RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 ZPLD1Q8TCW7 415 aa13.26□□□□□ -0.29
LIMS3-205ENST00000487150 ASB5Q8WWX0 329 aa13.26□□□□□ -0.29
LIMS3-205ENST00000487150 SLC35B4Q969S0 331 aa13.26□□□□□ -0.29
LIMS3-205ENST00000487150 LRRC58Q96CX6 371 aa13.26□□□□□ -0.29
LIMS3-205ENST00000487150 CCDC120Q96HB5 630 aa13.26□□□□□ -0.29
LIMS3-205ENST00000487150 DMRTA2Q96SC8 542 aa13.26□□□□□ -0.29
LIMS3-205ENST00000487150 ZNF607Q96SK3 696 aa13.26□□□□□ -0.29
LIMS3-205ENST00000487150 EVA1AQ9H8M9 152 aa13.26□□□□□ -0.29
LIMS3-205ENST00000487150 SLAMF8Q9P0V8 285 aa13.26□□□□□ -0.29
LIMS3-205ENST00000487150 ARMCX1Q9P291 453 aa13.26□□□□□ -0.29
LIMS3-205ENST00000487150 VDAC3Q9Y277 283 aa13.26□□□□□ -0.29
LIMS3-205ENST00000487150 PRRC2CQ9Y520 2896 aaKnown RBP13.26□□□□□ -0.29
LIMS3-205ENST00000487150 HRH3Q9Y5N1 445 aa13.26□□□□□ -0.29
LIMS3-205ENST00000487150 SVILO95425 2214 aa13.25□□□□□ -0.29
LIMS3-205ENST00000487150 OR2M5A3KFT3 312 aa13.25□□□□□ -0.29
LIMS3-205ENST00000487150 PRAMEF27A3QJZ7 478 aa13.25□□□□□ -0.29
LIMS3-205ENST00000487150 WIPF3A6NGB9 483 aa13.25□□□□□ -0.29
LIMS3-205ENST00000487150 CD8B2A6NJW9 211 aa13.25□□□□□ -0.29
LIMS3-205ENST00000487150 GMFGO60234 142 aa13.25□□□□□ -0.29
LIMS3-205ENST00000487150 SERPINB7O75635 380 aa13.25□□□□□ -0.29
LIMS3-205ENST00000487150 CYP7B1O75881 506 aa13.25□□□□□ -0.29
LIMS3-205ENST00000487150 FAM107AO95990 144 aa13.25□□□□□ -0.29
LIMS3-205ENST00000487150 ZNF708P17019 499 aa13.25□□□□□ -0.29
LIMS3-205ENST00000487150 FKBP2P26885 142 aaKnown RBP13.25□□□□□ -0.29
LIMS3-205ENST00000487150 PGM1P36871 562 aa13.25□□□□□ -0.29
LIMS3-205ENST00000487150 LHX2P50458 406 aa13.25□□□□□ -0.29
LIMS3-205ENST00000487150 SCARB2Q14108 478 aa13.25□□□□□ -0.29
LIMS3-205ENST00000487150 TMEM44Q2T9K0 475 aa13.25□□□□□ -0.29
LIMS3-205ENST00000487150 ACSF3Q4G176 576 aaPredicted RBP13.25□□□□□ -0.29
LIMS3-205ENST00000487150 EMC4Q5J8M3 183 aa13.25□□□□□ -0.29
LIMS3-205ENST00000487150 PDSS1Q5T2R2 415 aa13.25□□□□□ -0.29
LIMS3-205ENST00000487150 ERICH5Q6P6B1 374 aa13.25□□□□□ -0.29
LIMS3-205ENST00000487150 ARSKQ6UWY0 536 aa13.25□□□□□ -0.29
LIMS3-205ENST00000487150 ANKS4BQ8N8V4 417 aa13.25□□□□□ -0.29
LIMS3-205ENST00000487150 OR52P1PQ8NH57 321 aa13.25□□□□□ -0.29
LIMS3-205ENST00000487150 WDYHV1Q96HA8 205 aa13.25□□□□□ -0.29
LIMS3-205ENST00000487150 ZFP3Q96NJ6 502 aa13.25□□□□□ -0.29
LIMS3-205ENST00000487150 LRRC37BQ96QE4 947 aa13.25□□□□□ -0.29
LIMS3-205ENST00000487150 RUBCNLQ9H714 662 aa13.25□□□□□ -0.29
LIMS3-205ENST00000487150 CALHM2Q9HA72 323 aa13.25□□□□□ -0.29
LIMS3-205ENST00000487150 ALKBH4Q9NXW9 302 aa13.25□□□□□ -0.29
LIMS3-205ENST00000487150 ZNF443Q9Y2A4 671 aaPredicted RBP13.25□□□□□ -0.29
LIMS3-205ENST00000487150 SPIN1Q9Y657 262 aaPredicted RBP13.25□□□□□ -0.29
LIMS3-205ENST00000487150 RELNP78509 3460 aa13.25□□□□□ -0.29
LIMS3-205ENST00000487150 LOC100653049A0A140TA62 436 aa13.24□□□□□ -0.29
LIMS3-205ENST00000487150 H3BML4 177 aa13.24□□□□□ -0.29
LIMS3-205ENST00000487150 ETV2O00321 342 aaPredicted RBP13.24□□□□□ -0.29
LIMS3-205ENST00000487150 FAAHO00519 579 aa13.24□□□□□ -0.29
LIMS3-205ENST00000487150 FBP2O00757 339 aa13.24□□□□□ -0.29
LIMS3-205ENST00000487150 DNAJA2O60884 412 aa13.24□□□□□ -0.29
LIMS3-205ENST00000487150 KRT34O76011 436 aa13.24□□□□□ -0.29
LIMS3-205ENST00000487150 PGM3O95394 542 aa13.24□□□□□ -0.29
LIMS3-205ENST00000487150 LINGO3P0C6S8 592 aa13.24□□□□□ -0.29
LIMS3-205ENST00000487150 FCGR2AP12318 317 aa13.24□□□□□ -0.29
LIMS3-205ENST00000487150 CHRNB4P30926 498 aa13.24□□□□□ -0.29
LIMS3-205ENST00000487150 PRKAR1BP31321 381 aa13.24□□□□□ -0.29
LIMS3-205ENST00000487150 HTR3AP46098 478 aa13.24□□□□□ -0.29
LIMS3-205ENST00000487150 MTPNP58546 118 aa13.24□□□□□ -0.29
LIMS3-205ENST00000487150 B3GALT5-AS1P59052 145 aa13.24□□□□□ -0.29
LIMS3-205ENST00000487150 RAC1P63000 192 aa13.24□□□□□ -0.29
LIMS3-205ENST00000487150 EEF1A1P68104 462 aaKnown RBP13.24□□□□□ -0.29
LIMS3-205ENST00000487150 SELENBP1Q13228 472 aa13.24□□□□□ -0.29
LIMS3-205ENST00000487150 MAPK14Q16539 360 aa13.24□□□□□ -0.29
LIMS3-205ENST00000487150 SLC25A53Q5H9E4 307 aa13.24□□□□□ -0.29
LIMS3-205ENST00000487150 MRPL2Q5T653 305 aaKnown RBP13.24□□□□□ -0.29
LIMS3-205ENST00000487150 RIPPLY2Q5TAB7 128 aa13.24□□□□□ -0.29
LIMS3-205ENST00000487150 EEF1A1P5Q5VTE0 462 aa13.24□□□□□ -0.29
LIMS3-205ENST00000487150 NSUN5P2Q63ZY6 315 aa13.24□□□□□ -0.29
LIMS3-205ENST00000487150 C3orf33Q6P1S2 294 aa13.24□□□□□ -0.29
LIMS3-205ENST00000487150 CBLN3Q6UW01 205 aa13.24□□□□□ -0.29
LIMS3-205ENST00000487150 ZNF550Q7Z398 422 aa13.24□□□□□ -0.29
LIMS3-205ENST00000487150 NET1Q7Z628 596 aaPredicted RBP13.24□□□□□ -0.29
LIMS3-205ENST00000487150 PIGWQ7Z7B1 504 aa13.24□□□□□ -0.29
LIMS3-205ENST00000487150 GRAMD2AQ8IUY3 354 aa13.24□□□□□ -0.29
LIMS3-205ENST00000487150 ZNF563Q8TA94 476 aa13.24□□□□□ -0.29
LIMS3-205ENST00000487150 SLC25A43Q8WUT9 341 aaPredicted RBP13.24□□□□□ -0.29
LIMS3-205ENST00000487150 RNF145Q96MT1 663 aa13.24□□□□□ -0.29
LIMS3-205ENST00000487150 TM9SF2Q99805 663 aa13.24□□□□□ -0.29
LIMS3-205ENST00000487150 ECSITQ9BQ95 431 aa13.24□□□□□ -0.29
LIMS3-205ENST00000487150 TTYH2Q9BSA4 534 aa13.24□□□□□ -0.29
LIMS3-205ENST00000487150 KAT8Q9H7Z6 458 aaKnown RBP13.24□□□□□ -0.29
LIMS3-205ENST00000487150 EFCAB1Q9HAE3 211 aa13.24□□□□□ -0.29
LIMS3-205ENST00000487150 SERINC1Q9NRX5 453 aa13.24□□□□□ -0.29
LIMS3-205ENST00000487150 FAM53CQ9NYF3 392 aa13.24□□□□□ -0.29
LIMS3-205ENST00000487150 TNFRSF10DQ9UBN6 386 aa13.24□□□□□ -0.29
LIMS3-205ENST00000487150 KCNE5Q9UJ90 142 aa13.24□□□□□ -0.29
LIMS3-205ENST00000487150 SLC13A4Q9UKG4 626 aa13.24□□□□□ -0.29
LIMS3-205ENST00000487150 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.23□□□□□ -0.29
LIMS3-205ENST00000487150 CENPVL1A0A0U1RR11 272 aa13.23□□□□□ -0.29
LIMS3-205ENST00000487150 CDHR4A6H8M9 788 aa13.23□□□□□ -0.29
LIMS3-205ENST00000487150 CFAP73A6NFT4 308 aa13.23□□□□□ -0.29
LIMS3-205ENST00000487150 HSPB2A8KAH6 182 aa13.23□□□□□ -0.29
LIMS3-205ENST00000487150 C17orf51A8MQB3 221 aa13.23□□□□□ -0.29
LIMS3-205ENST00000487150 B4DXG7 233 aa13.23□□□□□ -0.29
LIMS3-205ENST00000487150 ZG16O60844 167 aa13.23□□□□□ -0.29
LIMS3-205ENST00000487150 SHOX2O60902 331 aaPredicted RBP13.23□□□□□ -0.29
LIMS3-205ENST00000487150 EPPINO95925 133 aa13.23□□□□□ -0.29
LIMS3-205ENST00000487150 C1QCP02747 245 aa13.23□□□□□ -0.29
LIMS3-205ENST00000487150 PABPC4LP0CB38 370 aaKnown RBP13.23□□□□□ -0.29
LIMS3-205ENST00000487150 COX4I1P13073 169 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms