RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 CNOT3O75175 753 aaKnown RBP6.48□□□□□ -1.37
SF3A3-206ENST00000487062 CSO75390 466 aaKnown RBP6.48□□□□□ -1.37
SF3A3-206ENST00000487062 ZFAND5O76080 213 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 STK17BO94768 372 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 MT-CO3P00414 261 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 RPLP1P05386 114 aaKnown RBP6.48□□□□□ -1.37
SF3A3-206ENST00000487062 NGFRP08138 427 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 LINGO3P0C6S8 592 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 UBL4AP11441 157 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 NAGAP17050 411 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 FUT4P22083 530 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 CHMP24386 653 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 CRHBPP24387 322 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 POU1F1P28069 291 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 HTR2AP28223 471 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 EPHA2P29317 976 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 FOLR3P41439 243 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 STAT5AP42229 794 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 RBM34P42696 430 aaKnown RBP6.48□□□□□ -1.37
SF3A3-206ENST00000487062 SLC6A8P48029 635 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 GSSP48637 474 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 IDH2P48735 452 aaKnown RBP6.48□□□□□ -1.37
SF3A3-206ENST00000487062 TMED10P49755 219 aaKnown RBP6.48□□□□□ -1.37
SF3A3-206ENST00000487062 SLC26A5P58743 744 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 CLN3Q13286 438 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 EFR3AQ14156 821 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 NCF4Q15080 339 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 PTGES3Q15185 160 aaKnown RBP6.48□□□□□ -1.37
SF3A3-206ENST00000487062 CTU2Q2VPK5 515 aaKnown RBP6.48□□□□□ -1.37
SF3A3-206ENST00000487062 BROXQ5VW32 411 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 LCN10Q6JVE6 187 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 FAM199XQ6PEV8 388 aaPredicted RBP6.48□□□□□ -1.37
SF3A3-206ENST00000487062 ULK3Q6PHR2 472 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 FAM198BQ6UWH4 519 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 C6orf15Q6UXA7 325 aaPredicted RBP6.48□□□□□ -1.37
SF3A3-206ENST00000487062 CASP12Q6UXS9 341 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 RASSF6Q6ZTQ3 369 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 PRICKLE2Q7Z3G6 844 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 ZER1Q7Z7L7 766 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 NKAIN4Q8IVV8 208 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 ENTHD1Q8IYW4 607 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 LSMEM1Q8N8F7 131 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 ZNF441Q8N8Z8 693 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 ZSCAN1Q8NBB4 408 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 GALNT6Q8NCL4 622 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 BPIFB6Q8NFQ5 453 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 OR4C3Q8NH37 302 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 WDR36Q8NI36 951 aaKnown RBP6.48□□□□□ -1.37
SF3A3-206ENST00000487062 TEX47Q8TBZ9 253 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 PHOSPHO1Q8TCT1 267 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 FBLIM1Q8WUP2 373 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 DNAJA4Q8WW22 397 aaPredicted RBP6.48□□□□□ -1.37
SF3A3-206ENST00000487062 TMEM239Q8WW34 195 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 OMA1Q96E52 524 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 CCNL2Q96S94 520 aaPredicted RBP6.48□□□□□ -1.37
SF3A3-206ENST00000487062 ADOQ96SZ5 270 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 TBL1XR1Q9BZK7 514 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 NRSN2Q9GZP1 204 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 CCNB1IP1Q9NPC3 277 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 EXOSC3Q9NQT5 275 aaKnown RBP6.48□□□□□ -1.37
SF3A3-206ENST00000487062 REV1Q9UBZ9 1251 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 PISDQ9UG56 409 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 PADI1Q9ULC6 663 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 NTNG1Q9Y2I2 539 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 MED31Q9Y3C7 131 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 PTRH2Q9Y3E5 179 aaKnown RBP6.48□□□□□ -1.37
SF3A3-206ENST00000487062 PCDHGA6Q9Y5G7 932 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 SNX5Q9Y5X3 404 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 NPFFR2Q9Y5X5 522 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 B3GALT1Q9Y5Z6 326 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 KIF26BQ2KJY2 2108 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 ZNF318Q5VUA4 2279 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 LOC102723996A0A087X1L8 192 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 A0A0B4J2E0 115 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 TRBV11-1A0A0K0K1C0 115 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 A0A1B0GWA3 101 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 A0A1B0GX12 115 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 CDC14CA4D256 554 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 HTR3EA5X5Y0 456 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 OR6C70A6NIJ9 312 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 PLD2O14939 933 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 SIAH2O43255 324 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 GDF9O60383 454 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 EIF4E2O60573 245 aaKnown RBP6.47□□□□□ -1.37
SF3A3-206ENST00000487062 FAM20BO75063 409 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 ICOSLGO75144 302 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 PPM1BO75688 479 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 RAB40ALP0C0E4 278 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 ITIH1P19827 911 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 FPR3P25089 353 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 CALRP27797 417 aaKnown RBP6.47□□□□□ -1.37
SF3A3-206ENST00000487062 ABCD3P28288 659 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 FMO3P31513 532 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 TTKP33981 857 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 ETV5P41161 510 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 ACAA2P42765 397 aaKnown RBP6.47□□□□□ -1.37
SF3A3-206ENST00000487062 OMPP47874 163 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 RNF144AP50876 292 aaPredicted RBP6.47□□□□□ -1.37
SF3A3-206ENST00000487062 SMSP52788 366 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 CDH15P55291 814 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms