RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 RGS8P57771 180 aaPredicted RBP8.72□□□□□ -1.01
MCF2L-227ENST00000486806 COL28A1Q2UY09 1125 aa8.72□□□□□ -1.01
MCF2L-227ENST00000486806 FAM98BQ52LJ0 330 aaKnown RBP8.72□□□□□ -1.01
MCF2L-227ENST00000486806 TIGD3Q6B0B8 471 aa8.72□□□□□ -1.01
MCF2L-227ENST00000486806 FKBP9P1Q75LS8 142 aa8.72□□□□□ -1.01
MCF2L-227ENST00000486806 ZNF550Q7Z398 422 aa8.72□□□□□ -1.01
MCF2L-227ENST00000486806 GALNTL5Q7Z4T8 443 aa8.72□□□□□ -1.01
MCF2L-227ENST00000486806 PACS2Q86VP3 889 aa8.72□□□□□ -1.01
MCF2L-227ENST00000486806 TSPYL5Q86VY4 417 aaPredicted RBP8.72□□□□□ -1.01
MCF2L-227ENST00000486806 PLCZ1Q86YW0 608 aa8.72□□□□□ -1.01
MCF2L-227ENST00000486806 SULF2Q8IWU5 870 aa8.72□□□□□ -1.01
MCF2L-227ENST00000486806 ZADH2Q8N4Q0 377 aa8.72□□□□□ -1.01
MCF2L-227ENST00000486806 ZFP62Q8NB50 900 aaPredicted RBP8.72□□□□□ -1.01
MCF2L-227ENST00000486806 TMEM178AQ8NBL3 297 aa8.72□□□□□ -1.01
MCF2L-227ENST00000486806 OR2M3Q8NG83 312 aa8.72□□□□□ -1.01
MCF2L-227ENST00000486806 OR5W2Q8NH69 310 aa8.72□□□□□ -1.01
MCF2L-227ENST00000486806 B4GALNT2Q8NHY0 566 aa8.72□□□□□ -1.01
MCF2L-227ENST00000486806 VANGL1Q8TAA9 524 aaPredicted RBP8.72□□□□□ -1.01
MCF2L-227ENST00000486806 C9orf43Q8TAL5 461 aaPredicted RBP8.72□□□□□ -1.01
MCF2L-227ENST00000486806 DUSP19Q8WTR2 217 aa8.72□□□□□ -1.01
MCF2L-227ENST00000486806 ZNF524Q96C55 264 aa8.72□□□□□ -1.01
MCF2L-227ENST00000486806 SH3YL1Q96HL8 342 aaPredicted RBP8.72□□□□□ -1.01
MCF2L-227ENST00000486806 RSRC1Q96IZ7 334 aaKnown RBP8.72□□□□□ -1.01
MCF2L-227ENST00000486806 SEPHS2Q99611 448 aa8.72□□□□□ -1.01
MCF2L-227ENST00000486806 UGT2B28Q9BY64 529 aa8.72□□□□□ -1.01
MCF2L-227ENST00000486806 AMBRA1Q9C0C7 1298 aa8.72□□□□□ -1.01
MCF2L-227ENST00000486806 UBQLN3Q9H347 655 aa8.72□□□□□ -1.01
MCF2L-227ENST00000486806 ZNF703Q9H7S9 590 aaPredicted RBP8.72□□□□□ -1.01
MCF2L-227ENST00000486806 IL1RAPQ9NPH3 570 aa8.72□□□□□ -1.01
MCF2L-227ENST00000486806 KLHL1Q9NR64 748 aa8.72□□□□□ -1.01
MCF2L-227ENST00000486806 SDHAF3Q9NRP4 125 aa8.72□□□□□ -1.01
MCF2L-227ENST00000486806 CCM2LQ9NUG4 571 aaPredicted RBP8.72□□□□□ -1.01
MCF2L-227ENST00000486806 TUBA8Q9NY65 449 aaPredicted RBP8.72□□□□□ -1.01
MCF2L-227ENST00000486806 NDUFAF4Q9P032 175 aa8.72□□□□□ -1.01
MCF2L-227ENST00000486806 FBXL2Q9UKC9 423 aa8.72□□□□□ -1.01
MCF2L-227ENST00000486806 SLC13A4Q9UKG4 626 aa8.72□□□□□ -1.01
MCF2L-227ENST00000486806 ACAD8Q9UKU7 415 aa8.72□□□□□ -1.01
MCF2L-227ENST00000486806 C15orf41Q9Y2V0 281 aa8.72□□□□□ -1.01
MCF2L-227ENST00000486806 H3BNX3 289 aa8.71□□□□□ -1.02
MCF2L-227ENST00000486806 GTPBP1O00178 669 aaKnown RBP8.71□□□□□ -1.02
MCF2L-227ENST00000486806 GNB5O14775 395 aa8.71□□□□□ -1.02
MCF2L-227ENST00000486806 DPM1O60762 260 aa8.71□□□□□ -1.02
MCF2L-227ENST00000486806 FKBP6O75344 327 aa8.71□□□□□ -1.02
MCF2L-227ENST00000486806 CYP7B1O75881 506 aa8.71□□□□□ -1.02
MCF2L-227ENST00000486806 GLSO94925 669 aaPredicted RBP8.71□□□□□ -1.02
MCF2L-227ENST00000486806 PRSS23O95084 383 aa8.71□□□□□ -1.02
MCF2L-227ENST00000486806 FABP3P05413 133 aa8.71□□□□□ -1.02
MCF2L-227ENST00000486806 SLC7A1P30825 629 aa8.71□□□□□ -1.02
MCF2L-227ENST00000486806 SLC6A8P48029 635 aa8.71□□□□□ -1.02
MCF2L-227ENST00000486806 MASP1P48740 699 aa8.71□□□□□ -1.02
MCF2L-227ENST00000486806 MEOX1P50221 254 aa8.71□□□□□ -1.02
MCF2L-227ENST00000486806 ELF3P78545 371 aaPredicted RBP8.71□□□□□ -1.02
MCF2L-227ENST00000486806 HOXC5Q00444 222 aa8.71□□□□□ -1.02
MCF2L-227ENST00000486806 CBFBQ13951 182 aa8.71□□□□□ -1.02
MCF2L-227ENST00000486806 GANABQ14697 944 aaKnown RBP8.71□□□□□ -1.02
MCF2L-227ENST00000486806 ZNF169Q14929 603 aaPredicted RBP8.71□□□□□ -1.02
MCF2L-227ENST00000486806 ST3GAL2Q16842 350 aa8.71□□□□□ -1.02
MCF2L-227ENST00000486806 HYAL4Q2M3T9 481 aa8.71□□□□□ -1.02
MCF2L-227ENST00000486806 OR5M10Q6IEU7 315 aa8.71□□□□□ -1.02
MCF2L-227ENST00000486806 C19orf48Q6RUI8 117 aa8.71□□□□□ -1.02
MCF2L-227ENST00000486806 ASB18Q6ZVZ8 466 aa8.71□□□□□ -1.02
MCF2L-227ENST00000486806 PIWIL3Q7Z3Z3 882 aaKnown RBP8.71□□□□□ -1.02
MCF2L-227ENST00000486806 ZNF605Q86T29 641 aa8.71□□□□□ -1.02
MCF2L-227ENST00000486806 RANBP3LQ86VV4 465 aaPredicted RBP8.71□□□□□ -1.02
MCF2L-227ENST00000486806 TMCO5AQ8N6Q1 288 aa8.71□□□□□ -1.02
MCF2L-227ENST00000486806 LSMEM1Q8N8F7 131 aa8.71□□□□□ -1.02
MCF2L-227ENST00000486806 EXD3Q8N9H8 876 aa8.71□□□□□ -1.02
MCF2L-227ENST00000486806 OR1J4Q8NGS1 313 aa8.71□□□□□ -1.02
MCF2L-227ENST00000486806 GPR119Q8TDV5 335 aa8.71□□□□□ -1.02
MCF2L-227ENST00000486806 PYDC1Q8WXC3 89 aa8.71□□□□□ -1.02
MCF2L-227ENST00000486806 C1GALT1C1Q96EU7 318 aa8.71□□□□□ -1.02
MCF2L-227ENST00000486806 DHRS1Q96LJ7 313 aa8.71□□□□□ -1.02
MCF2L-227ENST00000486806 PRRC1Q96M27 445 aa8.71□□□□□ -1.02
MCF2L-227ENST00000486806 ZNF300Q96RE9 604 aaPredicted RBP8.71□□□□□ -1.02
MCF2L-227ENST00000486806 CHID1Q9BWS9 393 aa8.71□□□□□ -1.02
MCF2L-227ENST00000486806 TTTY12Q9BZ98 90 aa8.71□□□□□ -1.02
MCF2L-227ENST00000486806 POLR2J2Q9GZM3 115 aaKnown RBP8.71□□□□□ -1.02
MCF2L-227ENST00000486806 POLR2J3Q9H1A7 115 aaKnown RBP8.71□□□□□ -1.02
MCF2L-227ENST00000486806 ZFP64Q9NPA5 681 aa8.71□□□□□ -1.02
MCF2L-227ENST00000486806 ARMC1Q9NVT9 282 aa8.71□□□□□ -1.02
MCF2L-227ENST00000486806 MED11Q9P086 117 aa8.71□□□□□ -1.02
MCF2L-227ENST00000486806 PRDM4Q9UKN5 801 aa8.71□□□□□ -1.02
MCF2L-227ENST00000486806 BOKQ9UMX3 212 aaPredicted RBP8.71□□□□□ -1.02
MCF2L-227ENST00000486806 A4GNTQ9UNA3 340 aa8.71□□□□□ -1.02
MCF2L-227ENST00000486806 LHX6Q9UPM6 363 aa8.71□□□□□ -1.02
MCF2L-227ENST00000486806 AURKCQ9UQB9 309 aa8.71□□□□□ -1.02
MCF2L-227ENST00000486806 ENPP4Q9Y6X5 453 aa8.71□□□□□ -1.02
MCF2L-227ENST00000486806 ACACBO00763 2458 aa8.7□□□□□ -1.02
MCF2L-227ENST00000486806 A0A0B4J2E0 115 aa8.7□□□□□ -1.02
MCF2L-227ENST00000486806 A0A1B0GX12 115 aa8.7□□□□□ -1.02
MCF2L-227ENST00000486806 KLRC4-KLRK1H3BQV0 150 aa8.7□□□□□ -1.02
MCF2L-227ENST00000486806 J3KTA2 159 aa8.7□□□□□ -1.02
MCF2L-227ENST00000486806 hCG_2039718K7EN88 272 aa8.7□□□□□ -1.02
MCF2L-227ENST00000486806 ERVH48-1M5A8F1 160 aa8.7□□□□□ -1.02
MCF2L-227ENST00000486806 FFAR1O14842 300 aa8.7□□□□□ -1.02
MCF2L-227ENST00000486806 NTN1O95631 604 aa8.7□□□□□ -1.02
MCF2L-227ENST00000486806 MT-ND1P03886 318 aa8.7□□□□□ -1.02
MCF2L-227ENST00000486806 THY1P04216 161 aa8.7□□□□□ -1.02
MCF2L-227ENST00000486806 LINGO3P0C6S8 592 aa8.7□□□□□ -1.02
MCF2L-227ENST00000486806 RFPL3SP0C7P2 107 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms