRD19PQ9H560 264 aa12.07□□□□□ -0.48
SNX12-205ENST00000490561 C12orf10Q9HB07 376 aa12.07□□□□□ -0.48
SNX12-205ENST00000490561 PROK2Q9HC23 129 aa12.07□□□□□ -0.48
SNX12-205ENST00000490561 TAS2R10Q9NYW0 307 aa12.07□□□□□ -0.48
SNX12-205ENST00000490561 DNAJB9Q9UBS3 223 aa12.07□□□□□ -0.48
SNX12-205ENST00000490561 ACAD8Q9UKU7 415 aa12.07□□□□□ -0.48
SNX12-205ENST00000490561 MRPS18CQ9Y3D5 142 aaKnown RBP12.07□□□□□ -0.48
SNX12-205ENST00000490561 TRAPPC13A5PLN9 417 aa12.06□□□□□ -0.48
SNX12-205ENST00000490561 hCG_2039718K7EN88 272 aa12.06□□□□□ -0.48
SNX12-205ENST00000490561 ACOT7O00154 380 aa12.06□□□□□ -0.48
SNX12-205ENST00000490561 GNGT2O14610 69 aa12.06□□□□□ -0.48
SNX12-205ENST00000490561 GNB5O14775 395 aa12.06□□□□□ -0.48
SNX12-205ENST00000490561 OIP5O43482 229 aa12.06□□□□□ -0.48
SNX12-205ENST00000490561 MGRN1O60291 552 aa12.06□□□□□ -0.48
SNX12-205ENST00000490561 CDC40O60508 579 aaKnown RBP eCLIP12.06□□□□□ -0.48
SNX12-205ENST00000490561 BCAS1O75363 584 aaPredicted RBP12.06□□□□□ -0.48
SNX12-205ENST00000490561 CST1P01037 141 aa12.06□□□□□ -0.48
SNX12-205ENST00000490561 GP1BBP13224 206 aa12.06□□□□□ -0.48
SNX12-205ENST00000490561 EIF1P41567 113 aaKnown RBP12.06□□□□□ -0.48
SNX12-205ENST00000490561 SLC1A3P43003 542 aa12.06□□□□□ -0.48
SNX12-205ENST00000490561 DNASE1L1P49184 302 aa12.06□□□□□ -0.48
SNX12-205ENST00000490561 MEOX1P50221 254 aa12.06□□□□□ -0.48
SNX12-205ENST00000490561 ST13P50502 369 aaKnown RBP12.06□□□□□ -0.48
SNX12-205ENST00000490561 DLX5P56178 289 aa12.06□□□□□ -0.48
SNX12-205ENST00000490561 DSCR4P56555 118 aaPredicted RBP12.06□□□□□ -0.48
SNX12-205ENST00000490561 ST3GAL3Q11203 375 aa12.06□□□□□ -0.48
SNX12-205ENST00000490561 OR1Q1Q15612 314 aa12.06□□□□□ -0.48
SNX12-205ENST00000490561 ATP6AP1Q15904 470 aa12.06□□□□□ -0.48
SNX12-205ENST00000490561 HYAL4Q2M3T9 481 aa12.06□□□□□ -0.48
SNX12-205ENST00000490561 GLYR1Q49A26 553 aaPredicted RBP12.06□□□□□ -0.48
SNX12-205ENST00000490561 ENTPD8Q5MY95 495 aa12.06□□□□□ -0.48
SNX12-205ENST00000490561 OR2T5Q6IEZ7 315 aa12.06□□□□□ -0.48
SNX12-205ENST00000490561 ULK3Q6PHR2 472 aa12.06□□□□□ -0.48
SNX12-205ENST00000490561 CBLN3Q6UW01 205 aa12.06□□□□□ -0.48
SNX12-205ENST00000490561 Q6ZS92 163 aa12.06□□□□□ -0.48
SNX12-205ENST00000490561 GALNTL5Q7Z4T8 443 aa12.06□□□□□ -0.48
SNX12-205ENST00000490561 RBM45Q8IUH3 476 aaKnown RBP12.06□□□□□ -0.48
SNX12-205ENST00000490561 OFCC1Q8IZS5 231 aa12.06□□□□□ -0.48
SNX12-205ENST00000490561 WDSUB1Q8N9V3 476 aa12.06□□□□□ -0.48
SNX12-205ENST00000490561 PIK3C3Q8NEB9 887 aa12.06□□□□□ -0.48
SNX12-205ENST00000490561 OR4D11Q8NGI4 311 aa12.06□□□□□ -0.48
SNX12-205ENST00000490561 OR2T29Q8NH02 315 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms