RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 RCVRNP35243 200 aa24.19■■□□□ 1.46
HLA-C-208ENST00000487245 KIR2DL3P43628 341 aa24.19■■□□□ 1.46
HLA-C-208ENST00000487245 CAV3P56539 151 aa24.19■■□□□ 1.46
HLA-C-208ENST00000487245 MAPK14Q16539 360 aa24.19■■□□□ 1.46
HLA-C-208ENST00000487245 TMEM91Q6ZNR0 172 aa24.19■■□□□ 1.46
HLA-C-208ENST00000487245 ACBD7Q8N6N7 88 aa24.19■■□□□ 1.46
HLA-C-208ENST00000487245 SIRT6Q8N6T7 355 aa24.19■■□□□ 1.46
HLA-C-208ENST00000487245 TMEM52Q8NDY8 209 aa24.19■■□□□ 1.46
HLA-C-208ENST00000487245 CTHRC1Q96CG8 243 aa24.19■■□□□ 1.46
HLA-C-208ENST00000487245 HS6ST2Q96MM7 605 aa24.19■■□□□ 1.46
HLA-C-208ENST00000487245 HDHD5Q9BXW7 423 aa24.19■■□□□ 1.46
HLA-C-208ENST00000487245 RNF32Q9H0A6 362 aa24.19■■□□□ 1.46
HLA-C-208ENST00000487245 INPP5EQ9NRR6 644 aa24.19■■□□□ 1.46
HLA-C-208ENST00000487245 C5orf42Q9H799 3197 aa24.19■■□□□ 1.46
HLA-C-208ENST00000487245 LINC00854A0A1B0GVQ3 168 aa24.18■■□□□ 1.46
HLA-C-208ENST00000487245 FAM47E-STBD1D6RA91 191 aa24.18■■□□□ 1.46
HLA-C-208ENST00000487245 HPGDSO60760 199 aa24.18■■□□□ 1.46
HLA-C-208ENST00000487245 RGS9O75916 674 aaPredicted RBP24.18■■□□□ 1.46
HLA-C-208ENST00000487245 GUSBP08236 651 aa24.18■■□□□ 1.46
HLA-C-208ENST00000487245 SLC35E2P0CK97 266 aa24.18■■□□□ 1.46
HLA-C-208ENST00000487245 APEX1P27695 318 aaKnown RBP24.18■■□□□ 1.46
HLA-C-208ENST00000487245 ATP6V1E1P36543 226 aa24.18■■□□□ 1.46
HLA-C-208ENST00000487245 MTNR1BP49286 362 aa24.18■■□□□ 1.46
HLA-C-208ENST00000487245 BLKP51451 505 aa24.18■■□□□ 1.46
HLA-C-208ENST00000487245 DAB2P98082 770 aa24.18■■□□□ 1.46
HLA-C-208ENST00000487245 QPRTQ15274 297 aa24.18■■□□□ 1.46
HLA-C-208ENST00000487245 OR1Q1Q15612 314 aa24.18■■□□□ 1.46
HLA-C-208ENST00000487245 MRPL2Q5T653 305 aaKnown RBP24.18■■□□□ 1.46
HLA-C-208ENST00000487245 LNX2Q8N448 690 aa24.18■■□□□ 1.46
HLA-C-208ENST00000487245 DUSP18Q8NEJ0 188 aa24.18■■□□□ 1.46
HLA-C-208ENST00000487245 OR5T3Q8NGG3 340 aa24.18■■□□□ 1.46
HLA-C-208ENST00000487245 OR52L1Q8NGH7 329 aa24.18■■□□□ 1.46
HLA-C-208ENST00000487245 GPR27Q9NS67 375 aa24.18■■□□□ 1.46
HLA-C-208ENST00000487245 SIDT1Q9NXL6 827 aaKnown RBP24.18■■□□□ 1.46
HLA-C-208ENST00000487245 TMEM5Q9Y2B1 443 aa24.18■■□□□ 1.46
HLA-C-208ENST00000487245 SHISA3A0PJX4 238 aa24.17■■□□□ 1.46
HLA-C-208ENST00000487245 SMIM30A4D0T7 59 aa24.17■■□□□ 1.46
HLA-C-208ENST00000487245 CDHR4A6H8M9 788 aa24.17■■□□□ 1.46
HLA-C-208ENST00000487245 RNF13O43567 381 aa24.17■■□□□ 1.46
HLA-C-208ENST00000487245 SLC2A2P11168 524 aaPredicted RBP24.17■■□□□ 1.46
HLA-C-208ENST00000487245 HTR2AP28223 471 aa24.17■■□□□ 1.46
HLA-C-208ENST00000487245 MAP2K3P46734 347 aa24.17■■□□□ 1.46
HLA-C-208ENST00000487245 FXYD6P3P58550 94 aa24.17■■□□□ 1.46
HLA-C-208ENST00000487245 KLBQ86Z14 1044 aa24.17■■□□□ 1.46
HLA-C-208ENST00000487245 FAM174AQ8TBP5 190 aa24.17■■□□□ 1.46
HLA-C-208ENST00000487245 ENKURQ8TC29 256 aa24.17■■□□□ 1.46
HLA-C-208ENST00000487245 FANK1Q8TC84 345 aa24.17■■□□□ 1.46
HLA-C-208ENST00000487245 HOXB13Q92826 284 aaPredicted RBP24.17■■□□□ 1.46
HLA-C-208ENST00000487245 ANKRD9Q96BM1 317 aaPredicted RBP24.17■■□□□ 1.46
HLA-C-208ENST00000487245 CD180Q99467 661 aa24.17■■□□□ 1.46
HLA-C-208ENST00000487245 GDF15Q99988 308 aa24.17■■□□□ 1.46
HLA-C-208ENST00000487245 DDX28Q9NUL7 540 aaKnown RBP24.17■■□□□ 1.46
HLA-C-208ENST00000487245 BABAM2Q9NXR7 383 aa24.17■■□□□ 1.46
HLA-C-208ENST00000487245 GTPBP1O00178 669 aaKnown RBP24.17■■□□□ 1.46
HLA-C-208ENST00000487245 TRIM3O75382 744 aaPredicted RBP24.17■■□□□ 1.46
HLA-C-208ENST00000487245 THEGLP0DJG4 465 aa24.17■■□□□ 1.46
HLA-C-208ENST00000487245 FZD2Q14332 565 aa24.17■■□□□ 1.46
HLA-C-208ENST00000487245 TRIQKQ629K1 86 aa24.17■■□□□ 1.46
HLA-C-208ENST00000487245 MZT2BQ6NZ67 158 aa24.17■■□□□ 1.46
HLA-C-208ENST00000487245 TMPRSS11FQ6ZWK6 438 aa24.17■■□□□ 1.46
HLA-C-208ENST00000487245 CDK20Q8IZL9 346 aa24.17■■□□□ 1.46
HLA-C-208ENST00000487245 SLC7A5P1Q8MH63 180 aa24.17■■□□□ 1.46
HLA-C-208ENST00000487245 Q8N402 240 aa24.17■■□□□ 1.46
HLA-C-208ENST00000487245 TMEM239Q8WW34 195 aa24.17■■□□□ 1.46
HLA-C-208ENST00000487245 UBL7Q96S82 380 aaPredicted RBP24.17■■□□□ 1.46
HLA-C-208ENST00000487245 KCNN2Q9H2S1 579 aa24.17■■□□□ 1.46
HLA-C-208ENST00000487245 RBFOX1Q9NWB1 397 aaKnown RBP24.17■■□□□ 1.46
HLA-C-208ENST00000487245 POMT2Q9UKY4 750 aa24.17■■□□□ 1.46
HLA-C-208ENST00000487245 CENPVL1A0A0U1RR11 272 aa24.16■■□□□ 1.46
HLA-C-208ENST00000487245 SGK494L7N484 410 aa24.16■■□□□ 1.46
HLA-C-208ENST00000487245 TFECO14948 347 aaPredicted RBP24.16■■□□□ 1.46
HLA-C-208ENST00000487245 BRINP1O60477 761 aa24.16■■□□□ 1.46
HLA-C-208ENST00000487245 NKX2-2O95096 273 aa24.16■■□□□ 1.46
HLA-C-208ENST00000487245 RCBTB2O95199 551 aa24.16■■□□□ 1.46
HLA-C-208ENST00000487245 TBXA2RP21731 343 aa24.16■■□□□ 1.46
HLA-C-208ENST00000487245 GABRA3P34903 492 aa24.16■■□□□ 1.46
HLA-C-208ENST00000487245 HHEXQ03014 270 aa24.16■■□□□ 1.46
HLA-C-208ENST00000487245 GARNL3Q5VVW2 1013 aa24.16■■□□□ 1.46
HLA-C-208ENST00000487245 GATAD2AQ86YP4 633 aa24.16■■□□□ 1.46
HLA-C-208ENST00000487245 C19orf18Q8NEA5 215 aa24.16■■□□□ 1.46
HLA-C-208ENST00000487245 TOE1Q96GM8 510 aaKnown RBP24.16■■□□□ 1.46
HLA-C-208ENST00000487245 SENP5Q96HI0 755 aaPredicted RBP24.16■■□□□ 1.46
HLA-C-208ENST00000487245 ZNF559Q9BR84 538 aa24.16■■□□□ 1.46
HLA-C-208ENST00000487245 TMEM43Q9BTV4 400 aa24.16■■□□□ 1.46
HLA-C-208ENST00000487245 MAKP20794 623 aa24.15■■□□□ 1.46
HLA-C-208ENST00000487245 PAICSP22234 425 aaKnown RBP24.15■■□□□ 1.46
HLA-C-208ENST00000487245 PLBD1Q6P4A8 553 aa24.15■■□□□ 1.46
HLA-C-208ENST00000487245 SMARCD3Q6STE5 483 aa24.15■■□□□ 1.46
HLA-C-208ENST00000487245 WDR88Q6ZMY6 472 aa24.15■■□□□ 1.46
HLA-C-208ENST00000487245 OR51G2Q8NGK0 314 aa24.15■■□□□ 1.46
HLA-C-208ENST00000487245 RNF170Q96K19 258 aa24.15■■□□□ 1.46
HLA-C-208ENST00000487245 KCNJ15Q99712 375 aa24.15■■□□□ 1.46
HLA-C-208ENST00000487245 TIMP4Q99727 224 aa24.15■■□□□ 1.46
HLA-C-208ENST00000487245 DPH1Q9BZG8 443 aa24.15■■□□□ 1.46
HLA-C-208ENST00000487245 A0A0B4J293 547 aa24.15■■□□□ 1.46
HLA-C-208ENST00000487245 C12orf71A8MTZ7 269 aa24.15■■□□□ 1.46
HLA-C-208ENST00000487245 C2CD4DB7Z1M9 353 aa24.15■■□□□ 1.46
HLA-C-208ENST00000487245 CT62P0C5K7 136 aa24.15■■□□□ 1.46
HLA-C-208ENST00000487245 FAM157BP0CG42 384 aa24.15■■□□□ 1.46
HLA-C-208ENST00000487245 PRG2P13727 222 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms