RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 AQP9O43315 295 aa12.31□□□□□ -0.44
HMGN1-216ENST00000486741 NOS1APO75052 506 aaPredicted RBP12.31□□□□□ -0.44
HMGN1-216ENST00000486741 F13BP05160 661 aa12.31□□□□□ -0.44
HMGN1-216ENST00000486741 CD40LGP29965 261 aa12.31□□□□□ -0.44
HMGN1-216ENST00000486741 IDUAP35475 653 aa12.31□□□□□ -0.44
HMGN1-216ENST00000486741 DNASE1L1P49184 302 aa12.31□□□□□ -0.44
HMGN1-216ENST00000486741 GPR143P51810 404 aa12.31□□□□□ -0.44
HMGN1-216ENST00000486741 TCTE1Q5JU00 501 aa12.31□□□□□ -0.44
HMGN1-216ENST00000486741 TMEM184AQ6ZMB5 413 aa12.31□□□□□ -0.44
HMGN1-216ENST00000486741 GPR32P1Q8NGA4 272 aa12.31□□□□□ -0.44
HMGN1-216ENST00000486741 PFN4Q8NHR9 129 aa12.31□□□□□ -0.44
HMGN1-216ENST00000486741 SP7Q8TDD2 431 aaPredicted RBP12.31□□□□□ -0.44
HMGN1-216ENST00000486741 SMAP2Q8WU79 429 aaPredicted RBP12.31□□□□□ -0.44
HMGN1-216ENST00000486741 SDF2Q99470 211 aa12.31□□□□□ -0.44
HMGN1-216ENST00000486741 NT5DC2Q9H857 520 aa12.31□□□□□ -0.44
HMGN1-216ENST00000486741 ENAMQ9NRM1 1142 aa12.31□□□□□ -0.44
HMGN1-216ENST00000486741 SIDT1Q9NXL6 827 aaKnown RBP12.31□□□□□ -0.44
HMGN1-216ENST00000486741 POLR1CO15160 346 aaPredicted RBP12.31□□□□□ -0.44
HMGN1-216ENST00000486741 TNFSF8P32971 234 aa12.31□□□□□ -0.44
HMGN1-216ENST00000486741 KIAA1024LP59773 190 aa12.31□□□□□ -0.44
HMGN1-216ENST00000486741 XAF1Q6GPH4 301 aa12.31□□□□□ -0.44
HMGN1-216ENST00000486741 ARL14Q8N4G2 192 aa12.31□□□□□ -0.44
HMGN1-216ENST00000486741 BMFQ96LC9 184 aa12.31□□□□□ -0.44
HMGN1-216ENST00000486741 BTBD2Q9BX70 525 aa12.31□□□□□ -0.44
HMGN1-216ENST00000486741 RBM38Q9H0Z9 239 aaKnown RBP12.31□□□□□ -0.44
HMGN1-216ENST00000486741 ING3Q9NXR8 418 aa12.31□□□□□ -0.44
HMGN1-216ENST00000486741 MRPL15Q9P015 296 aaKnown RBP12.31□□□□□ -0.44
HMGN1-216ENST00000486741 VDAC3Q9Y277 283 aa12.31□□□□□ -0.44
HMGN1-216ENST00000486741 FKBP7Q9Y680 259 aa12.31□□□□□ -0.44
HMGN1-216ENST00000486741 KRT33AO76009 404 aa12.31□□□□□ -0.44
HMGN1-216ENST00000486741 ARTNQ5T4W7 220 aa12.31□□□□□ -0.44
HMGN1-216ENST00000486741 OR5K3A6NET4 321 aa12.31□□□□□ -0.44
HMGN1-216ENST00000486741 ZNF670-ZNF695F2Z2N8 137 aa12.31□□□□□ -0.44
HMGN1-216ENST00000486741 NDUFB2O95178 105 aa12.31□□□□□ -0.44
HMGN1-216ENST00000486741 NTN1O95631 604 aa12.31□□□□□ -0.44
HMGN1-216ENST00000486741 DCNP07585 359 aaKnown RBP12.31□□□□□ -0.44
HMGN1-216ENST00000486741 GSTT2P0CG29 244 aa12.31□□□□□ -0.44
HMGN1-216ENST00000486741 GSTT2BP0CG30 244 aa12.31□□□□□ -0.44
HMGN1-216ENST00000486741 FOSL2P15408 326 aa12.31□□□□□ -0.44
HMGN1-216ENST00000486741 LSM11P83369 360 aaKnown RBP eCLIP12.31□□□□□ -0.44
HMGN1-216ENST00000486741 FAM69BQ5VUD6 431 aa12.31□□□□□ -0.44
HMGN1-216ENST00000486741 FBXO42Q6P3S6 717 aa12.31□□□□□ -0.44
HMGN1-216ENST00000486741 IL20RBQ6UXL0 311 aa12.31□□□□□ -0.44
HMGN1-216ENST00000486741 ZNF836Q6ZNA1 936 aa12.31□□□□□ -0.44
HMGN1-216ENST00000486741 KRT77Q7Z794 578 aa12.31□□□□□ -0.44
HMGN1-216ENST00000486741 PARP16Q8N5Y8 322 aa12.31□□□□□ -0.44
HMGN1-216ENST00000486741 TMEM156Q8N614 296 aa12.31□□□□□ -0.44
HMGN1-216ENST00000486741 FAM83FQ8NEG4 500 aaPredicted RBP12.31□□□□□ -0.44
HMGN1-216ENST00000486741 OR6C4Q8NGE1 309 aa12.31□□□□□ -0.44
HMGN1-216ENST00000486741 CKLFQ9UBR5 152 aa12.31□□□□□ -0.44
HMGN1-216ENST00000486741 MRPS2Q9Y399 296 aaKnown RBP12.31□□□□□ -0.44
HMGN1-216ENST00000486741 VWA8A3KMH1 1905 aa12.3□□□□□ -0.44
HMGN1-216ENST00000486741 A0A0A6YYD5 115 aa12.3□□□□□ -0.44
HMGN1-216ENST00000486741 P2RX6O15547 441 aa12.3□□□□□ -0.44
HMGN1-216ENST00000486741 EEF1E1O43324 174 aaKnown RBP12.3□□□□□ -0.44
HMGN1-216ENST00000486741 ARL6IP5O75915 188 aa12.3□□□□□ -0.44
HMGN1-216ENST00000486741 CSN2P05814 226 aa12.3□□□□□ -0.44
HMGN1-216ENST00000486741 PRKCAP17252 672 aa12.3□□□□□ -0.44
HMGN1-216ENST00000486741 TEAD1P28347 426 aa12.3□□□□□ -0.44
HMGN1-216ENST00000486741 GFERP55789 205 aa12.3□□□□□ -0.44
HMGN1-216ENST00000486741 RPS25P62851 125 aaKnown RBP12.3□□□□□ -0.44
HMGN1-216ENST00000486741 SLX4IPQ5VYV7 408 aa12.3□□□□□ -0.44
HMGN1-216ENST00000486741 GPER1Q99527 375 aa12.3□□□□□ -0.44
HMGN1-216ENST00000486741 S100A13Q99584 98 aa12.3□□□□□ -0.44
HMGN1-216ENST00000486741 CHIAQ9BZP6 476 aa12.3□□□□□ -0.44
HMGN1-216ENST00000486741 FTSJ1Q9UET6 329 aa12.3□□□□□ -0.44
HMGN1-216ENST00000486741 CBLCQ9ULV8 474 aa12.3□□□□□ -0.44
HMGN1-216ENST00000486741 A0A1B0GWA3 101 aa12.3□□□□□ -0.44
HMGN1-216ENST00000486741 EPOPA6NHQ4 379 aa12.3□□□□□ -0.44
HMGN1-216ENST00000486741 TSPAN4O14817 238 aa12.3□□□□□ -0.44
HMGN1-216ENST00000486741 FLRT2O43155 660 aa12.3□□□□□ -0.44
HMGN1-216ENST00000486741 CSO75390 466 aaKnown RBP12.3□□□□□ -0.44
HMGN1-216ENST00000486741 FUCA1P04066 466 aa12.3□□□□□ -0.44
HMGN1-216ENST00000486741 HTR1AP08908 422 aa12.3□□□□□ -0.44
HMGN1-216ENST00000486741 TACSTD2P09758 323 aa12.3□□□□□ -0.44
HMGN1-216ENST00000486741 PEPDP12955 493 aa12.3□□□□□ -0.44
HMGN1-216ENST00000486741 CXCL12P48061 93 aa12.3□□□□□ -0.44
HMGN1-216ENST00000486741 CD97P48960 835 aa12.3□□□□□ -0.44
HMGN1-216ENST00000486741 TGM4P49221 684 aa12.3□□□□□ -0.44
HMGN1-216ENST00000486741 OR1D5P58170 312 aa12.3□□□□□ -0.44
HMGN1-216ENST00000486741 SYT14P1Q58G82 188 aa12.3□□□□□ -0.44
HMGN1-216ENST00000486741 KLHL24Q6TFL4 600 aa12.3□□□□□ -0.44
HMGN1-216ENST00000486741 MR1Q95460 341 aa12.3□□□□□ -0.44
HMGN1-216ENST00000486741 MED28Q9H204 178 aa12.3□□□□□ -0.44
HMGN1-216ENST00000486741 H3BML4 177 aa12.3□□□□□ -0.44
HMGN1-216ENST00000486741 H7C1C5 153 aa12.3□□□□□ -0.44
HMGN1-216ENST00000486741 SERPINA3P01011 423 aa12.3□□□□□ -0.44
HMGN1-216ENST00000486741 PTPN6P29350 595 aa12.3□□□□□ -0.44
HMGN1-216ENST00000486741 LCN6P62502 163 aa12.3□□□□□ -0.44
HMGN1-216ENST00000486741 RAB40BQ12829 278 aa12.3□□□□□ -0.44
HMGN1-216ENST00000486741 CRMP1Q14194 572 aa12.3□□□□□ -0.44
HMGN1-216ENST00000486741 HYAL4Q2M3T9 481 aa12.3□□□□□ -0.44
HMGN1-216ENST00000486741 CAMKMTQ7Z624 323 aa12.3□□□□□ -0.44
HMGN1-216ENST00000486741 TDHQ8IZJ6 230 aa12.3□□□□□ -0.44
HMGN1-216ENST00000486741 ZNF639Q9UID6 485 aa12.3□□□□□ -0.44
HMGN1-216ENST00000486741 SLC6A14Q9UN76 642 aa12.3□□□□□ -0.44
HMGN1-216ENST00000486741 ASB4Q9Y574 426 aa12.3□□□□□ -0.44
HMGN1-216ENST00000486741 LRRC37A2A6NM11 1700 aa12.29□□□□□ -0.44
HMGN1-216ENST00000486741 A0A1W2PRQ8 180 aa12.29□□□□□ -0.44
HMGN1-216ENST00000486741 FAM172BPA6NC97 362 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms