RNA–Protein interactions for RNA: ENST00000487539.1

CNN3-206, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-206ENST00000487539 EBAG9O00559 213 aa3.78□□□□□ -1.8
CNN3-206ENST00000487539 PSMA7O14818 248 aa3.78□□□□□ -1.8
CNN3-206ENST00000487539 LCMT2O60294 686 aaKnown RBP3.78□□□□□ -1.8
CNN3-206ENST00000487539 PIP5K1CO60331 668 aa3.78□□□□□ -1.8
CNN3-206ENST00000487539 TRIM3O75382 744 aaPredicted RBP3.78□□□□□ -1.8
CNN3-206ENST00000487539 PDE5AO76074 875 aa3.78□□□□□ -1.8
CNN3-206ENST00000487539 ZFAND5O76080 213 aa3.78□□□□□ -1.8
CNN3-206ENST00000487539 C1QAP02745 245 aa3.78□□□□□ -1.8
CNN3-206ENST00000487539 RALBP11234 206 aa3.78□□□□□ -1.8
CNN3-206ENST00000487539 ATP1A3P13637 1013 aa3.78□□□□□ -1.8
CNN3-206ENST00000487539 UCHL3P15374 230 aa3.78□□□□□ -1.8
CNN3-206ENST00000487539 C21orf33P30042 268 aaPredicted RBP3.78□□□□□ -1.8
CNN3-206ENST00000487539 SERPINB6P35237 376 aa3.78□□□□□ -1.8
CNN3-206ENST00000487539 CCT5P48643 541 aa3.78□□□□□ -1.8
CNN3-206ENST00000487539 CDK9P50750 372 aaKnown RBP3.78□□□□□ -1.8
CNN3-206ENST00000487539 HNRNPFP52597 415 aaKnown RBP3.78□□□□□ -1.8
CNN3-206ENST00000487539 UBA52P62987 128 aaKnown RBP3.78□□□□□ -1.8
CNN3-206ENST00000487539 TSTA3Q13630 321 aaPredicted RBP3.78□□□□□ -1.8
CNN3-206ENST00000487539 DPYSL3Q14195 570 aa3.78□□□□□ -1.8
CNN3-206ENST00000487539 NAA25Q14CX7 972 aa3.78□□□□□ -1.8
CNN3-206ENST00000487539 SLC1A5Q15758 541 aa3.78□□□□□ -1.8
CNN3-206ENST00000487539 ZNF791Q3KP31 576 aaPredicted RBP3.78□□□□□ -1.8
CNN3-206ENST00000487539 NCMAPQ5T1S8 102 aa3.78□□□□□ -1.8
CNN3-206ENST00000487539 ZDHHC20Q5W0Z9 365 aa3.78□□□□□ -1.8
CNN3-206ENST00000487539 CCDC70Q6NSX1 233 aa3.78□□□□□ -1.8
CNN3-206ENST00000487539 ZNF449Q6P9G9 518 aa3.78□□□□□ -1.8
CNN3-206ENST00000487539 KLHL24Q6TFL4 600 aa3.78□□□□□ -1.8
CNN3-206ENST00000487539 TMEM64Q6YI46 380 aa3.78□□□□□ -1.8
CNN3-206ENST00000487539 STAC2Q6ZMT1 411 aa3.78□□□□□ -1.8
CNN3-206ENST00000487539 BBS12Q6ZW61 710 aa3.78□□□□□ -1.8
CNN3-206ENST00000487539 TAS2R42Q7RTR8 314 aa3.78□□□□□ -1.8
CNN3-206ENST00000487539 SNX20Q7Z614 316 aa3.78□□□□□ -1.8
CNN3-206ENST00000487539 CTAGE6Q86UF2 777 aa3.78□□□□□ -1.8
CNN3-206ENST00000487539 LRRC49Q8IUZ0 686 aa3.78□□□□□ -1.8
CNN3-206ENST00000487539 PSTKQ8IV42 348 aaKnown RBP3.78□□□□□ -1.8
CNN3-206ENST00000487539 SLC22A15Q8IZD6 547 aa3.78□□□□□ -1.8
CNN3-206ENST00000487539 KRT222Q8N1A0 295 aa3.78□□□□□ -1.8
CNN3-206ENST00000487539 ZNF619Q8N2I2 560 aa3.78□□□□□ -1.8
CNN3-206ENST00000487539 PPFIBP2Q8ND30 876 aa3.78□□□□□ -1.8
CNN3-206ENST00000487539 RFWD2Q8NHY2 731 aa3.78□□□□□ -1.8
CNN3-206ENST00000487539 ZPLD1Q8TCW7 415 aa3.78□□□□□ -1.8
CNN3-206ENST00000487539 DOK4Q8TEW6 326 aa3.78□□□□□ -1.8
CNN3-206ENST00000487539 ATL1Q8WXF7 558 aa3.78□□□□□ -1.8
CNN3-206ENST00000487539 FAF2Q96CS3 445 aa3.78□□□□□ -1.8
CNN3-206ENST00000487539 SLC25A33Q9BSK2 321 aa3.78□□□□□ -1.8
CNN3-206ENST00000487539 GANQ9H2C0 597 aa3.78□□□□□ -1.8
CNN3-206ENST00000487539 RHBGQ9H310 441 aa3.78□□□□□ -1.8
CNN3-206ENST00000487539 TRABDQ9H4I3 376 aa3.78□□□□□ -1.8
CNN3-206ENST00000487539 MRPS30Q9NP92 439 aaKnown RBP3.78□□□□□ -1.8
CNN3-206ENST00000487539 ADAP2Q9NPF8 381 aa3.78□□□□□ -1.8
CNN3-206ENST00000487539 ABCF3Q9NUQ8 709 aa3.78□□□□□ -1.8
CNN3-206ENST00000487539 SMARCAL1Q9NZC9 954 aa3.78□□□□□ -1.8
CNN3-206ENST00000487539 PROCRQ9UNN8 238 aa3.78□□□□□ -1.8
CNN3-206ENST00000487539 GPR52Q9Y2T5 361 aa3.78□□□□□ -1.8
CNN3-206ENST00000487539 RNF115Q9Y4L5 304 aa3.78□□□□□ -1.8
CNN3-206ENST00000487539 PPIAL4AQ9Y536 164 aa3.78□□□□□ -1.8
CNN3-206ENST00000487539 PCDHGB5Q9Y5G0 923 aa3.78□□□□□ -1.8
CNN3-206ENST00000487539 EXPH5Q8NEV8 1989 aa3.78□□□□□ -1.8
CNN3-206ENST00000487539 GOLGA6L4A6NEF3 574 aa3.77□□□□□ -1.81
CNN3-206ENST00000487539 GOLGA6L9A6NEM1 432 aa3.77□□□□□ -1.81
CNN3-206ENST00000487539 FAM90A7PA6NKC0 464 aa3.77□□□□□ -1.81
CNN3-206ENST00000487539 FAM90A22PA8MWA6 464 aa3.77□□□□□ -1.81
CNN3-206ENST00000487539 FAM90A12PA8MX19 464 aa3.77□□□□□ -1.81
CNN3-206ENST00000487539 FAM90A23PA8MXZ1 464 aa3.77□□□□□ -1.81
CNN3-206ENST00000487539 SHISA9B4DS77 424 aa3.77□□□□□ -1.81
CNN3-206ENST00000487539 SLC25A17O43808 307 aa3.77□□□□□ -1.81
CNN3-206ENST00000487539 CEP104O60308 925 aa3.77□□□□□ -1.81
CNN3-206ENST00000487539 GUCY1B2O75343 617 aa3.77□□□□□ -1.81
CNN3-206ENST00000487539 VPS26AO75436 327 aa3.77□□□□□ -1.81
CNN3-206ENST00000487539 GPC4O75487 556 aa3.77□□□□□ -1.81
CNN3-206ENST00000487539 C1orf105O95561 183 aa3.77□□□□□ -1.81
CNN3-206ENST00000487539 GNA14O95837 355 aa3.77□□□□□ -1.81
CNN3-206ENST00000487539 HPNP05981 417 aa3.77□□□□□ -1.81
CNN3-206ENST00000487539 TFPIP10646 304 aa3.77□□□□□ -1.81
CNN3-206ENST00000487539 PCNAP12004 261 aa3.77□□□□□ -1.81
CNN3-206ENST00000487539 MDKP21741 143 aaPredicted RBP3.77□□□□□ -1.81
CNN3-206ENST00000487539 PTPN3P26045 913 aa3.77□□□□□ -1.81
CNN3-206ENST00000487539 CMPK1P30085 196 aa3.77□□□□□ -1.81
CNN3-206ENST00000487539 COILP38432 576 aaPredicted RBP3.77□□□□□ -1.81
CNN3-206ENST00000487539 ZNF140P52738 457 aaPredicted RBP3.77□□□□□ -1.81
CNN3-206ENST00000487539 SLC25A11Q02978 314 aaKnown RBP3.77□□□□□ -1.81
CNN3-206ENST00000487539 BSPH1Q075Z2 132 aa3.77□□□□□ -1.81
CNN3-206ENST00000487539 PPIDQ08752 370 aaKnown RBP3.77□□□□□ -1.81
CNN3-206ENST00000487539 HSPA14Q0VDF9 509 aa3.77□□□□□ -1.81
CNN3-206ENST00000487539 ASPHQ12797 758 aa3.77□□□□□ -1.81
CNN3-206ENST00000487539 NDUFA9Q16795 377 aa3.77□□□□□ -1.81
CNN3-206ENST00000487539 CTU2Q2VPK5 515 aaKnown RBP3.77□□□□□ -1.81
CNN3-206ENST00000487539 HSP90AA4PQ58FG1 418 aa3.77□□□□□ -1.81
CNN3-206ENST00000487539 DNAJC21Q5F1R6 531 aaKnown RBP3.77□□□□□ -1.81
CNN3-206ENST00000487539 NHSL2Q5HYW2 709 aa3.77□□□□□ -1.81
CNN3-206ENST00000487539 CCDC183Q5T5S1 534 aa3.77□□□□□ -1.81
CNN3-206ENST00000487539 SLC22A10Q63ZE4 541 aa3.77□□□□□ -1.81
CNN3-206ENST00000487539 ATG16L1Q676U5 607 aa3.77□□□□□ -1.81
CNN3-206ENST00000487539 ENPP6Q6UWR7 440 aa3.77□□□□□ -1.81
CNN3-206ENST00000487539 KRTAP5-2Q701N4 177 aa3.77□□□□□ -1.81
CNN3-206ENST00000487539 ZNF677Q86XU0 584 aa3.77□□□□□ -1.81
CNN3-206ENST00000487539 DCUN1D3Q8IWE4 304 aa3.77□□□□□ -1.81
CNN3-206ENST00000487539 GPALPP1Q8IXQ4 340 aa3.77□□□□□ -1.81
CNN3-206ENST00000487539 PM20D2Q8IYS1 436 aa3.77□□□□□ -1.81
CNN3-206ENST00000487539 IPMKQ8NFU5 416 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms