RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 A0A1W2PPK0 400 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 H2AFB2P0C5Z0 115 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 CPMP14384 443 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 FNTBP49356 437 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 B4GALNT1Q00973 533 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 CHRNEQ04844 493 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 ESCO2Q56NI9 601 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 PGBD2Q6P3X8 592 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 CNIH2Q6PI25 160 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 PRR22Q8IZ63 422 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 CYB561A3Q8NBI2 242 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 OR52R1Q8NGF1 315 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 OR52E2Q8NGJ4 325 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 FGF14Q92915 247 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 CACNG6Q9BXT2 260 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 NT5DC2Q9H857 520 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 BEX1Q9HBH7 125 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 FKBP14Q9NWM8 211 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 SLC23A2Q9UGH3 650 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 KANTRA0A1W2PQU2 76 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 PLPP1O14494 284 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 DAPP51397 102 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 TAS2R43P59537 309 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 PLP2Q04941 152 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 TCTN1Q2MV58 587 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 TMEM150AQ86TG1 271 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 ZNF619Q8N2I2 560 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 OR51L1Q8NGJ5 315 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 OR4K3Q96R72 315 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 QRSL1Q9H0R6 528 aaKnown RBP10.32□□□□□ -0.76
HDAC6-228ENST00000486227 KNTC1P50748 2209 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 SLC22A31A6NKX4 558 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 IL1AP01583 271 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 GPX2P18283 190 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 HSD11B1P28845 292 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 ACVR1BP36896 505 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 ZNF791Q3KP31 576 aaPredicted RBP10.31□□□□□ -0.76
HDAC6-228ENST00000486227 DCST2Q5T1A1 773 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 BCL2L15Q5TBC7 163 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 ARL14Q8N4G2 192 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 OR8K3Q8NH51 312 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 COQ8AQ8NI60 647 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 OR1F2PQ96R84 312 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 CFHR5Q9BXR6 569 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 CRISPLD2Q9H0B8 497 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 USP36Q9P275 1121 aaKnown RBP10.31□□□□□ -0.76
HDAC6-228ENST00000486227 ATG4BQ9Y4P1 393 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 TOXO94900 526 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 BCL6P41182 706 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 CTU2Q2VPK5 515 aaKnown RBP10.31□□□□□ -0.76
HDAC6-228ENST00000486227 LEXMQ3ZCV2 418 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 FAM71E1Q6IPT2 247 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 PODNL1Q6PEZ8 512 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 FAM111BQ6SJ93 734 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 CPOQ8IVL8 374 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 UBQLNLQ8IYU4 475 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 ASB12Q8WXK4 309 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 SLC7A6Q92536 515 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 NXPE2Q96DL1 559 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 PRRC1Q96M27 445 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 HDHD5Q9BXW7 423 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 FOXQ1Q9C009 403 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 PPA2Q9H2U2 334 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 DUSP21Q9H596 190 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 PTTG3PQ9NZH4 202 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 TBC1D29Q9UFV1 150 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 HS3ST3A1Q9Y663 406 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 CSNK1G3Q9Y6M4 447 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 CDH10Q9Y6N8 788 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 NPIPA2E9PIF3 369 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 NPIPA3F8WFD2 350 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 FXYD1O00168 92 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 CAPNS1P04632 268 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 GRPRP30550 384 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 LIPAP38571 399 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 SOX3P41225 446 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 AP2S1P53680 142 aaPredicted RBP10.31□□□□□ -0.76
HDAC6-228ENST00000486227 HTRA4P83105 476 aaPredicted RBP10.31□□□□□ -0.76
HDAC6-228ENST00000486227 FAPQ12884 760 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 LTB4RQ15722 352 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 ZNF750Q32MQ0 723 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 GDPD3Q7L5L3 318 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 TMEM17Q86X19 198 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 ZNF440Q8IYI8 595 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 ANKK1Q8NFD2 765 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 CCDC107Q8WV48 283 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 CCDC120Q96HB5 630 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 GLIPR2Q9H4G4 154 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 ASIC5Q9NY37 505 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 TCRBV5S2A0A599 114 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 CIB4A0PJX0 185 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 SPARCP09486 303 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 TGM1P22735 817 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 ABHD17CQ6PCB6 329 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 USP51Q70EK9 711 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 CREB3L2Q70SY1 520 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 JAGN1Q8N5M9 183 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 SFXN5Q8TD22 340 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 SLC6A18Q96N87 628 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 CENPOQ9BU64 300 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms