RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 ELAVL1Q15717 326 aaKnown RBP8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 IFI44LQ53G44 452 aa8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 CYBRD1Q53TN4 286 aa8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 TTC23Q5W5X9 447 aa8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 OR2T5Q6IEZ7 315 aa8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 OR52E8Q6IFG1 317 aa8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 REEP3Q6NUK4 255 aa8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 ZNF585AQ6P3V2 769 aa8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 SHQ1Q6PI26 577 aaKnown RBP8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 ANGPTL8Q6UXH0 198 aa8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 HSDL2Q6YN16 418 aa8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 C6orf120Q7Z4R8 191 aa8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 RNF130Q86XS8 419 aa8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 ARMC8Q8IUR7 673 aa8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 C9orf40Q8IXQ3 194 aa8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 POGLUT1Q8NBL1 392 aa8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 C7orf57Q8NEG2 295 aa8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 OR2T29Q8NH02 315 aa8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 LILRB4Q8NHJ6 448 aa8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 PNPT1Q8TCS8 783 aaKnown RBP8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 TMBIM1Q969X1 311 aa8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 EXOSC8Q96B26 276 aaKnown RBP8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 C14orf79Q96F83 325 aa8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 TREX2Q9BQ50 279 aaPredicted RBP8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 ADI1Q9BV57 179 aa8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 SPATA5L1Q9BVQ7 753 aa8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 CXorf36Q9H7Y0 433 aa8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 ZDHHC11Q9H8X9 412 aa8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 PROK2Q9HC23 129 aa8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 SIRT3Q9NTG7 399 aaPredicted RBP8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 GPATCH2Q9NW75 528 aa8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 SPRR3Q9UBC9 169 aa8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 CES1P1Q9UKY3 287 aa8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 ATG4BQ9Y4P1 393 aa8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 FAM215AQ9Y5M1 114 aa8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 ORC6Q9Y5N6 252 aa8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 SNX8Q9Y5X2 465 aa8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 KIAA1549Q9HCM3 1950 aa8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 A0A0G2JNJ9 132 aa8.58□□□□□ -1.04
TMEM39A-208ENST00000486159 GLOD5A6NK44 160 aa8.58□□□□□ -1.04
TMEM39A-208ENST00000486159 EI24O14681 340 aa8.58□□□□□ -1.04
TMEM39A-208ENST00000486159 ADAMDEC1O15204 470 aa8.58□□□□□ -1.04
TMEM39A-208ENST00000486159 EMC8O43402 210 aa8.58□□□□□ -1.04
TMEM39A-208ENST00000486159 E2F6O75461 281 aa8.58□□□□□ -1.04
TMEM39A-208ENST00000486159 SERPINB7O75635 380 aa8.58□□□□□ -1.04
TMEM39A-208ENST00000486159 CLPSP04118 112 aa8.58□□□□□ -1.04
TMEM39A-208ENST00000486159 ALPLP05186 524 aa8.58□□□□□ -1.04
TMEM39A-208ENST00000486159 UBTFL6P0CB48 400 aaPredicted RBP8.58□□□□□ -1.04
TMEM39A-208ENST00000486159 GLI4P10075 376 aa8.58□□□□□ -1.04
TMEM39A-208ENST00000486159 THRBP10828 461 aa8.58□□□□□ -1.04
TMEM39A-208ENST00000486159 ETFAP13804 333 aa8.58□□□□□ -1.04
TMEM39A-208ENST00000486159 CDH2P19022 906 aaPredicted RBP8.58□□□□□ -1.04
TMEM39A-208ENST00000486159 EFNA1P20827 205 aaPredicted RBP8.58□□□□□ -1.04
TMEM39A-208ENST00000486159 FPR1P21462 350 aa8.58□□□□□ -1.04
TMEM39A-208ENST00000486159 CPN2P22792 545 aa8.58□□□□□ -1.04
TMEM39A-208ENST00000486159 SSTR2P30874 369 aa8.58□□□□□ -1.04
TMEM39A-208ENST00000486159 DNAJA1P31689 397 aaKnown RBP8.58□□□□□ -1.04
TMEM39A-208ENST00000486159 GPC1P35052 558 aa8.58□□□□□ -1.04
TMEM39A-208ENST00000486159 KHKP50053 298 aa8.58□□□□□ -1.04
TMEM39A-208ENST00000486159 NCBP2P52298 156 aaKnown RBP eCLIP8.58□□□□□ -1.04
TMEM39A-208ENST00000486159 RAD23AP54725 363 aa8.58□□□□□ -1.04
TMEM39A-208ENST00000486159 HSPB3Q12988 150 aa8.58□□□□□ -1.04
TMEM39A-208ENST00000486159 IL18R1Q13478 541 aa8.58□□□□□ -1.04
TMEM39A-208ENST00000486159 PRSS53Q2L4Q9 553 aa8.58□□□□□ -1.04
TMEM39A-208ENST00000486159 SLC36A3Q495N2 470 aa8.58□□□□□ -1.04
TMEM39A-208ENST00000486159 COX20Q5RI15 118 aa8.58□□□□□ -1.04
TMEM39A-208ENST00000486159 C6orf52Q5T4I8 152 aa8.58□□□□□ -1.04
TMEM39A-208ENST00000486159 PRAMEF20Q5VT98 475 aa8.58□□□□□ -1.04
TMEM39A-208ENST00000486159 KRT80Q6KB66 452 aa8.58□□□□□ -1.04
TMEM39A-208ENST00000486159 TRILQ7L0X0 811 aa8.58□□□□□ -1.04
TMEM39A-208ENST00000486159 CDH24Q86UP0 819 aa8.58□□□□□ -1.04
TMEM39A-208ENST00000486159 STK32CQ86UX6 486 aa8.58□□□□□ -1.04
TMEM39A-208ENST00000486159 CLEC4FQ8N1N0 589 aa8.58□□□□□ -1.04
TMEM39A-208ENST00000486159 FAM86B1Q8N7N1 296 aa8.58□□□□□ -1.04
TMEM39A-208ENST00000486159 MORN4Q8NDC4 146 aa8.58□□□□□ -1.04
TMEM39A-208ENST00000486159 MAGEE2Q8TD90 523 aaPredicted RBP8.58□□□□□ -1.04
TMEM39A-208ENST00000486159 GEMIN6Q8WXD5 167 aaKnown RBP8.58□□□□□ -1.04
TMEM39A-208ENST00000486159 RND1Q92730 232 aa8.58□□□□□ -1.04
TMEM39A-208ENST00000486159 SENP5Q96HI0 755 aaPredicted RBP8.58□□□□□ -1.04
TMEM39A-208ENST00000486159 HSH2DQ96JZ2 352 aa8.58□□□□□ -1.04
TMEM39A-208ENST00000486159 SLC35G5Q96KT7 338 aa8.58□□□□□ -1.04
TMEM39A-208ENST00000486159 ZNF607Q96SK3 696 aa8.58□□□□□ -1.04
TMEM39A-208ENST00000486159 EPYCQ99645 322 aa8.58□□□□□ -1.04
TMEM39A-208ENST00000486159 FAM192AQ9GZU8 254 aa8.58□□□□□ -1.04
TMEM39A-208ENST00000486159 TP63Q9H3D4 680 aaPredicted RBP8.58□□□□□ -1.04
TMEM39A-208ENST00000486159 LIME1Q9H400 295 aa8.58□□□□□ -1.04
TMEM39A-208ENST00000486159 GLIPR2Q9H4G4 154 aa8.58□□□□□ -1.04
TMEM39A-208ENST00000486159 MCCC2Q9HCC0 563 aa8.58□□□□□ -1.04
TMEM39A-208ENST00000486159 ALKBH4Q9NXW9 302 aa8.58□□□□□ -1.04
TMEM39A-208ENST00000486159 COQ3Q9NZJ6 369 aa8.58□□□□□ -1.04
TMEM39A-208ENST00000486159 CALML5Q9NZT1 146 aa8.58□□□□□ -1.04
TMEM39A-208ENST00000486159 NDUFA13Q9P0J0 144 aa8.58□□□□□ -1.04
TMEM39A-208ENST00000486159 NTMQ9P121 344 aa8.58□□□□□ -1.04
TMEM39A-208ENST00000486159 P2RX2Q9UBL9 471 aa8.58□□□□□ -1.04
TMEM39A-208ENST00000486159 Q9UFV3 132 aa8.58□□□□□ -1.04
TMEM39A-208ENST00000486159 LIPT1Q9Y234 373 aa8.58□□□□□ -1.04
TMEM39A-208ENST00000486159 PCDHGB3Q9Y5G1 929 aa8.58□□□□□ -1.04
TMEM39A-208ENST00000486159 V9GYQ6 96 aa8.58□□□□□ -1.04
TMEM39A-208ENST00000486159 DNAJC13O75165 2243 aa8.58□□□□□ -1.04
TMEM39A-208ENST00000486159 NINQ8N4C6 2090 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms