RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 TM9SF4Q92544 642 aa11.65□□□□□ -0.54
HDAC6-229ENST00000486665 ZNF524Q96C55 264 aa11.65□□□□□ -0.54
HDAC6-229ENST00000486665 SH3YL1Q96HL8 342 aaPredicted RBP11.65□□□□□ -0.54
HDAC6-229ENST00000486665 HSH2DQ96JZ2 352 aa11.65□□□□□ -0.54
HDAC6-229ENST00000486665 LRGUKQ96M69 825 aa11.65□□□□□ -0.54
HDAC6-229ENST00000486665 C5orf34Q96MH7 638 aa11.65□□□□□ -0.54
HDAC6-229ENST00000486665 FRMD6Q96NE9 622 aa11.65□□□□□ -0.54
HDAC6-229ENST00000486665 ARHGDIGQ99819 225 aa11.65□□□□□ -0.54
HDAC6-229ENST00000486665 DOHHQ9BU89 302 aa11.65□□□□□ -0.54
HDAC6-229ENST00000486665 PRR14Q9BWN1 585 aa11.65□□□□□ -0.54
HDAC6-229ENST00000486665 CACYBPQ9HB71 228 aaKnown RBP11.65□□□□□ -0.54
HDAC6-229ENST00000486665 ADPRHL2Q9NX46 363 aa11.65□□□□□ -0.54
HDAC6-229ENST00000486665 DNAJB12Q9NXW2 375 aaKnown RBP11.65□□□□□ -0.54
HDAC6-229ENST00000486665 TUBA8Q9NY65 449 aaPredicted RBP11.65□□□□□ -0.54
HDAC6-229ENST00000486665 MED11Q9P086 117 aa11.65□□□□□ -0.54
HDAC6-229ENST00000486665 RPS6KA6Q9UK32 745 aa11.65□□□□□ -0.54
HDAC6-229ENST00000486665 SLC35A3Q9Y2D2 325 aa11.65□□□□□ -0.54
HDAC6-229ENST00000486665 WIF1Q9Y5W5 379 aa11.65□□□□□ -0.54
HDAC6-229ENST00000486665 IGLV3-32A0A0A0MS00 114 aa11.64□□□□□ -0.55
HDAC6-229ENST00000486665 AQP12BA6NM10 295 aa11.64□□□□□ -0.55
HDAC6-229ENST00000486665 H3BNH8 94 aa11.64□□□□□ -0.55
HDAC6-229ENST00000486665 M0R3H8 397 aa11.64□□□□□ -0.55
HDAC6-229ENST00000486665 GNB5O14775 395 aa11.64□□□□□ -0.55
HDAC6-229ENST00000486665 ZNF264O43296 627 aa11.64□□□□□ -0.55
HDAC6-229ENST00000486665 GMFGO60234 142 aa11.64□□□□□ -0.55
HDAC6-229ENST00000486665 ADAM11O75078 769 aa11.64□□□□□ -0.55
HDAC6-229ENST00000486665 CYP7B1O75881 506 aa11.64□□□□□ -0.55
HDAC6-229ENST00000486665 SNX4O95219 450 aa11.64□□□□□ -0.55
HDAC6-229ENST00000486665 UBTFL6P0CB48 400 aaPredicted RBP11.64□□□□□ -0.55
HDAC6-229ENST00000486665 GKN3PP0CG01 181 aa11.64□□□□□ -0.55
HDAC6-229ENST00000486665 UBL4AP11441 157 aa11.64□□□□□ -0.55
HDAC6-229ENST00000486665 PRG2P13727 222 aa11.64□□□□□ -0.55
HDAC6-229ENST00000486665 OR1E2P47887 323 aa11.64□□□□□ -0.55
HDAC6-229ENST00000486665 HOXC5Q00444 222 aa11.64□□□□□ -0.55
HDAC6-229ENST00000486665 ZNF117Q03924 483 aa11.64□□□□□ -0.55
HDAC6-229ENST00000486665 C17orf67Q0P5P2 114 aa11.64□□□□□ -0.55
HDAC6-229ENST00000486665 SKP2Q13309 424 aa11.64□□□□□ -0.55
HDAC6-229ENST00000486665 KPNB1Q14974 876 aaKnown RBP11.64□□□□□ -0.55
HDAC6-229ENST00000486665 NPTX1Q15818 432 aa11.64□□□□□ -0.55
HDAC6-229ENST00000486665 C4orf17Q53FE4 359 aa11.64□□□□□ -0.55
HDAC6-229ENST00000486665 MTX3Q5HYI7 312 aa11.64□□□□□ -0.55
HDAC6-229ENST00000486665 TBCELQ5QJ74 424 aa11.64□□□□□ -0.55
HDAC6-229ENST00000486665 Q6ZS92 163 aa11.64□□□□□ -0.55
HDAC6-229ENST00000486665 SPATA24Q86W54 205 aa11.64□□□□□ -0.55
HDAC6-229ENST00000486665 GRAMD2AQ8IUY3 354 aa11.64□□□□□ -0.55
HDAC6-229ENST00000486665 AQP12AQ8IXF9 295 aa11.64□□□□□ -0.55
HDAC6-229ENST00000486665 CMIPQ8IY22 773 aa11.64□□□□□ -0.55
HDAC6-229ENST00000486665 FAM71CQ8NEG0 241 aa11.64□□□□□ -0.55
HDAC6-229ENST00000486665 OR2M7Q8NG81 312 aa11.64□□□□□ -0.55
HDAC6-229ENST00000486665 TMEM41AQ96HV5 264 aa11.64□□□□□ -0.55
HDAC6-229ENST00000486665 PYURFQ96I23 114 aa11.64□□□□□ -0.55
HDAC6-229ENST00000486665 RNF145Q96MT1 663 aa11.64□□□□□ -0.55
HDAC6-229ENST00000486665 TRIM15Q9C019 465 aa11.64□□□□□ -0.55
HDAC6-229ENST00000486665 LAT2Q9GZY6 243 aa11.64□□□□□ -0.55
HDAC6-229ENST00000486665 DSN1Q9H410 356 aa11.64□□□□□ -0.55
HDAC6-229ENST00000486665 DENND2DQ9H6A0 471 aaPredicted RBP11.64□□□□□ -0.55
HDAC6-229ENST00000486665 SDHAF3Q9NRP4 125 aa11.64□□□□□ -0.55
HDAC6-229ENST00000486665 BAG5Q9UL15 447 aa11.64□□□□□ -0.55
HDAC6-229ENST00000486665 SAMD4AQ9UPU9 718 aaKnown RBP11.64□□□□□ -0.55
HDAC6-229ENST00000486665 SH3GLB1Q9Y371 365 aa11.64□□□□□ -0.55
HDAC6-229ENST00000486665 HIVEP3Q5T1R4 2406 aa11.64□□□□□ -0.55
HDAC6-229ENST00000486665 TRAV17A0A0B4J275 112 aa11.63□□□□□ -0.55
HDAC6-229ENST00000486665 TCRBV3S1A0A5B6 114 aa11.63□□□□□ -0.55
HDAC6-229ENST00000486665 LRRC3CA6NJW4 275 aa11.63□□□□□ -0.55
HDAC6-229ENST00000486665 SYT5O00445 386 aa11.63□□□□□ -0.55
HDAC6-229ENST00000486665 AP3D1O14617 1153 aa11.63□□□□□ -0.55
HDAC6-229ENST00000486665 SNPHO15079 494 aa11.63□□□□□ -0.55
HDAC6-229ENST00000486665 HCRTR2O43614 444 aa11.63□□□□□ -0.55
HDAC6-229ENST00000486665 EIF4E2O60573 245 aaKnown RBP11.63□□□□□ -0.55
HDAC6-229ENST00000486665 TPST2O60704 377 aa11.63□□□□□ -0.55
HDAC6-229ENST00000486665 SEMA7AO75326 666 aa11.63□□□□□ -0.55
HDAC6-229ENST00000486665 STAMBPO95630 424 aa11.63□□□□□ -0.55
HDAC6-229ENST00000486665 SEMG1P04279 462 aa11.63□□□□□ -0.55
HDAC6-229ENST00000486665 C8BP07358 591 aa11.63□□□□□ -0.55
HDAC6-229ENST00000486665 ACAA2P42765 397 aaKnown RBP11.63□□□□□ -0.55
HDAC6-229ENST00000486665 MEOX1P50221 254 aa11.63□□□□□ -0.55
HDAC6-229ENST00000486665 ZNF136P52737 540 aa11.63□□□□□ -0.55
HDAC6-229ENST00000486665 FOXO1Q12778 655 aa11.63□□□□□ -0.55
HDAC6-229ENST00000486665 NRF1Q16656 503 aa11.63□□□□□ -0.55
HDAC6-229ENST00000486665 ZSWIM7Q19AV6 140 aa11.63□□□□□ -0.55
HDAC6-229ENST00000486665 PLEKHN1Q494U1 663 aaPredicted RBP11.63□□□□□ -0.55
HDAC6-229ENST00000486665 NADK2Q4G0N4 442 aa11.63□□□□□ -0.55
HDAC6-229ENST00000486665 PRR30Q53SZ7 412 aaPredicted RBP11.63□□□□□ -0.55
HDAC6-229ENST00000486665 TIGD3Q6B0B8 471 aa11.63□□□□□ -0.55
HDAC6-229ENST00000486665 TSEN54Q7Z6J9 526 aaKnown RBP11.63□□□□□ -0.55
HDAC6-229ENST00000486665 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.63□□□□□ -0.55
HDAC6-229ENST00000486665 PACS2Q86VP3 889 aa11.63□□□□□ -0.55
HDAC6-229ENST00000486665 CARM1Q86X55 608 aa11.63□□□□□ -0.55
HDAC6-229ENST00000486665 MISPQ8IVT2 679 aa11.63□□□□□ -0.55
HDAC6-229ENST00000486665 ADGRG5Q8IZF4 528 aa11.63□□□□□ -0.55
HDAC6-229ENST00000486665 FADS6Q8N9I5 356 aa11.63□□□□□ -0.55
HDAC6-229ENST00000486665 OR2M3Q8NG83 312 aa11.63□□□□□ -0.55
HDAC6-229ENST00000486665 OR6T1Q8NGN1 323 aa11.63□□□□□ -0.55
HDAC6-229ENST00000486665 B4GALNT2Q8NHY0 566 aa11.63□□□□□ -0.55
HDAC6-229ENST00000486665 VANGL1Q8TAA9 524 aaPredicted RBP11.63□□□□□ -0.55
HDAC6-229ENST00000486665 RASSF5Q8WWW0 418 aa11.63□□□□□ -0.55
HDAC6-229ENST00000486665 LZICQ8WZA0 190 aa11.63□□□□□ -0.55
HDAC6-229ENST00000486665 PROX1Q92786 737 aa11.63□□□□□ -0.55
HDAC6-229ENST00000486665 SLCO4A1Q96BD0 722 aa11.63□□□□□ -0.55
HDAC6-229ENST00000486665 JSRP1Q96MG2 331 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms