RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 STX11O75558 287 aa22.43■■□□□ 1.18
HMGN1-217ENST00000489072 FUT5Q11128 374 aa22.43■■□□□ 1.18
HMGN1-217ENST00000489072 ZNF141Q15928 474 aa22.43■■□□□ 1.18
HMGN1-217ENST00000489072 GPR119Q8TDV5 335 aa22.43■■□□□ 1.18
HMGN1-217ENST00000489072 ZNF75CPQ92670 426 aaPredicted RBP22.43■■□□□ 1.18
HMGN1-217ENST00000489072 MARK4Q96L34 752 aa22.43■■□□□ 1.18
HMGN1-217ENST00000489072 SLC35A5Q9BS91 424 aa22.43■■□□□ 1.18
HMGN1-217ENST00000489072 ZNF350Q9GZX5 532 aa22.43■■□□□ 1.18
HMGN1-217ENST00000489072 RASSF1Q9NS23 344 aa22.43■■□□□ 1.18
HMGN1-217ENST00000489072 MKLN1Q9UL63 735 aa22.43■■□□□ 1.18
HMGN1-217ENST00000489072 KLF11O14901 512 aa22.42■■□□□ 1.18
HMGN1-217ENST00000489072 ADAMDEC1O15204 470 aa22.42■■□□□ 1.18
HMGN1-217ENST00000489072 SMNDC1O75940 238 aaKnown RBP eCLIP22.42■■□□□ 1.184e-7■■■■□ 21.6
HMGN1-217ENST00000489072 NUDT14O95848 222 aa22.42■■□□□ 1.18
HMGN1-217ENST00000489072 EPXP11678 715 aa22.42■■□□□ 1.18
HMGN1-217ENST00000489072 SHC1P29353 583 aa22.42■■□□□ 1.18
HMGN1-217ENST00000489072 SUMO3P55854 103 aaPredicted RBP22.42■■□□□ 1.18
HMGN1-217ENST00000489072 DAZAP2Q15038 168 aaPredicted RBP22.42■■□□□ 1.18
HMGN1-217ENST00000489072 NXNQ6DKJ4 435 aa22.42■■□□□ 1.18
HMGN1-217ENST00000489072 C16orf62Q7Z3J2 963 aa22.42■■□□□ 1.18
HMGN1-217ENST00000489072 FBXO27Q8NI29 283 aa22.42■■□□□ 1.18
HMGN1-217ENST00000489072 XAGE5Q8WWM1 108 aa22.42■■□□□ 1.18
HMGN1-217ENST00000489072 INPP5KQ9BT40 448 aa22.42■■□□□ 1.18
HMGN1-217ENST00000489072 POLDIP3Q9BY77 421 aaKnown RBP22.42■■□□□ 1.18
HMGN1-217ENST00000489072 OPN3Q9H1Y3 402 aaPredicted RBP22.42■■□□□ 1.18
HMGN1-217ENST00000489072 EXD2Q9NVH0 621 aa22.42■■□□□ 1.18
HMGN1-217ENST00000489072 MAP1AP78559 2803 aaPredicted RBP22.42■■□□□ 1.18
HMGN1-217ENST00000489072 SERINC4A6NH21 518 aa22.41■■□□□ 1.18
HMGN1-217ENST00000489072 TNFSF11O14788 317 aa22.41■■□□□ 1.18
HMGN1-217ENST00000489072 CXCL13O43927 109 aa22.41■■□□□ 1.18
HMGN1-217ENST00000489072 UGT2B17O75795 530 aa22.41■■□□□ 1.18
HMGN1-217ENST00000489072 CGAP01215 116 aa22.41■■□□□ 1.18
HMGN1-217ENST00000489072 PGRP06401 933 aa22.41■■□□□ 1.18
HMGN1-217ENST00000489072 UBL4AP11441 157 aa22.41■■□□□ 1.18
HMGN1-217ENST00000489072 CPOXP36551 454 aa22.41■■□□□ 1.18
HMGN1-217ENST00000489072 EIF1P41567 113 aaKnown RBP22.41■■□□□ 1.18
HMGN1-217ENST00000489072 CDKN2CP42773 168 aa22.41■■□□□ 1.18
HMGN1-217ENST00000489072 PPP4R4Q6NUP7 873 aa22.41■■□□□ 1.18
HMGN1-217ENST00000489072 ZNF474Q6S9Z5 364 aaPredicted RBP22.41■■□□□ 1.18
HMGN1-217ENST00000489072 ESPNLQ6ZVH7 1005 aa22.41■■□□□ 1.18
HMGN1-217ENST00000489072 OR2V1Q8NHB1 315 aa22.41■■□□□ 1.18
HMGN1-217ENST00000489072 RFWD2Q8NHY2 731 aa22.41■■□□□ 1.18
HMGN1-217ENST00000489072 PIWIL2Q8TC59 973 aaKnown RBP22.41■■□□□ 1.18
HMGN1-217ENST00000489072 OR52B2Q96RD2 323 aa22.41■■□□□ 1.18
HMGN1-217ENST00000489072 OR52E6Q96RD3 313 aa22.41■■□□□ 1.18
HMGN1-217ENST00000489072 CLEC4MQ9H2X3 399 aaPredicted RBP22.41■■□□□ 1.18
HMGN1-217ENST00000489072 PRAMEF27A3QJZ7 478 aa22.4■■□□□ 1.18
HMGN1-217ENST00000489072 ZNF264O43296 627 aa22.4■■□□□ 1.18
HMGN1-217ENST00000489072 EIF4E2O60573 245 aaKnown RBP22.4■■□□□ 1.18
HMGN1-217ENST00000489072 AGR2O95994 175 aa22.4■■□□□ 1.18
HMGN1-217ENST00000489072 FCGR2AP12318 317 aa22.4■■□□□ 1.18
HMGN1-217ENST00000489072 PRKCAP17252 672 aa22.4■■□□□ 1.18
HMGN1-217ENST00000489072 ME2P23368 584 aa22.4■■□□□ 1.18
HMGN1-217ENST00000489072 CHI3L1P36222 383 aaPredicted RBP22.4■■□□□ 1.18
HMGN1-217ENST00000489072 KHKP50053 298 aa22.4■■□□□ 1.18
HMGN1-217ENST00000489072 TESK1Q15569 626 aa22.4■■□□□ 1.18
HMGN1-217ENST00000489072 MAPK14Q16539 360 aa22.4■■□□□ 1.18
HMGN1-217ENST00000489072 TYW3Q6IPR3 259 aaKnown RBP22.4■■□□□ 1.18
HMGN1-217ENST00000489072 LILRA2Q8N149 483 aa22.4■■□□□ 1.18
HMGN1-217ENST00000489072 ARSGQ96EG1 525 aa22.4■■□□□ 1.18
HMGN1-217ENST00000489072 KLHL15Q96M94 604 aa22.4■■□□□ 1.18
HMGN1-217ENST00000489072 GPC6Q9Y625 555 aaPredicted RBP22.4■■□□□ 1.18
HMGN1-217ENST00000489072 CCDC154A6NI56 674 aa22.39■■□□□ 1.17
HMGN1-217ENST00000489072 KIAA0513O60268 411 aa22.39■■□□□ 1.17
HMGN1-217ENST00000489072 NTN1O95631 604 aa22.39■■□□□ 1.17
HMGN1-217ENST00000489072 IDO1P14902 403 aa22.39■■□□□ 1.17
HMGN1-217ENST00000489072 ELK4P28324 431 aa22.39■■□□□ 1.17
HMGN1-217ENST00000489072 ADH6P28332 368 aa22.39■■□□□ 1.17
HMGN1-217ENST00000489072 SFTPDP35247 375 aa22.39■■□□□ 1.17
HMGN1-217ENST00000489072 FAM27E3Q08E93 113 aa22.39■■□□□ 1.17
HMGN1-217ENST00000489072 SKP2Q13309 424 aa22.39■■□□□ 1.17
HMGN1-217ENST00000489072 PDCD4Q53EL6 469 aaKnown RBP22.39■■□□□ 1.17
HMGN1-217ENST00000489072 TTMPQ5BVD1 217 aa22.39■■□□□ 1.17
HMGN1-217ENST00000489072 ATAD3BQ5T9A4 648 aa22.39■■□□□ 1.17
HMGN1-217ENST00000489072 HBMQ6B0K9 141 aa22.39■■□□□ 1.17
HMGN1-217ENST00000489072 FRRS1Q6ZNA5 592 aa22.39■■□□□ 1.17
HMGN1-217ENST00000489072 RNF130Q86XS8 419 aa22.39■■□□□ 1.17
HMGN1-217ENST00000489072 TMCO5AQ8N6Q1 288 aa22.39■■□□□ 1.17
HMGN1-217ENST00000489072 OR5W2Q8NH69 310 aa22.39■■□□□ 1.17
HMGN1-217ENST00000489072 ROPN1LQ96C74 230 aa22.39■■□□□ 1.17
HMGN1-217ENST00000489072 ATP6V1G3Q96LB4 118 aa22.39■■□□□ 1.17
HMGN1-217ENST00000489072 PANX1Q96RD7 426 aa22.39■■□□□ 1.17
HMGN1-217ENST00000489072 ZBTB18Q99592 522 aa22.39■■□□□ 1.17
HMGN1-217ENST00000489072 PRRG4Q9BZD6 226 aa22.39■■□□□ 1.17
HMGN1-217ENST00000489072 SAP130Q9H0E3 1048 aa22.39■■□□□ 1.17
HMGN1-217ENST00000489072 LIME1Q9H400 295 aa22.39■■□□□ 1.17
HMGN1-217ENST00000489072 PAQR5Q9NXK6 330 aaPredicted RBP22.39■■□□□ 1.17
HMGN1-217ENST00000489072 CLEC4AQ9UMR7 237 aa22.39■■□□□ 1.17
HMGN1-217ENST00000489072 WDR45Q9Y484 360 aa22.39■■□□□ 1.17
HMGN1-217ENST00000489072 HMGN4O00479 90 aa22.38■■□□□ 1.17
HMGN1-217ENST00000489072 GSNP06396 782 aa22.38■■□□□ 1.17
HMGN1-217ENST00000489072 GUSBP08236 651 aa22.38■■□□□ 1.17
HMGN1-217ENST00000489072 DNAJA1P31689 397 aaKnown RBP22.38■■□□□ 1.17
HMGN1-217ENST00000489072 CCR4P51679 360 aa22.38■■□□□ 1.17
HMGN1-217ENST00000489072 AP1ARQ63HQ0 302 aa22.38■■□□□ 1.17
HMGN1-217ENST00000489072 FAM214BQ7L5A3 538 aa22.38■■□□□ 1.17
HMGN1-217ENST00000489072 CDC20BQ86Y33 519 aa22.38■■□□□ 1.17
HMGN1-217ENST00000489072 GLB1L3Q8NCI6 653 aaPredicted RBP22.38■■□□□ 1.17
HMGN1-217ENST00000489072 TOR1AIP2Q8NFQ8 470 aa22.38■■□□□ 1.17
HMGN1-217ENST00000489072 OSTF1Q92882 214 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms