RNA–Protein interactions for RNA: ENST00000489948.5

TRAIP-210, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-210ENST00000489948 TNFRSF1BP20333 461 aa12.19□□□□□ -0.46
TRAIP-210ENST00000489948 ELAVL4P26378 380 aaKnown RBP12.19□□□□□ -0.46
TRAIP-210ENST00000489948 ACAA2P42765 397 aaKnown RBP12.19□□□□□ -0.46
TRAIP-210ENST00000489948 OR1E2P47887 323 aa12.19□□□□□ -0.46
TRAIP-210ENST00000489948 ERFP50548 548 aa12.19□□□□□ -0.46
TRAIP-210ENST00000489948 P2RX1P51575 399 aa12.19□□□□□ -0.46
TRAIP-210ENST00000489948 CXADRP78310 365 aa12.19□□□□□ -0.46
TRAIP-210ENST00000489948 ARG2P78540 354 aa12.19□□□□□ -0.46
TRAIP-210ENST00000489948 CBFBQ13951 182 aa12.19□□□□□ -0.46
TRAIP-210ENST00000489948 GK3PQ14409 553 aa12.19□□□□□ -0.46
TRAIP-210ENST00000489948 GANABQ14697 944 aaKnown RBP12.19□□□□□ -0.46
TRAIP-210ENST00000489948 PRAMEF20Q5VT98 475 aa12.19□□□□□ -0.46
TRAIP-210ENST00000489948 TSEN54Q7Z6J9 526 aaKnown RBP12.19□□□□□ -0.46
TRAIP-210ENST00000489948 OFCC1Q8IZS5 231 aa12.19□□□□□ -0.46
TRAIP-210ENST00000489948 GATSQ8NAP1 163 aa12.19□□□□□ -0.46
TRAIP-210ENST00000489948 OR5W2Q8NH69 310 aa12.19□□□□□ -0.46
TRAIP-210ENST00000489948 B4GALNT2Q8NHY0 566 aa12.19□□□□□ -0.46
TRAIP-210ENST00000489948 DTNBP1Q96EV8 351 aa12.19□□□□□ -0.46
TRAIP-210ENST00000489948 DHRS1Q96LJ7 313 aa12.19□□□□□ -0.46
TRAIP-210ENST00000489948 ZNF597Q96LX8 424 aa12.19□□□□□ -0.46
TRAIP-210ENST00000489948 WFDC6Q9BQY6 131 aa12.19□□□□□ -0.46
TRAIP-210ENST00000489948 ZNF559Q9BR84 538 aa12.19□□□□□ -0.46
TRAIP-210ENST00000489948 DCLRE1BQ9H816 532 aa12.19□□□□□ -0.46
TRAIP-210ENST00000489948 AGPAT4Q9NRZ5 378 aa12.19□□□□□ -0.46
TRAIP-210ENST00000489948 ANKRD10Q9NXR5 420 aa12.19□□□□□ -0.46
TRAIP-210ENST00000489948 PPP4R1LQ9P1A2 415 aa12.19□□□□□ -0.46
TRAIP-210ENST00000489948 CARD8Q9Y2G2 431 aa12.19□□□□□ -0.46
TRAIP-210ENST00000489948 TRAV17A0A0B4J275 112 aa12.18□□□□□ -0.46
TRAIP-210ENST00000489948 ANKUB1A6NFN9 424 aa12.18□□□□□ -0.46
TRAIP-210ENST00000489948 B4DXG7 233 aa12.18□□□□□ -0.46
TRAIP-210ENST00000489948 GTPBP1O00178 669 aaKnown RBP12.18□□□□□ -0.46
TRAIP-210ENST00000489948 AP3D1O14617 1153 aa12.18□□□□□ -0.46
TRAIP-210ENST00000489948 OIP5O43482 229 aa12.18□□□□□ -0.46
TRAIP-210ENST00000489948 FRS3O43559 492 aa12.18□□□□□ -0.46
TRAIP-210ENST00000489948 TPST2O60704 377 aa12.18□□□□□ -0.46
TRAIP-210ENST00000489948 ADAM11O75078 769 aa12.18□□□□□ -0.46
TRAIP-210ENST00000489948 OR5F1O95221 314 aa12.18□□□□□ -0.46
TRAIP-210ENST00000489948 THRBP10828 461 aa12.18□□□□□ -0.46
TRAIP-210ENST00000489948 CD46P15529 392 aa12.18□□□□□ -0.46
TRAIP-210ENST00000489948 CNR1P21554 472 aa12.18□□□□□ -0.46
TRAIP-210ENST00000489948 ATP6AP1Q15904 470 aa12.18□□□□□ -0.46
TRAIP-210ENST00000489948 NDUFAF6Q330K2 333 aa12.18□□□□□ -0.46
TRAIP-210ENST00000489948 SWT1Q5T5J6 900 aaKnown RBP12.18□□□□□ -0.46
TRAIP-210ENST00000489948 SPINK14Q6IE38 97 aa12.18□□□□□ -0.46
TRAIP-210ENST00000489948 ZNF613Q6PF04 617 aa12.18□□□□□ -0.46
TRAIP-210ENST00000489948 CBLN3Q6UW01 205 aa12.18□□□□□ -0.46
TRAIP-210ENST00000489948 PACS2Q86VP3 889 aa12.18□□□□□ -0.46
TRAIP-210ENST00000489948 CYP4Z1Q86W10 505 aa12.18□□□□□ -0.46
TRAIP-210ENST00000489948 PLCZ1Q86YW0 608 aa12.18□□□□□ -0.46
TRAIP-210ENST00000489948 RBM45Q8IUH3 476 aaKnown RBP12.18□□□□□ -0.46
TRAIP-210ENST00000489948 TMCO5AQ8N6Q1 288 aa12.18□□□□□ -0.46
TRAIP-210ENST00000489948 TMEM178AQ8NBL3 297 aa12.18□□□□□ -0.46
TRAIP-210ENST00000489948 OR2M3Q8NG83 312 aa12.18□□□□□ -0.46
TRAIP-210ENST00000489948 VANGL1Q8TAA9 524 aaPredicted RBP12.18□□□□□ -0.46
TRAIP-210ENST00000489948 C5orf34Q96MH7 638 aa12.18□□□□□ -0.46
TRAIP-210ENST00000489948 FAM173AQ9BQD7 235 aa12.18□□□□□ -0.46
TRAIP-210ENST00000489948 TRIM2Q9C040 744 aa12.18□□□□□ -0.46
TRAIP-210ENST00000489948 ADNPQ9H2P0 1102 aa12.18□□□□□ -0.46
TRAIP-210ENST00000489948 ANKRD19PQ9H560 264 aa12.18□□□□□ -0.46
TRAIP-210ENST00000489948 PRORYQ9H606 182 aa12.18□□□□□ -0.46
TRAIP-210ENST00000489948 PLA2G3Q9NZ20 509 aa12.18□□□□□ -0.46
TRAIP-210ENST00000489948 BOKQ9UMX3 212 aaPredicted RBP12.18□□□□□ -0.46
TRAIP-210ENST00000489948 A4GNTQ9UNA3 340 aa12.18□□□□□ -0.46
TRAIP-210ENST00000489948 MAP1BP46821 2468 aaKnown RBP12.17□□□□□ -0.46
TRAIP-210ENST00000489948 USP24Q9UPU5 2620 aa12.17□□□□□ -0.46
TRAIP-210ENST00000489948 LRRC3CA6NJW4 275 aa12.17□□□□□ -0.46
TRAIP-210ENST00000489948 hCG_2039718K7EN88 272 aa12.17□□□□□ -0.46
TRAIP-210ENST00000489948 ADAMDEC1O15204 470 aa12.17□□□□□ -0.46
TRAIP-210ENST00000489948 DEAF1O75398 565 aaPredicted RBP12.17□□□□□ -0.46
TRAIP-210ENST00000489948 SP1P08047 785 aa12.17□□□□□ -0.46
TRAIP-210ENST00000489948 GKN3PP0CG01 181 aa12.17□□□□□ -0.46
TRAIP-210ENST00000489948 PRG2P13727 222 aa12.17□□□□□ -0.46
TRAIP-210ENST00000489948 PGCP20142 388 aa12.17□□□□□ -0.46
TRAIP-210ENST00000489948 FASP25445 335 aa12.17□□□□□ -0.46
TRAIP-210ENST00000489948 HTR2AP28223 471 aa12.17□□□□□ -0.46
TRAIP-210ENST00000489948 RNF144AP50876 292 aaPredicted RBP12.17□□□□□ -0.46
TRAIP-210ENST00000489948 FOXO1Q12778 655 aa12.17□□□□□ -0.46
TRAIP-210ENST00000489948 RCN1Q15293 331 aa12.17□□□□□ -0.46
TRAIP-210ENST00000489948 COL28A1Q2UY09 1125 aa12.17□□□□□ -0.46
TRAIP-210ENST00000489948 ZNF766Q5HY98 468 aa12.17□□□□□ -0.46
TRAIP-210ENST00000489948 TIGD3Q6B0B8 471 aa12.17□□□□□ -0.46
TRAIP-210ENST00000489948 SLC25A25Q6KCM7 469 aa12.17□□□□□ -0.46
TRAIP-210ENST00000489948 DEF8Q6ZN54 512 aa12.17□□□□□ -0.46
TRAIP-210ENST00000489948 PQLC1Q8N2U9 271 aa12.17□□□□□ -0.46
TRAIP-210ENST00000489948 WDSUB1Q8N9V3 476 aa12.17□□□□□ -0.46
TRAIP-210ENST00000489948 OR2M7Q8NG81 312 aa12.17□□□□□ -0.46
TRAIP-210ENST00000489948 DUSP19Q8WTR2 217 aa12.17□□□□□ -0.46
TRAIP-210ENST00000489948 ST8SIA1Q92185 356 aa12.17□□□□□ -0.46
TRAIP-210ENST00000489948 MCHR1Q99705 422 aa12.17□□□□□ -0.46
TRAIP-210ENST00000489948 PIP5K1AQ99755 562 aa12.17□□□□□ -0.46
TRAIP-210ENST00000489948 RNPEPL1Q9HAU8 725 aa12.17□□□□□ -0.46
TRAIP-210ENST00000489948 C12orf10Q9HB07 376 aa12.17□□□□□ -0.46
TRAIP-210ENST00000489948 DEPPQ9NTK1 212 aa12.17□□□□□ -0.46
TRAIP-210ENST00000489948 C6orf203Q9P0P8 240 aaPredicted RBP12.17□□□□□ -0.46
TRAIP-210ENST00000489948 STX18Q9P2W9 335 aaKnown RBP12.17□□□□□ -0.46
TRAIP-210ENST00000489948 DNAJB9Q9UBS3 223 aa12.17□□□□□ -0.46
TRAIP-210ENST00000489948 RIMS3Q9UJD0 308 aa12.17□□□□□ -0.46
TRAIP-210ENST00000489948 HRH3Q9Y5N1 445 aa12.17□□□□□ -0.46
TRAIP-210ENST00000489948 A0A087WZY1 265 aa12.16□□□□□ -0.46
TRAIP-210ENST00000489948 A0A0B4J2E0 115 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms