RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 C14orf79Q96F83 325 aa14.35□□□□□ -0.11
CTDSP1-209ENST00000488627 ZNF845Q96IR2 970 aaPredicted RBP14.35□□□□□ -0.11
CTDSP1-209ENST00000488627 ITCHQ96J02 903 aa14.35□□□□□ -0.11
CTDSP1-209ENST00000488627 ZFP3Q96NJ6 502 aa14.35□□□□□ -0.11
CTDSP1-209ENST00000488627 TRNT1Q96Q11 434 aaKnown RBP14.35□□□□□ -0.11
CTDSP1-209ENST00000488627 LAT2Q9GZY6 243 aa14.35□□□□□ -0.11
CTDSP1-209ENST00000488627 SLC38A1Q9H2H9 487 aa14.35□□□□□ -0.11
CTDSP1-209ENST00000488627 L3MBTL1Q9Y468 752 aa14.35□□□□□ -0.11
CTDSP1-209ENST00000488627 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.34□□□□□ -0.11
CTDSP1-209ENST00000488627 ZNF264O43296 627 aa14.34□□□□□ -0.11
CTDSP1-209ENST00000488627 TNFSF13O75888 250 aa14.34□□□□□ -0.11
CTDSP1-209ENST00000488627 H6PDO95479 791 aa14.34□□□□□ -0.11
CTDSP1-209ENST00000488627 KRT75O95678 551 aa14.34□□□□□ -0.11
CTDSP1-209ENST00000488627 CHRM4P08173 479 aa14.34□□□□□ -0.11
CTDSP1-209ENST00000488627 UBL4AP11441 157 aa14.34□□□□□ -0.11
CTDSP1-209ENST00000488627 ADH6P28332 368 aa14.34□□□□□ -0.11
CTDSP1-209ENST00000488627 PGM1P36871 562 aa14.34□□□□□ -0.11
CTDSP1-209ENST00000488627 EIF1P41567 113 aaKnown RBP14.34□□□□□ -0.11
CTDSP1-209ENST00000488627 MAGEA8P43361 318 aa14.34□□□□□ -0.11
CTDSP1-209ENST00000488627 PLAURQ03405 335 aa14.34□□□□□ -0.11
CTDSP1-209ENST00000488627 FOXF1Q12946 379 aa14.34□□□□□ -0.11
CTDSP1-209ENST00000488627 FGFBP1Q14512 234 aa14.34□□□□□ -0.11
CTDSP1-209ENST00000488627 SYPL1Q16563 259 aa14.34□□□□□ -0.11
CTDSP1-209ENST00000488627 SLC25A53Q5H9E4 307 aa14.34□□□□□ -0.11
CTDSP1-209ENST00000488627 DNAJC14Q6Y2X3 702 aaPredicted RBP14.34□□□□□ -0.11
CTDSP1-209ENST00000488627 GCNT2Q8N0V5 402 aa14.34□□□□□ -0.11
CTDSP1-209ENST00000488627 ZNF619Q8N2I2 560 aa14.34□□□□□ -0.11
CTDSP1-209ENST00000488627 FAM71CQ8NEG0 241 aa14.34□□□□□ -0.11
CTDSP1-209ENST00000488627 TOR1AIP2Q8NFQ8 470 aa14.34□□□□□ -0.11
CTDSP1-209ENST00000488627 OR5W2Q8NH69 310 aa14.34□□□□□ -0.11
CTDSP1-209ENST00000488627 RFWD2Q8NHY2 731 aa14.34□□□□□ -0.11
CTDSP1-209ENST00000488627 SMPDL3BQ92485 455 aa14.34□□□□□ -0.11
CTDSP1-209ENST00000488627 THOC1Q96FV9 657 aaKnown RBP14.34□□□□□ -0.11
CTDSP1-209ENST00000488627 AURKBQ96GD4 344 aaPredicted RBP14.34□□□□□ -0.11
CTDSP1-209ENST00000488627 SFXN3Q9BWM7 321 aa14.34□□□□□ -0.11
CTDSP1-209ENST00000488627 PINK1Q9BXM7 581 aa14.34□□□□□ -0.11
CTDSP1-209ENST00000488627 PAIP1Q9H074 479 aaKnown RBP14.34□□□□□ -0.11
CTDSP1-209ENST00000488627 RMND5AQ9H871 391 aa14.34□□□□□ -0.11
CTDSP1-209ENST00000488627 TPT1P8Q9HAU6 139 aa14.34□□□□□ -0.11
CTDSP1-209ENST00000488627 LIPT1Q9Y234 373 aa14.34□□□□□ -0.11
CTDSP1-209ENST00000488627 ZNF175Q9Y473 711 aa14.34□□□□□ -0.11
CTDSP1-209ENST00000488627 PCDHB14Q9Y5E9 798 aa14.34□□□□□ -0.11
CTDSP1-209ENST00000488627 A0A0J9YW62 118 aa14.33□□□□□ -0.12
CTDSP1-209ENST00000488627 SLC22A20A6NK97 555 aa14.33□□□□□ -0.12
CTDSP1-209ENST00000488627 CSTAP01040 98 aa14.33□□□□□ -0.12
CTDSP1-209ENST00000488627 OPN1LWP04000 364 aa14.33□□□□□ -0.12
CTDSP1-209ENST00000488627 PRKCAP17252 672 aa14.33□□□□□ -0.12
CTDSP1-209ENST00000488627 SHC1P29353 583 aa14.33□□□□□ -0.12
CTDSP1-209ENST00000488627 ASCL1P50553 236 aa14.33□□□□□ -0.12
CTDSP1-209ENST00000488627 ATP4BP51164 291 aa14.33□□□□□ -0.12
CTDSP1-209ENST00000488627 GPAT3Q53EU6 434 aa14.33□□□□□ -0.12
CTDSP1-209ENST00000488627 SLC2A7Q6PXP3 512 aa14.33□□□□□ -0.12
CTDSP1-209ENST00000488627 LRRC74BQ6ZQY2 392 aa14.33□□□□□ -0.12
CTDSP1-209ENST00000488627 CHMP1BQ7LBR1 199 aa14.33□□□□□ -0.12
CTDSP1-209ENST00000488627 GDF7Q7Z4P5 450 aa14.33□□□□□ -0.12
CTDSP1-209ENST00000488627 FBXO27Q8NI29 283 aa14.33□□□□□ -0.12
CTDSP1-209ENST00000488627 FNDC9Q8TBE3 224 aa14.33□□□□□ -0.12
CTDSP1-209ENST00000488627 QRSL1Q9H0R6 528 aaKnown RBP14.33□□□□□ -0.12
CTDSP1-209ENST00000488627 ZNF385DQ9H6B1 395 aa14.33□□□□□ -0.12
CTDSP1-209ENST00000488627 RNF122Q9H9V4 155 aa14.33□□□□□ -0.12
CTDSP1-209ENST00000488627 TMEM45AQ9NWC5 275 aa14.33□□□□□ -0.12
CTDSP1-209ENST00000488627 GPC6Q9Y625 555 aaPredicted RBP14.33□□□□□ -0.12
CTDSP1-209ENST00000488627 INTS1Q8N201 2190 aaKnown RBP14.33□□□□□ -0.12
CTDSP1-209ENST00000488627 A0A1W2PNV4 684 aa14.32□□□□□ -0.12
CTDSP1-209ENST00000488627 AGAP5A6NIR3 686 aa14.32□□□□□ -0.12
CTDSP1-209ENST00000488627 CLDN24A6NM45 220 aa14.32□□□□□ -0.12
CTDSP1-209ENST00000488627 AQP8O94778 261 aa14.32□□□□□ -0.12
CTDSP1-209ENST00000488627 CRHP06850 196 aa14.32□□□□□ -0.12
CTDSP1-209ENST00000488627 TFPTP0C1Z6 253 aa14.32□□□□□ -0.12
CTDSP1-209ENST00000488627 UBTFL6P0CB48 400 aaPredicted RBP14.32□□□□□ -0.12
CTDSP1-209ENST00000488627 ETFAP13804 333 aa14.32□□□□□ -0.12
CTDSP1-209ENST00000488627 NID1P14543 1247 aa14.32□□□□□ -0.12
CTDSP1-209ENST00000488627 CAPN3P20807 821 aa14.32□□□□□ -0.12
CTDSP1-209ENST00000488627 KIR2DL2P43627 348 aaPredicted RBP14.32□□□□□ -0.12
CTDSP1-209ENST00000488627 SLC6A8P48029 635 aa14.32□□□□□ -0.12
CTDSP1-209ENST00000488627 ANXA11P50995 505 aaKnown RBP14.32□□□□□ -0.12
CTDSP1-209ENST00000488627 RPS3AP61247 264 aaKnown RBP14.32□□□□□ -0.12
CTDSP1-209ENST00000488627 STX1BP61266 288 aa14.32□□□□□ -0.12
CTDSP1-209ENST00000488627 SNTB1Q13884 538 aaKnown RBP14.32□□□□□ -0.12
CTDSP1-209ENST00000488627 PON3Q15166 354 aa14.32□□□□□ -0.12
CTDSP1-209ENST00000488627 GUSBP1Q15486 140 aa14.32□□□□□ -0.12
CTDSP1-209ENST00000488627 EIF3MQ7L2H7 374 aaKnown RBP14.32□□□□□ -0.12
CTDSP1-209ENST00000488627 HMGN2P46Q86SG4 172 aa14.32□□□□□ -0.12
CTDSP1-209ENST00000488627 MSRB3Q8IXL7 192 aa14.32□□□□□ -0.12
CTDSP1-209ENST00000488627 LILRA2Q8N149 483 aa14.32□□□□□ -0.12
CTDSP1-209ENST00000488627 OR10D3Q8NH80 312 aa14.32□□□□□ -0.12
CTDSP1-209ENST00000488627 RNASE6Q93091 150 aaKnown RBP14.32□□□□□ -0.12
CTDSP1-209ENST00000488627 MRGPRX4Q96LA9 322 aa14.32□□□□□ -0.12
CTDSP1-209ENST00000488627 THUMPD3Q9BV44 507 aaKnown RBP14.32□□□□□ -0.12
CTDSP1-209ENST00000488627 ACBD3Q9H3P7 528 aa14.32□□□□□ -0.12
CTDSP1-209ENST00000488627 TMEM185BQ9H7F4 350 aa14.32□□□□□ -0.12
CTDSP1-209ENST00000488627 MTHFD2LQ9H903 347 aaPredicted RBP14.32□□□□□ -0.12
CTDSP1-209ENST00000488627 SLC25A37Q9NYZ2 338 aa14.32□□□□□ -0.12
CTDSP1-209ENST00000488627 CCDC167Q9P0B6 97 aa14.32□□□□□ -0.12
CTDSP1-209ENST00000488627 SLAMF8Q9P0V8 285 aa14.32□□□□□ -0.12
CTDSP1-209ENST00000488627 STOML1Q9UBI4 398 aa14.32□□□□□ -0.12
CTDSP1-209ENST00000488627 DCTN4Q9UJW0 460 aa14.32□□□□□ -0.12
CTDSP1-209ENST00000488627 A0A096LPI6 279 aa14.31□□□□□ -0.12
CTDSP1-209ENST00000488627 EIF1AYO14602 144 aaKnown RBP14.31□□□□□ -0.12
CTDSP1-209ENST00000488627 ADAM11O75078 769 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms