RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 CSTAP01040 98 aa11.25□□□□□ -0.61
HMG20B-211ENST00000486028 CHRM4P08173 479 aa11.25□□□□□ -0.61
HMG20B-211ENST00000486028 SNRPB2P08579 225 aaKnown RBP11.25□□□□□ -0.61
HMG20B-211ENST00000486028 ZNF708P17019 499 aa11.25□□□□□ -0.61
HMG20B-211ENST00000486028 ZNF17P17021 662 aa11.25□□□□□ -0.61
HMG20B-211ENST00000486028 HTR1EP28566 365 aa11.25□□□□□ -0.61
HMG20B-211ENST00000486028 TIMP3P35625 211 aa11.25□□□□□ -0.61
HMG20B-211ENST00000486028 EIF1P41567 113 aaKnown RBP11.25□□□□□ -0.61
HMG20B-211ENST00000486028 MVDP53602 400 aa11.25□□□□□ -0.61
HMG20B-211ENST00000486028 SEC24CP53992 1094 aa11.25□□□□□ -0.61
HMG20B-211ENST00000486028 CLDN18P56856 261 aa11.25□□□□□ -0.61
HMG20B-211ENST00000486028 DSTNP60981 165 aa11.25□□□□□ -0.61
HMG20B-211ENST00000486028 ZNF117Q03924 483 aa11.25□□□□□ -0.61
HMG20B-211ENST00000486028 SF3A3Q12874 501 aaKnown RBP eCLIP11.25□□□□□ -0.61
HMG20B-211ENST00000486028 HSPB2Q16082 182 aa11.25□□□□□ -0.61
HMG20B-211ENST00000486028 SYPL1Q16563 259 aa11.25□□□□□ -0.61
HMG20B-211ENST00000486028 SWI5Q1ZZU3 235 aa11.25□□□□□ -0.61
HMG20B-211ENST00000486028 PLPPR5Q32ZL2 321 aa11.25□□□□□ -0.61
HMG20B-211ENST00000486028 PAGE3Q5JUK9 113 aa11.25□□□□□ -0.61
HMG20B-211ENST00000486028 LRIF1Q5T3J3 769 aa11.25□□□□□ -0.61
HMG20B-211ENST00000486028 CGB2Q6NT52 195 aa11.25□□□□□ -0.61
HMG20B-211ENST00000486028 CBLN3Q6UW01 205 aa11.25□□□□□ -0.61
HMG20B-211ENST00000486028 FRRS1Q6ZNA5 592 aa11.25□□□□□ -0.61
HMG20B-211ENST00000486028 CCDC121Q6ZUS5 278 aa11.25□□□□□ -0.61
HMG20B-211ENST00000486028 CCDC71Q8IV32 467 aaPredicted RBP11.25□□□□□ -0.61
HMG20B-211ENST00000486028 MEIOBQ8N635 442 aa11.25□□□□□ -0.61
HMG20B-211ENST00000486028 TMCO5AQ8N6Q1 288 aa11.25□□□□□ -0.61
HMG20B-211ENST00000486028 OR5W2Q8NH69 310 aa11.25□□□□□ -0.61
HMG20B-211ENST00000486028 TUBA1CQ9BQE3 449 aa11.25□□□□□ -0.61
HMG20B-211ENST00000486028 LAT2Q9GZY6 243 aa11.25□□□□□ -0.61
HMG20B-211ENST00000486028 CHST11Q9NPF2 352 aa11.25□□□□□ -0.61
HMG20B-211ENST00000486028 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.25□□□□□ -0.61
HMG20B-211ENST00000486028 CALML5Q9NZT1 146 aa11.25□□□□□ -0.61
HMG20B-211ENST00000486028 KLHL14Q9P2G3 628 aa11.25□□□□□ -0.61
HMG20B-211ENST00000486028 KCNE5Q9UJ90 142 aa11.25□□□□□ -0.61
HMG20B-211ENST00000486028 ICAM5Q9UMF0 924 aa11.25□□□□□ -0.61
HMG20B-211ENST00000486028 SLC35A3Q9Y2D2 325 aa11.25□□□□□ -0.61
HMG20B-211ENST00000486028 NDUFAF1Q9Y375 327 aa11.25□□□□□ -0.61
HMG20B-211ENST00000486028 NCOA6Q14686 2063 aaPredicted RBP11.24□□□□□ -0.61
HMG20B-211ENST00000486028 A0A0G2JNJ9 132 aa11.24□□□□□ -0.61
HMG20B-211ENST00000486028 AGAP5A6NIR3 686 aa11.24□□□□□ -0.61
HMG20B-211ENST00000486028 EVPLLA8MZ36 301 aa11.24□□□□□ -0.61
HMG20B-211ENST00000486028 H3BML4 177 aa11.24□□□□□ -0.61
HMG20B-211ENST00000486028 ANGPT2O15123 496 aa11.24□□□□□ -0.61
HMG20B-211ENST00000486028 IL2RAP01589 272 aa11.24□□□□□ -0.61
HMG20B-211ENST00000486028 TFPTP0C1Z6 253 aa11.24□□□□□ -0.61
HMG20B-211ENST00000486028 HOXB9P17482 250 aaPredicted RBP11.24□□□□□ -0.61
HMG20B-211ENST00000486028 FADDQ13158 208 aa11.24□□□□□ -0.61
HMG20B-211ENST00000486028 CBFBQ13951 182 aa11.24□□□□□ -0.61
HMG20B-211ENST00000486028 FGFBP1Q14512 234 aa11.24□□□□□ -0.61
HMG20B-211ENST00000486028 RGNQ15493 299 aa11.24□□□□□ -0.61
HMG20B-211ENST00000486028 MAPK14Q16539 360 aa11.24□□□□□ -0.61
HMG20B-211ENST00000486028 NDUFAF6Q330K2 333 aa11.24□□□□□ -0.61
HMG20B-211ENST00000486028 SEM1Q6ZVN7 128 aa11.24□□□□□ -0.61
HMG20B-211ENST00000486028 PEX5LQ8IYB4 626 aa11.24□□□□□ -0.61
HMG20B-211ENST00000486028 UBQLNLQ8IYU4 475 aa11.24□□□□□ -0.61
HMG20B-211ENST00000486028 PLPP7Q8NBV4 271 aa11.24□□□□□ -0.61
HMG20B-211ENST00000486028 GPR119Q8TDV5 335 aa11.24□□□□□ -0.61
HMG20B-211ENST00000486028 SLC38A5Q8WUX1 472 aa11.24□□□□□ -0.61
HMG20B-211ENST00000486028 WNT2BQ93097 391 aa11.24□□□□□ -0.61
HMG20B-211ENST00000486028 ZG16BQ96DA0 208 aa11.24□□□□□ -0.61
HMG20B-211ENST00000486028 ARSGQ96EG1 525 aa11.24□□□□□ -0.61
HMG20B-211ENST00000486028 SLC38A1Q9H2H9 487 aa11.24□□□□□ -0.61
HMG20B-211ENST00000486028 KCNJ16Q9NPI9 418 aa11.24□□□□□ -0.61
HMG20B-211ENST00000486028 SLC25A37Q9NYZ2 338 aa11.24□□□□□ -0.61
HMG20B-211ENST00000486028 SLAMF8Q9P0V8 285 aa11.24□□□□□ -0.61
HMG20B-211ENST00000486028 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.24□□□□□ -0.61
HMG20B-211ENST00000486028 Q9UFV3 132 aa11.24□□□□□ -0.61
HMG20B-211ENST00000486028 CORO2BQ9UQ03 480 aa11.24□□□□□ -0.61
HMG20B-211ENST00000486028 L3MBTL1Q9Y468 752 aa11.24□□□□□ -0.61
HMG20B-211ENST00000486028 GPC6Q9Y625 555 aaPredicted RBP11.24□□□□□ -0.61
HMG20B-211ENST00000486028 PHF3Q92576 2039 aaKnown RBP11.24□□□□□ -0.61
HMG20B-211ENST00000486028 PCNX3Q9H6A9 2034 aa11.24□□□□□ -0.61
HMG20B-211ENST00000486028 CENPEQ02224 2701 aa11.24□□□□□ -0.61
HMG20B-211ENST00000486028 CENPVL1A0A0U1RR11 272 aa11.23□□□□□ -0.61
HMG20B-211ENST00000486028 CLCA1A8K7I4 914 aa11.23□□□□□ -0.61
HMG20B-211ENST00000486028 SHISA8B8ZZ34 492 aa11.23□□□□□ -0.61
HMG20B-211ENST00000486028 DBIP07108 87 aaKnown RBP11.23□□□□□ -0.61
HMG20B-211ENST00000486028 LINGO3P0C6S8 592 aa11.23□□□□□ -0.61
HMG20B-211ENST00000486028 UBTFL6P0CB48 400 aaPredicted RBP11.23□□□□□ -0.61
HMG20B-211ENST00000486028 BMP2P12643 396 aa11.23□□□□□ -0.61
HMG20B-211ENST00000486028 CD1EP15812 388 aa11.23□□□□□ -0.61
HMG20B-211ENST00000486028 DRD4P21917 467 aa11.23□□□□□ -0.61
HMG20B-211ENST00000486028 ME2P23368 584 aa11.23□□□□□ -0.61
HMG20B-211ENST00000486028 ADH6P28332 368 aa11.23□□□□□ -0.61
HMG20B-211ENST00000486028 CEACAM8P31997 349 aaPredicted RBP11.23□□□□□ -0.61
HMG20B-211ENST00000486028 PGM1P36871 562 aa11.23□□□□□ -0.61
HMG20B-211ENST00000486028 CCR4P51679 360 aa11.23□□□□□ -0.61
HMG20B-211ENST00000486028 CRISP3P54108 245 aa11.23□□□□□ -0.61
HMG20B-211ENST00000486028 RPS3AP61247 264 aaKnown RBP11.23□□□□□ -0.61
HMG20B-211ENST00000486028 RAC1P63000 192 aa11.23□□□□□ -0.61
HMG20B-211ENST00000486028 KCNJ10P78508 379 aa11.23□□□□□ -0.61
HMG20B-211ENST00000486028 SKP2Q13309 424 aa11.23□□□□□ -0.61
HMG20B-211ENST00000486028 CDSNQ15517 529 aa11.23□□□□□ -0.61
HMG20B-211ENST00000486028 SP5Q6BEB4 398 aaPredicted RBP11.23□□□□□ -0.61
HMG20B-211ENST00000486028 DLEU7Q6UYE1 221 aa11.23□□□□□ -0.61
HMG20B-211ENST00000486028 MSRB3Q8IXL7 192 aa11.23□□□□□ -0.61
HMG20B-211ENST00000486028 CMIPQ8IY22 773 aa11.23□□□□□ -0.61
HMG20B-211ENST00000486028 DPP10Q8N608 796 aa11.23□□□□□ -0.61
HMG20B-211ENST00000486028 TNIP2Q8NFZ5 429 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms