RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 MAGEA8P43361 318 aa17.78■□□□□ 0.44
CCM2-216ENST00000488727 LIMS1P48059 325 aa17.78■□□□□ 0.44
CCM2-216ENST00000488727 RPS26P62854 115 aaKnown RBP17.78■□□□□ 0.44
CCM2-216ENST00000488727 SLC35A2P78381 396 aa17.78■□□□□ 0.44
CCM2-216ENST00000488727 SPIBQ01892 262 aa17.78■□□□□ 0.44
CCM2-216ENST00000488727 LYPD8Q6UX82 237 aa17.78■□□□□ 0.44
CCM2-216ENST00000488727 HORMAD2Q8N7B1 307 aa17.78■□□□□ 0.44
CCM2-216ENST00000488727 SLC16A11Q8NCK7 471 aa17.78■□□□□ 0.44
CCM2-216ENST00000488727 OR10G2Q8NGC3 310 aa17.78■□□□□ 0.44
CCM2-216ENST00000488727 C9orf43Q8TAL5 461 aaPredicted RBP17.78■□□□□ 0.44
CCM2-216ENST00000488727 PIP5K1AQ99755 562 aa17.78■□□□□ 0.44
CCM2-216ENST00000488727 NAA50Q9GZZ1 169 aaKnown RBP17.78■□□□□ 0.44
CCM2-216ENST00000488727 CCNB1IP1Q9NPC3 277 aa17.78■□□□□ 0.44
CCM2-216ENST00000488727 ZNF71Q9NQZ8 489 aaPredicted RBP17.78■□□□□ 0.44
CCM2-216ENST00000488727 SCN3BQ9NY72 215 aa17.78■□□□□ 0.44
CCM2-216ENST00000488727 POFUT2Q9Y2G5 429 aa17.78■□□□□ 0.44
CCM2-216ENST00000488727 ZNF451Q9Y4E5 1061 aa17.78■□□□□ 0.44
CCM2-216ENST00000488727 ENPP4Q9Y6X5 453 aa17.78■□□□□ 0.44
CCM2-216ENST00000488727 ARRDC5A6NEK1 342 aa17.77■□□□□ 0.44
CCM2-216ENST00000488727 TNFRSF1BP20333 461 aa17.77■□□□□ 0.44
CCM2-216ENST00000488727 TRHRP34981 398 aaPredicted RBP17.77■□□□□ 0.44
CCM2-216ENST00000488727 SSR4P51571 173 aa17.77■□□□□ 0.44
CCM2-216ENST00000488727 HMGA2P52926 109 aa17.77■□□□□ 0.44
CCM2-216ENST00000488727 DCAF7P61962 342 aa17.77■□□□□ 0.44
CCM2-216ENST00000488727 RPP38P78345 283 aaKnown RBP17.77■□□□□ 0.44
CCM2-216ENST00000488727 LY6DQ14210 128 aa17.77■□□□□ 0.44
CCM2-216ENST00000488727 MICAQ29983 383 aa17.77■□□□□ 0.44
CCM2-216ENST00000488727 TUBA3EQ6PEY2 450 aa17.77■□□□□ 0.44
CCM2-216ENST00000488727 IGFL3Q6UXB1 125 aa17.77■□□□□ 0.44
CCM2-216ENST00000488727 SLC44A2Q8IWA5 706 aaPredicted RBP17.77■□□□□ 0.44
CCM2-216ENST00000488727 PRR22Q8IZ63 422 aa17.77■□□□□ 0.44
CCM2-216ENST00000488727 CDRT4Q8N9R6 151 aa17.77■□□□□ 0.44
CCM2-216ENST00000488727 OR4N2Q8NGD1 307 aa17.77■□□□□ 0.44
CCM2-216ENST00000488727 RNF32Q9H0A6 362 aa17.77■□□□□ 0.44
CCM2-216ENST00000488727 PCDHGB7Q9Y5F8 929 aa17.77■□□□□ 0.44
CCM2-216ENST00000488727 BSNQ9UPA5 3926 aa17.77■□□□□ 0.43
CCM2-216ENST00000488727 ATRXP46100 2492 aa17.76■□□□□ 0.43
CCM2-216ENST00000488727 PDE9AO76083 593 aa17.76■□□□□ 0.43
CCM2-216ENST00000488727 CD96P40200 585 aa17.76■□□□□ 0.43
CCM2-216ENST00000488727 MAN2A2P49641 1150 aa17.76■□□□□ 0.43
CCM2-216ENST00000488727 CSNK2BP67870 215 aa17.76■□□□□ 0.43
CCM2-216ENST00000488727 TEKQ02763 1124 aa17.76■□□□□ 0.43
CCM2-216ENST00000488727 KCNC4Q03721 635 aa17.76■□□□□ 0.43
CCM2-216ENST00000488727 DUSP5Q16690 384 aa17.76■□□□□ 0.43
CCM2-216ENST00000488727 BHLHB9Q6PI77 547 aa17.76■□□□□ 0.43
CCM2-216ENST00000488727 ASB18Q6ZVZ8 466 aa17.76■□□□□ 0.43
CCM2-216ENST00000488727 CCDC71Q8IV32 467 aaPredicted RBP17.76■□□□□ 0.43
CCM2-216ENST00000488727 TMEM156Q8N614 296 aa17.76■□□□□ 0.43
CCM2-216ENST00000488727 SLC22A8Q8TCC7 542 aa17.76■□□□□ 0.43
CCM2-216ENST00000488727 IPCEF1Q8WWN9 437 aaPredicted RBP17.76■□□□□ 0.43
CCM2-216ENST00000488727 SLC9A6Q92581 669 aa17.76■□□□□ 0.43
CCM2-216ENST00000488727 HAS2Q92819 552 aa17.76■□□□□ 0.43
CCM2-216ENST00000488727 BCL7BQ9BQE9 202 aa17.76■□□□□ 0.43
CCM2-216ENST00000488727 ACTRT3Q9BYD9 372 aa17.76■□□□□ 0.43
CCM2-216ENST00000488727 ABI3Q9P2A4 366 aa17.76■□□□□ 0.43
CCM2-216ENST00000488727 TO15178 435 aa17.75■□□□□ 0.43
CCM2-216ENST00000488727 XPNPEP2O43895 674 aa17.75■□□□□ 0.43
CCM2-216ENST00000488727 NKX2-2O95096 273 aa17.75■□□□□ 0.43
CCM2-216ENST00000488727 RHCEP18577 417 aa17.75■□□□□ 0.43
CCM2-216ENST00000488727 CCNA2P20248 432 aa17.75■□□□□ 0.43
CCM2-216ENST00000488727 CD247P20963 164 aa17.75■□□□□ 0.43
CCM2-216ENST00000488727 ABCD3P28288 659 aa17.75■□□□□ 0.43
CCM2-216ENST00000488727 EPHA2P29317 976 aa17.75■□□□□ 0.43
CCM2-216ENST00000488727 FMO3P31513 532 aa17.75■□□□□ 0.43
CCM2-216ENST00000488727 GGT2P36268 569 aa17.75■□□□□ 0.43
CCM2-216ENST00000488727 DCTN2Q13561 401 aaKnown RBP17.75■□□□□ 0.43
CCM2-216ENST00000488727 ZNHIT3Q15649 155 aaPredicted RBP17.75■□□□□ 0.43
CCM2-216ENST00000488727 EXOC3L2Q2M3D2 409 aa17.75■□□□□ 0.43
CCM2-216ENST00000488727 CDC73Q6P1J9 531 aa17.75■□□□□ 0.43
CCM2-216ENST00000488727 ZCCHC12Q6PEW1 402 aa17.75■□□□□ 0.43
CCM2-216ENST00000488727 ZNF227Q86WZ6 799 aa17.75■□□□□ 0.43
CCM2-216ENST00000488727 TAGAPQ8N103 731 aa17.75■□□□□ 0.43
CCM2-216ENST00000488727 SLC15A4Q8N697 577 aa17.75■□□□□ 0.43
CCM2-216ENST00000488727 OR5D16Q8NGK9 328 aa17.75■□□□□ 0.43
CCM2-216ENST00000488727 ASB15Q8WXK1 588 aa17.75■□□□□ 0.43
CCM2-216ENST00000488727 PIK3R3Q92569 461 aa17.75■□□□□ 0.43
CCM2-216ENST00000488727 HSPBAP1Q96EW2 488 aa17.75■□□□□ 0.43
CCM2-216ENST00000488727 SLC35G5Q96KT7 338 aa17.75■□□□□ 0.43
CCM2-216ENST00000488727 FEVQ99581 238 aa17.75■□□□□ 0.43
CCM2-216ENST00000488727 NPFFR2Q9Y5X5 522 aa17.75■□□□□ 0.43
CCM2-216ENST00000488727 A0A1W2PPW3 197 aa17.75■□□□□ 0.43
CCM2-216ENST00000488727 OR5H15A6NDH6 313 aa17.75■□□□□ 0.43
CCM2-216ENST00000488727 ZNF99A8MXY4 864 aaPredicted RBP17.75■□□□□ 0.43
CCM2-216ENST00000488727 C5orf58C9J3I9 102 aa17.75■□□□□ 0.43
CCM2-216ENST00000488727 TFPTP0C1Z6 253 aa17.75■□□□□ 0.43
CCM2-216ENST00000488727 GABRA3P34903 492 aa17.75■□□□□ 0.43
CCM2-216ENST00000488727 OR1E2P47887 323 aa17.75■□□□□ 0.43
CCM2-216ENST00000488727 GP2P55259 537 aaKnown RBP17.75■□□□□ 0.43
CCM2-216ENST00000488727 CDH12P55289 794 aa17.75■□□□□ 0.43
CCM2-216ENST00000488727 ARG2P78540 354 aa17.75■□□□□ 0.43
CCM2-216ENST00000488727 HPCAP84074 193 aa17.75■□□□□ 0.43
CCM2-216ENST00000488727 MVKQ03426 396 aa17.75■□□□□ 0.43
CCM2-216ENST00000488727 PIGFQ07326 219 aa17.75■□□□□ 0.43
CCM2-216ENST00000488727 NFATC3Q12968 1075 aa17.75■□□□□ 0.43
CCM2-216ENST00000488727 IL20RBQ6UXL0 311 aa17.75■□□□□ 0.43
CCM2-216ENST00000488727 RBMXL3Q8N7X1 1067 aaKnown RBP17.75■□□□□ 0.43
CCM2-216ENST00000488727 SLC38A5Q8WUX1 472 aa17.75■□□□□ 0.43
CCM2-216ENST00000488727 FAR1Q8WVX9 515 aa17.75■□□□□ 0.43
CCM2-216ENST00000488727 TMEM19Q96HH6 336 aa17.75■□□□□ 0.43
CCM2-216ENST00000488727 SIGLEC12Q96PQ1 595 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms