RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 ARMC12Q5T9G4 340 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 ATPAF1Q5TC12 328 aaPredicted RBP4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 SFRP4Q6FHJ7 346 aaPredicted RBP4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 ZCCHC12Q6PEW1 402 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 ZNF813Q6ZN06 617 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 ABHD13Q7L211 337 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 SLC29A4Q7RTT9 530 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 OR2W3Q7Z3T1 314 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 TAC4Q86UU9 113 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 ARHGAP12Q8IWW6 846 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 CHST14Q8NCH0 376 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 FBXO15Q8NCQ5 510 aaPredicted RBP4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 OR6B3Q8NGW1 331 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 SVIPQ8NHG7 77 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 HUS1BQ8NHY5 278 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 TRMT10AQ8TBZ6 339 aaKnown RBP4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 THEM6Q8WUY1 208 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 EEF1AKMT1Q8WVE0 214 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 GEMIN6Q8WXD5 167 aaKnown RBP4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 NDRG1Q92597 394 aaKnown RBP4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 SLAMF9Q96A28 289 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 ZNF707Q96C28 371 aaPredicted RBP4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 RAB3CQ96E17 227 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 IMP4Q96G21 291 aaKnown RBP4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 SCARF2Q96GP6 870 aaPredicted RBP4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 CMTM3Q96MX0 182 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 ELF4Q99607 663 aaPredicted RBP4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 GPR21Q99679 349 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 ADAT1Q9BUB4 502 aaKnown RBP4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 NTMT1Q9BV86 223 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 TMED9Q9BVK6 235 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 TEX101Q9BY14 249 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 MRPL37Q9BZE1 423 aaKnown RBP4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 WDCPQ9H6R7 721 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 UNKLQ9H9P5 680 aaKnown RBP4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 TBC1D17Q9HA65 648 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 TPT1P8Q9HAU6 139 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 PLEKHA1Q9HB21 404 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 NOX3Q9HBY0 568 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 HRASLSQ9HDD0 168 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 PRDM5Q9NQX1 630 aaPredicted RBP4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 FAM120CQ9NX05 1096 aaKnown RBP4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 VSX1Q9NZR4 365 aaPredicted RBP4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 ZNF69Q9UC07 566 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 PISDQ9UG56 409 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 FZD4Q9ULV1 537 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 FLVCR2Q9UPI3 526 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 IRAK3Q9Y616 596 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 C2orf92A0A1B0GVN3 265 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 A0A1W2PRQ8 180 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 TMEM72A0PK05 275 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 UBE2QL1A1L167 161 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 KLRG2A4D1S0 409 aaPredicted RBP4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 PRAMEF25A6NGN4 478 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 GLTPD2A6NH11 291 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 RFPL4AA6NLU0 287 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 MARCH11A6NNE9 402 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 F5H5P2 479 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 RFPL4AL1F8VTS6 287 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 CACNB4O00305 520 aaPredicted RBP4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 CCL22O00626 93 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 ARPC1BO15143 372 aaKnown RBP4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 PGRMC2O15173 223 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 LRRTM2O43300 516 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 FGF16O43320 207 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 HYAL3O43820 417 aaPredicted RBP4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 PCDH7O60245 1069 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 NDUFS3O75489 264 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 KHDRBS3O75525 346 aaKnown RBP4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 CRTAPO75718 401 aaPredicted RBP4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 C22orf31O95567 290 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 MBP02144 154 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 SERPIND1P05546 499 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 HCKP08631 526 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 HOXB5P09067 269 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 C1SP09871 688 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 EBLN1P0CF75 366 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 LIMS3P0CW19 117 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 LIMS4P0CW20 117 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 RD3LP0DJH9 198 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 RNH1P13489 461 aaKnown RBP4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 HSD3B1P14060 373 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 RPS2P15880 293 aaKnown RBP4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 NQO2P16083 231 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 ZNF14P17017 642 aaPredicted RBP4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 HOXA5P20719 270 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 PRPH2P23942 346 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 CRABP1P29762 137 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 DDTP30046 118 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 BDKRB2P30411 391 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 CSF2RBP32927 897 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 CD86P42081 329 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 LHX1P48742 406 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 RAC1P63000 192 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 SIM1P81133 766 aaPredicted RBP4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 EFNB1P98172 346 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 ADIGQ0VDE8 80 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 IL10RAQ13651 578 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms