RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 ZNF19P17023 458 aa9.9□□□□□ -0.82
CCDC171-208ENST00000486641 PDHA2P29803 388 aa9.9□□□□□ -0.82
CCDC171-208ENST00000486641 PCBP4P57723 403 aaKnown RBP9.9□□□□□ -0.82
CCDC171-208ENST00000486641 LGALS3BPQ08380 585 aa9.9□□□□□ -0.82
CCDC171-208ENST00000486641 TRAM1Q15629 374 aa9.9□□□□□ -0.82
CCDC171-208ENST00000486641 SYTL3Q4VX76 610 aa9.9□□□□□ -0.82
CCDC171-208ENST00000486641 OR7E24Q6IFN5 339 aa9.9□□□□□ -0.82
CCDC171-208ENST00000486641 HEPHL1Q6MZM0 1159 aa9.9□□□□□ -0.82
CCDC171-208ENST00000486641 BAIAP2L2Q6UXY1 529 aa9.9□□□□□ -0.82
CCDC171-208ENST00000486641 NKAIN4Q8IVV8 208 aa9.9□□□□□ -0.82
CCDC171-208ENST00000486641 DCAF4L2Q8NA75 395 aa9.9□□□□□ -0.82
CCDC171-208ENST00000486641 SMAP2Q8WU79 429 aaPredicted RBP9.9□□□□□ -0.82
CCDC171-208ENST00000486641 AUTS2Q8WXX7 1259 aa9.9□□□□□ -0.82
CCDC171-208ENST00000486641 EXOSC8Q96B26 276 aaKnown RBP9.9□□□□□ -0.82
CCDC171-208ENST00000486641 TM4SF18Q96CE8 201 aa9.9□□□□□ -0.82
CCDC171-208ENST00000486641 PGLYRP3Q96LB9 341 aa9.9□□□□□ -0.82
CCDC171-208ENST00000486641 EFCAB11Q9BUY7 163 aa9.9□□□□□ -0.82
CCDC171-208ENST00000486641 TEX12Q9BXU0 123 aa9.9□□□□□ -0.82
CCDC171-208ENST00000486641 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.9□□□□□ -0.82
CCDC171-208ENST00000486641 SLC25A32Q9H2D1 315 aa9.9□□□□□ -0.82
CCDC171-208ENST00000486641 ELAC1Q9H777 363 aaKnown RBP9.9□□□□□ -0.82
CCDC171-208ENST00000486641 PLEKHA1Q9HB21 404 aa9.9□□□□□ -0.82
CCDC171-208ENST00000486641 GPN1Q9HCN4 374 aaPredicted RBP9.9□□□□□ -0.82
CCDC171-208ENST00000486641 ZMIZ1Q9ULJ6 1067 aa9.9□□□□□ -0.82
CCDC171-208ENST00000486641 AK6Q9Y3D8 172 aaKnown RBP9.9□□□□□ -0.82
CCDC171-208ENST00000486641 NAP1L6A6NFF2 107 aa9.9□□□□□ -0.82
CCDC171-208ENST00000486641 TSPAN6O43657 245 aa9.9□□□□□ -0.82
CCDC171-208ENST00000486641 KHDRBS3O75525 346 aaKnown RBP9.9□□□□□ -0.82
CCDC171-208ENST00000486641 AQP8O94778 261 aa9.9□□□□□ -0.82
CCDC171-208ENST00000486641 ECDO95905 644 aaPredicted RBP9.9□□□□□ -0.82
CCDC171-208ENST00000486641 EGFP01133 1207 aa9.9□□□□□ -0.82
CCDC171-208ENST00000486641 MT-ND5P03915 603 aa9.9□□□□□ -0.82
CCDC171-208ENST00000486641 ATP1B1P05026 303 aa9.9□□□□□ -0.82
CCDC171-208ENST00000486641 CHRM4P08173 479 aa9.9□□□□□ -0.82
CCDC171-208ENST00000486641 ALPPL2P10696 532 aa9.9□□□□□ -0.82
CCDC171-208ENST00000486641 CD53P19397 219 aa9.9□□□□□ -0.82
CCDC171-208ENST00000486641 STAT5AP42229 794 aa9.9□□□□□ -0.82
CCDC171-208ENST00000486641 FNTBP49356 437 aa9.9□□□□□ -0.82
CCDC171-208ENST00000486641 TRAM2Q15035 370 aa9.9□□□□□ -0.82
CCDC171-208ENST00000486641 ZNF528Q3MIS6 628 aa9.9□□□□□ -0.82
CCDC171-208ENST00000486641 CLLU1OSQ5K130 101 aa9.9□□□□□ -0.82
CCDC171-208ENST00000486641 FAM74A1Q5RGS3 127 aa9.9□□□□□ -0.82
CCDC171-208ENST00000486641 ZDHHC20Q5W0Z9 365 aa9.9□□□□□ -0.82
CCDC171-208ENST00000486641 C18orf63Q68DL7 685 aa9.9□□□□□ -0.82
CCDC171-208ENST00000486641 LRRN1Q6UXK5 716 aa9.9□□□□□ -0.82
CCDC171-208ENST00000486641 MEPCEQ7L2J0 689 aaKnown RBP9.9□□□□□ -0.82
CCDC171-208ENST00000486641 SLC44A3Q8N4M1 653 aa9.9□□□□□ -0.82
CCDC171-208ENST00000486641 BBS10Q8TAM1 723 aa9.9□□□□□ -0.82
CCDC171-208ENST00000486641 PIGXQ8TBF5 258 aa9.9□□□□□ -0.82
CCDC171-208ENST00000486641 LGALS14Q8TCE9 139 aa9.9□□□□□ -0.82
CCDC171-208ENST00000486641 GHSRQ92847 366 aa9.9□□□□□ -0.82
CCDC171-208ENST00000486641 TMEM159Q96B96 161 aa9.9□□□□□ -0.82
CCDC171-208ENST00000486641 WDR34Q96EX3 536 aa9.9□□□□□ -0.82
CCDC171-208ENST00000486641 SAMD8Q96LT4 415 aa9.9□□□□□ -0.82
CCDC171-208ENST00000486641 GINS4Q9BRT9 223 aa9.9□□□□□ -0.82
CCDC171-208ENST00000486641 HCAR1Q9BXC0 346 aa9.9□□□□□ -0.82
CCDC171-208ENST00000486641 BIN3Q9NQY0 253 aa9.9□□□□□ -0.82
CCDC171-208ENST00000486641 GPR55Q9Y2T6 319 aaPredicted RBP9.9□□□□□ -0.82
CCDC171-208ENST00000486641 DYRK1BQ9Y463 629 aa9.9□□□□□ -0.82
CCDC171-208ENST00000486641 ANTXRLA6NF34 631 aa9.89□□□□□ -0.83
CCDC171-208ENST00000486641 SNRPGP15A8MWD9 76 aa9.89□□□□□ -0.83
CCDC171-208ENST00000486641 TMEM189-UBE2V1I3L0A0 370 aa9.89□□□□□ -0.83
CCDC171-208ENST00000486641 PIP5K1CO60331 668 aa9.89□□□□□ -0.83
CCDC171-208ENST00000486641 PRAMEF2O60811 474 aa9.89□□□□□ -0.83
CCDC171-208ENST00000486641 PCDH8O95206 1070 aa9.89□□□□□ -0.83
CCDC171-208ENST00000486641 IGSF6O95976 241 aa9.89□□□□□ -0.83
CCDC171-208ENST00000486641 IL5P05113 134 aa9.89□□□□□ -0.83
CCDC171-208ENST00000486641 ZNF35P13682 527 aa9.89□□□□□ -0.83
CCDC171-208ENST00000486641 PTNP21246 168 aa9.89□□□□□ -0.83
CCDC171-208ENST00000486641 MPGP29372 298 aa9.89□□□□□ -0.83
CCDC171-208ENST00000486641 MAT2AP31153 395 aaKnown RBP9.89□□□□□ -0.83
CCDC171-208ENST00000486641 TRHRP34981 398 aaPredicted RBP9.89□□□□□ -0.83
CCDC171-208ENST00000486641 OR12D2P58182 307 aa9.89□□□□□ -0.83
CCDC171-208ENST00000486641 CSRP2Q16527 193 aa9.89□□□□□ -0.83
CCDC171-208ENST00000486641 ZNF805Q5CZA5 627 aa9.89□□□□□ -0.83
CCDC171-208ENST00000486641 ELP2Q6IA86 826 aa9.89□□□□□ -0.83
CCDC171-208ENST00000486641 GLB1LQ6UWU2 654 aa9.89□□□□□ -0.83
CCDC171-208ENST00000486641 SERINC5Q86VE9 423 aa9.89□□□□□ -0.83
CCDC171-208ENST00000486641 SERPINA12Q8IW75 414 aa9.89□□□□□ -0.83
CCDC171-208ENST00000486641 TEX19Q8NA77 164 aa9.89□□□□□ -0.83
CCDC171-208ENST00000486641 OR2T33Q8NG76 320 aa9.89□□□□□ -0.83
CCDC171-208ENST00000486641 OR6K3Q8NGY3 331 aa9.89□□□□□ -0.83
CCDC171-208ENST00000486641 ZNF671Q8TAW3 534 aa9.89□□□□□ -0.83
CCDC171-208ENST00000486641 NARS2Q96I59 477 aaKnown RBP9.89□□□□□ -0.83
CCDC171-208ENST00000486641 PAWRQ96IZ0 340 aaKnown RBP9.89□□□□□ -0.83
CCDC171-208ENST00000486641 C4orf36Q96KX1 117 aa9.89□□□□□ -0.83
CCDC171-208ENST00000486641 C10orf90Q96M02 699 aa9.89□□□□□ -0.83
CCDC171-208ENST00000486641 NDC1Q9BTX1 674 aa9.89□□□□□ -0.83
CCDC171-208ENST00000486641 KLF16Q9BXK1 252 aaPredicted RBP9.89□□□□□ -0.83
CCDC171-208ENST00000486641 BARX1Q9HBU1 254 aaPredicted RBP9.89□□□□□ -0.83
CCDC171-208ENST00000486641 NEUROD4Q9HD90 331 aa9.89□□□□□ -0.83
CCDC171-208ENST00000486641 NTNG1Q9Y2I2 539 aa9.89□□□□□ -0.83
CCDC171-208ENST00000486641 TRAV1-2A0A0B4J238 106 aa9.89□□□□□ -0.83
CCDC171-208ENST00000486641 OR6C74A6NCV1 312 aa9.89□□□□□ -0.83
CCDC171-208ENST00000486641 GPR31O00270 319 aa9.89□□□□□ -0.83
CCDC171-208ENST00000486641 PLPP1O14494 284 aa9.89□□□□□ -0.83
CCDC171-208ENST00000486641 FGF18O76093 207 aa9.89□□□□□ -0.83
CCDC171-208ENST00000486641 ATG12O94817 140 aa9.89□□□□□ -0.83
CCDC171-208ENST00000486641 RASGRP1O95267 797 aa9.89□□□□□ -0.83
CCDC171-208ENST00000486641 MRPL3P09001 348 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms