RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 NAP1L6A6NFF2 107 aa16.53■□□□□ 0.24
NPHP4-209ENST00000489180 PROS1P07225 676 aa16.53■□□□□ 0.24
NPHP4-209ENST00000489180 UBL4AP11441 157 aa16.53■□□□□ 0.24
NPHP4-209ENST00000489180 GABRR1P24046 479 aa16.53■□□□□ 0.24
NPHP4-209ENST00000489180 PLXDC1Q8IUK5 500 aa16.53■□□□□ 0.24
NPHP4-209ENST00000489180 ZNF695Q8IW36 515 aa16.53■□□□□ 0.24
NPHP4-209ENST00000489180 BRIX1Q8TDN6 353 aaKnown RBP16.53■□□□□ 0.24
NPHP4-209ENST00000489180 IL23AQ9NPF7 189 aa16.53■□□□□ 0.24
NPHP4-209ENST00000489180 SLC6A5Q9Y345 797 aa16.53■□□□□ 0.24
NPHP4-209ENST00000489180 GABRPO00591 440 aa16.53■□□□□ 0.24
NPHP4-209ENST00000489180 NUDT21O43809 227 aaKnown RBP16.53■□□□□ 0.24
NPHP4-209ENST00000489180 CYBAP13498 195 aa16.53■□□□□ 0.24
NPHP4-209ENST00000489180 ETV5P41161 510 aa16.53■□□□□ 0.24
NPHP4-209ENST00000489180 ALDH3B1P43353 468 aa16.53■□□□□ 0.24
NPHP4-209ENST00000489180 ZNF674Q2M3X9 581 aa16.53■□□□□ 0.24
NPHP4-209ENST00000489180 PGGHGQ32M88 737 aa16.53■□□□□ 0.24
NPHP4-209ENST00000489180 FAM69AQ5T7M9 428 aa16.53■□□□□ 0.24
NPHP4-209ENST00000489180 RTP3Q9BQQ7 232 aa16.53■□□□□ 0.24
NPHP4-209ENST00000489180 KCNIP1Q9NZI2 227 aa16.53■□□□□ 0.24
NPHP4-209ENST00000489180 V9GY05 133 aa16.53■□□□□ 0.24
NPHP4-209ENST00000489180 C1orf105O95561 183 aa16.53■□□□□ 0.24
NPHP4-209ENST00000489180 HNRNPFP52597 415 aaKnown RBP16.53■□□□□ 0.24
NPHP4-209ENST00000489180 TBCEQ15813 527 aaPredicted RBP16.53■□□□□ 0.24
NPHP4-209ENST00000489180 PAQR8Q8TEZ7 354 aa16.53■□□□□ 0.24
NPHP4-209ENST00000489180 INTS14Q96SY0 518 aa16.53■□□□□ 0.24
NPHP4-209ENST00000489180 MED20Q9H944 212 aa16.53■□□□□ 0.24
NPHP4-209ENST00000489180 COL2A1P02458 1487 aaPredicted RBP16.52■□□□□ 0.24
NPHP4-209ENST00000489180 CTSAP10619 480 aa16.52■□□□□ 0.24
NPHP4-209ENST00000489180 MAOAP21397 527 aa16.52■□□□□ 0.24
NPHP4-209ENST00000489180 AOAHP28039 575 aa16.52■□□□□ 0.24
NPHP4-209ENST00000489180 CRABP1P29762 137 aa16.52■□□□□ 0.24
NPHP4-209ENST00000489180 SLC39A5Q6ZMH5 540 aa16.52■□□□□ 0.24
NPHP4-209ENST00000489180 IL22RA1Q8N6P7 574 aa16.52■□□□□ 0.24
NPHP4-209ENST00000489180 LKAAEAR1Q8TD35 194 aa16.52■□□□□ 0.24
NPHP4-209ENST00000489180 HOXB9P17482 250 aaPredicted RBP16.52■□□□□ 0.24
NPHP4-209ENST00000489180 CEBPBP17676 345 aa16.52■□□□□ 0.24
NPHP4-209ENST00000489180 TACR1P25103 407 aa16.52■□□□□ 0.24
NPHP4-209ENST00000489180 OR1Q1Q15612 314 aa16.52■□□□□ 0.24
NPHP4-209ENST00000489180 MARCH8Q5T0T0 291 aa16.52■□□□□ 0.24
NPHP4-209ENST00000489180 TMEM102Q8N9M5 508 aaPredicted RBP16.52■□□□□ 0.24
NPHP4-209ENST00000489180 ACOT11Q8WXI4 607 aaPredicted RBP16.52■□□□□ 0.24
NPHP4-209ENST00000489180 FAM230AA0A1W2PPH8 454 aa16.52■□□□□ 0.23
NPHP4-209ENST00000489180 MEGF11A6BM72 1044 aa16.52■□□□□ 0.23
NPHP4-209ENST00000489180 OR7A17O14581 309 aa16.52■□□□□ 0.23
NPHP4-209ENST00000489180 GAAP10253 952 aa16.52■□□□□ 0.23
NPHP4-209ENST00000489180 ACP2P11117 423 aa16.52■□□□□ 0.23
NPHP4-209ENST00000489180 RABIFP47224 123 aa16.52■□□□□ 0.23
NPHP4-209ENST00000489180 CDK3Q00526 305 aa16.52■□□□□ 0.23
NPHP4-209ENST00000489180 NHSL2Q5HYW2 709 aa16.52■□□□□ 0.23
NPHP4-209ENST00000489180 TCTE1Q5JU00 501 aa16.52■□□□□ 0.23
NPHP4-209ENST00000489180 B3GLCTQ6Y288 498 aa16.52■□□□□ 0.23
NPHP4-209ENST00000489180 RHOXF1Q8NHV9 184 aa16.52■□□□□ 0.23
NPHP4-209ENST00000489180 ASB11Q8WXH4 323 aa16.52■□□□□ 0.23
NPHP4-209ENST00000489180 A0A0U1RQK1 487 aa16.52■□□□□ 0.23
NPHP4-209ENST00000489180 RAB6AP20340 208 aa16.52■□□□□ 0.23
NPHP4-209ENST00000489180 ZNF91Q05481 1191 aa16.52■□□□□ 0.23
NPHP4-209ENST00000489180 SPOCK1Q08629 439 aa16.52■□□□□ 0.23
NPHP4-209ENST00000489180 MLLT11Q13015 90 aaPredicted RBP16.52■□□□□ 0.23
NPHP4-209ENST00000489180 MLC1Q15049 377 aa16.52■□□□□ 0.23
NPHP4-209ENST00000489180 DPY19L4Q7Z388 723 aa16.52■□□□□ 0.23
NPHP4-209ENST00000489180 SGPP2Q8IWX5 399 aa16.52■□□□□ 0.23
NPHP4-209ENST00000489180 LPAR4Q99677 370 aa16.52■□□□□ 0.23
NPHP4-209ENST00000489180 BABAM2Q9NXR7 383 aa16.52■□□□□ 0.23
NPHP4-209ENST00000489180 NDUFAF4Q9P032 175 aa16.52■□□□□ 0.23
NPHP4-209ENST00000489180 HCSTQ9UBK5 93 aa16.52■□□□□ 0.23
NPHP4-209ENST00000489180 PCDHGA6Q9Y5G7 932 aa16.52■□□□□ 0.23
NPHP4-209ENST00000489180 PRAF2O60831 178 aa16.51■□□□□ 0.23
NPHP4-209ENST00000489180 BMP1P13497 986 aa16.51■□□□□ 0.23
NPHP4-209ENST00000489180 PVRP15151 417 aa16.51■□□□□ 0.23
NPHP4-209ENST00000489180 ZNF765Q7L2R6 523 aa16.51■□□□□ 0.23
NPHP4-209ENST00000489180 DTD2Q96FN9 168 aa16.51■□□□□ 0.23
NPHP4-209ENST00000489180 TMPRSS11EQ9UL52 423 aa16.51■□□□□ 0.23
NPHP4-209ENST00000489180 DVL2O14641 736 aa16.51■□□□□ 0.23
NPHP4-209ENST00000489180 ITGB7P26010 798 aa16.51■□□□□ 0.23
NPHP4-209ENST00000489180 KCNJ8Q15842 424 aa16.51■□□□□ 0.23
NPHP4-209ENST00000489180 C3P1Q6ZMU1 363 aa16.51■□□□□ 0.23
NPHP4-209ENST00000489180 ZNF704Q6ZNC4 412 aaPredicted RBP16.51■□□□□ 0.23
NPHP4-209ENST00000489180 NRARPQ7Z6K4 114 aa16.51■□□□□ 0.23
NPHP4-209ENST00000489180 CPPED1Q9BRF8 314 aaPredicted RBP16.51■□□□□ 0.23
NPHP4-209ENST00000489180 QRSL1Q9H0R6 528 aaKnown RBP16.51■□□□□ 0.23
NPHP4-209ENST00000489180 ADAMTS5Q9UNA0 930 aa16.51■□□□□ 0.23
NPHP4-209ENST00000489180 MBLAC1A4D2B0 266 aaPredicted RBP16.51■□□□□ 0.23
NPHP4-209ENST00000489180 RAC2P15153 192 aa16.51■□□□□ 0.23
NPHP4-209ENST00000489180 HNRNPA2B1P22626 353 aaKnown RBP16.51■□□□□ 0.23
NPHP4-209ENST00000489180 RPS5P46782 204 aaKnown RBP16.51■□□□□ 0.23
NPHP4-209ENST00000489180 RPS25P62851 125 aaKnown RBP16.51■□□□□ 0.23
NPHP4-209ENST00000489180 TBPL2Q6SJ96 375 aa16.51■□□□□ 0.23
NPHP4-209ENST00000489180 LAX1Q8IWV1 398 aa16.51■□□□□ 0.23
NPHP4-209ENST00000489180 TCEAL8Q8IYN2 117 aa16.51■□□□□ 0.23
NPHP4-209ENST00000489180 FAM86C1Q9NVL1 165 aa16.51■□□□□ 0.23
NPHP4-209ENST00000489180 RCE1Q9Y256 329 aa16.51■□□□□ 0.23
NPHP4-209ENST00000489180 C1SP09871 688 aa16.51■□□□□ 0.23
NPHP4-209ENST00000489180 PRKACBP22694 351 aa16.51■□□□□ 0.23
NPHP4-209ENST00000489180 BMPR1AP36894 532 aa16.51■□□□□ 0.23
NPHP4-209ENST00000489180 DUSP3P51452 185 aaPredicted RBP16.51■□□□□ 0.23
NPHP4-209ENST00000489180 CYCSP99999 105 aaKnown RBP16.51■□□□□ 0.23
NPHP4-209ENST00000489180 MC2RQ01718 297 aa16.51■□□□□ 0.23
NPHP4-209ENST00000489180 RIPPLY1Q0D2K3 151 aa16.51■□□□□ 0.23
NPHP4-209ENST00000489180 DEFB133Q30KQ1 61 aa16.51■□□□□ 0.23
NPHP4-209ENST00000489180 ZNF322Q6U7Q0 402 aaPredicted RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms