RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-215ENST00000487563 RNF103-CHMP3A0A140T963 221 aa21.1■□□□□ 0.97
PLOD3-215ENST00000487563 TUBBP07437 444 aa21.1■□□□□ 0.97
PLOD3-215ENST00000487563 NDUFAF6Q330K2 333 aa21.1■□□□□ 0.97
PLOD3-215ENST00000487563 WFDC11Q8NEX6 87 aa21.1■□□□□ 0.97
PLOD3-215ENST00000487563 ATP6V1C2Q8NEY4 427 aa21.1■□□□□ 0.97
PLOD3-215ENST00000487563 DPY30Q9C005 99 aa21.1■□□□□ 0.97
PLOD3-215ENST00000487563 C12orf49Q9H741 205 aa21.1■□□□□ 0.97
PLOD3-215ENST00000487563 ZNF395Q9H8N7 513 aaPredicted RBP21.1■□□□□ 0.97
PLOD3-215ENST00000487563 AKTIPQ9H8T0 292 aa21.1■□□□□ 0.97
PLOD3-215ENST00000487563 ICAM5Q9UMF0 924 aa21.1■□□□□ 0.97
PLOD3-215ENST00000487563 RAP2CQ9Y3L5 183 aa21.1■□□□□ 0.97
PLOD3-215ENST00000487563 ACTL7BQ9Y614 415 aa21.1■□□□□ 0.97
PLOD3-215ENST00000487563 MAP1AP78559 2803 aaPredicted RBP21.1■□□□□ 0.97
PLOD3-215ENST00000487563 DUXAA6NLW8 204 aa21.09■□□□□ 0.97
PLOD3-215ENST00000487563 TM9SF1O15321 606 aa21.09■□□□□ 0.97
PLOD3-215ENST00000487563 AK1P00568 194 aa21.09■□□□□ 0.97
PLOD3-215ENST00000487563 UBL4AP11441 157 aa21.09■□□□□ 0.97
PLOD3-215ENST00000487563 PPP3CBP16298 524 aa21.09■□□□□ 0.97
PLOD3-215ENST00000487563 MATN1P21941 496 aa21.09■□□□□ 0.97
PLOD3-215ENST00000487563 ADH6P28332 368 aa21.09■□□□□ 0.97
PLOD3-215ENST00000487563 SHC1P29353 583 aa21.09■□□□□ 0.97
PLOD3-215ENST00000487563 AGTR1P30556 359 aa21.09■□□□□ 0.97
PLOD3-215ENST00000487563 NKX6-1P78426 367 aaPredicted RBP21.09■□□□□ 0.97
PLOD3-215ENST00000487563 ZNF239Q16600 458 aaKnown RBP21.09■□□□□ 0.97
PLOD3-215ENST00000487563 BEND4Q6ZU67 534 aa21.09■□□□□ 0.97
PLOD3-215ENST00000487563 C6orf120Q7Z4R8 191 aa21.09■□□□□ 0.97
PLOD3-215ENST00000487563 TOR1AIP2Q8NFQ8 470 aa21.09■□□□□ 0.97
PLOD3-215ENST00000487563 OR4A15Q8NGL6 344 aa21.09■□□□□ 0.97
PLOD3-215ENST00000487563 ROBO4Q8WZ75 1007 aa21.09■□□□□ 0.97
PLOD3-215ENST00000487563 CPNE4Q96A23 557 aaPredicted RBP21.09■□□□□ 0.97
PLOD3-215ENST00000487563 SDF2Q99470 211 aa21.09■□□□□ 0.97
PLOD3-215ENST00000487563 PARD6BQ9BYG5 372 aa21.09■□□□□ 0.97
PLOD3-215ENST00000487563 SSU72Q9NP77 194 aaKnown RBP21.09■□□□□ 0.97
PLOD3-215ENST00000487563 NUP214P35658 2090 aaPredicted RBP21.08■□□□□ 0.97
PLOD3-215ENST00000487563 NPIPB9F8W1W9 429 aa21.08■□□□□ 0.97
PLOD3-215ENST00000487563 ZNF195O14628 629 aa21.08■□□□□ 0.97
PLOD3-215ENST00000487563 SMPD2O60906 423 aa21.08■□□□□ 0.97
PLOD3-215ENST00000487563 SNUPNO95149 360 aaKnown RBP21.08■□□□□ 0.97
PLOD3-215ENST00000487563 FOSL1P15407 271 aa21.08■□□□□ 0.97
PLOD3-215ENST00000487563 FPR1P21462 350 aa21.08■□□□□ 0.97
PLOD3-215ENST00000487563 SLC1A6P48664 564 aa21.08■□□□□ 0.97
PLOD3-215ENST00000487563 GPR68Q15743 365 aa21.08■□□□□ 0.97
PLOD3-215ENST00000487563 TMEM201Q5SNT2 666 aa21.08■□□□□ 0.97
PLOD3-215ENST00000487563 PDZK1Q5T2W1 519 aa21.08■□□□□ 0.97
PLOD3-215ENST00000487563 C16orf62Q7Z3J2 963 aa21.08■□□□□ 0.97
PLOD3-215ENST00000487563 P3H2Q8IVL5 708 aa21.08■□□□□ 0.97
PLOD3-215ENST00000487563 KIRREL3Q8IZU9 778 aa21.08■□□□□ 0.97
PLOD3-215ENST00000487563 CLEC4FQ8N1N0 589 aa21.08■□□□□ 0.97
PLOD3-215ENST00000487563 PIGTQ969N2 578 aa21.08■□□□□ 0.97
PLOD3-215ENST00000487563 KCNK9Q9NPC2 374 aa21.08■□□□□ 0.97
PLOD3-215ENST00000487563 EPB41L3Q9Y2J2 1087 aaPredicted RBP21.08■□□□□ 0.97
PLOD3-215ENST00000487563 RNASET2O00584 256 aaKnown RBP21.07■□□□□ 0.96
PLOD3-215ENST00000487563 ZNF264O43296 627 aa21.07■□□□□ 0.96
PLOD3-215ENST00000487563 ARHGEF9O43307 516 aa21.07■□□□□ 0.96
PLOD3-215ENST00000487563 EIF4E2O60573 245 aaKnown RBP21.07■□□□□ 0.96
PLOD3-215ENST00000487563 CYP7B1O75881 506 aa21.07■□□□□ 0.96
PLOD3-215ENST00000487563 PRKCAP17252 672 aa21.07■□□□□ 0.96
PLOD3-215ENST00000487563 SLC7A1P30825 629 aa21.07■□□□□ 0.96
PLOD3-215ENST00000487563 HOXC12P31275 282 aa21.07■□□□□ 0.96
PLOD3-215ENST00000487563 RPL14P50914 215 aaKnown RBP21.07■□□□□ 0.96
PLOD3-215ENST00000487563 SELENBP1Q13228 472 aa21.07■□□□□ 0.96
PLOD3-215ENST00000487563 CBFBQ13951 182 aa21.07■□□□□ 0.96
PLOD3-215ENST00000487563 RNPS1Q15287 305 aaKnown RBP21.07■□□□□ 0.96
PLOD3-215ENST00000487563 TOMM34Q15785 309 aaPredicted RBP21.07■□□□□ 0.96
PLOD3-215ENST00000487563 ACKR1Q16570 336 aa21.07■□□□□ 0.96
PLOD3-215ENST00000487563 TMEM176BQ3YBM2 270 aaPredicted RBP21.07■□□□□ 0.96
PLOD3-215ENST00000487563 CEP85LQ5SZL2 805 aa21.07■□□□□ 0.96
PLOD3-215ENST00000487563 SHEQ5VZ18 495 aa21.07■□□□□ 0.96
PLOD3-215ENST00000487563 STAC2Q6ZMT1 411 aa21.07■□□□□ 0.96
PLOD3-215ENST00000487563 GPR119Q8TDV5 335 aa21.07■□□□□ 0.96
PLOD3-215ENST00000487563 RNF128Q8TEB7 428 aa21.07■□□□□ 0.96
PLOD3-215ENST00000487563 ZFP90Q8TF47 636 aa21.07■□□□□ 0.96
PLOD3-215ENST00000487563 ABHD3Q8WU67 409 aa21.07■□□□□ 0.96
PLOD3-215ENST00000487563 ARL8AQ96BM9 186 aa21.07■□□□□ 0.96
PLOD3-215ENST00000487563 MRGPRX4Q96LA9 322 aa21.07■□□□□ 0.96
PLOD3-215ENST00000487563 HS3ST6Q96QI5 342 aa21.07■□□□□ 0.96
PLOD3-215ENST00000487563 CCL19Q99731 98 aa21.07■□□□□ 0.96
PLOD3-215ENST00000487563 SRXN1Q9BYN0 137 aa21.07■□□□□ 0.96
PLOD3-215ENST00000487563 NMUR2Q9GZQ4 415 aa21.07■□□□□ 0.96
PLOD3-215ENST00000487563 SERHL2Q9H4I8 314 aa21.07■□□□□ 0.96
PLOD3-215ENST00000487563 DLL4Q9NR61 685 aa21.07■□□□□ 0.96
PLOD3-215ENST00000487563 EXD2Q9NVH0 621 aa21.07■□□□□ 0.96
PLOD3-215ENST00000487563 ACANP16112 2415 aa21.07■□□□□ 0.96
PLOD3-215ENST00000487563 SERINC4A6NH21 518 aa21.06■□□□□ 0.96
PLOD3-215ENST00000487563 STX11O75558 287 aa21.06■□□□□ 0.96
PLOD3-215ENST00000487563 CPSF4O95639 269 aaKnown RBP21.06■□□□□ 0.96
PLOD3-215ENST00000487563 BGNP21810 368 aa21.06■□□□□ 0.96
PLOD3-215ENST00000487563 QPRTQ15274 297 aa21.06■□□□□ 0.96
PLOD3-215ENST00000487563 BEX5Q5H9J7 111 aa21.06■□□□□ 0.96
PLOD3-215ENST00000487563 ANXA8L1Q5VT79 327 aa21.06■□□□□ 0.96
PLOD3-215ENST00000487563 ANKRD46Q86W74 232 aa21.06■□□□□ 0.96
PLOD3-215ENST00000487563 CXorf67Q86X51 503 aaPredicted RBP21.06■□□□□ 0.96
PLOD3-215ENST00000487563 VPS37AQ8NEZ2 397 aa21.06■□□□□ 0.96
PLOD3-215ENST00000487563 OR8J2Q8NGG1 315 aa21.06■□□□□ 0.96
PLOD3-215ENST00000487563 OR5W2Q8NH69 310 aa21.06■□□□□ 0.96
PLOD3-215ENST00000487563 ACTR6Q9GZN1 396 aa21.06■□□□□ 0.96
PLOD3-215ENST00000487563 FLNAP21333 2647 aaKnown RBP21.06■□□□□ 0.96
PLOD3-215ENST00000487563 EFNA2O43921 213 aa21.05■□□□□ 0.96
PLOD3-215ENST00000487563 STX3Q13277 289 aa21.05■□□□□ 0.96
PLOD3-215ENST00000487563 ATAD3BQ5T9A4 648 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms