RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 PYURFQ96I23 114 aa15.54■□□□□ 0.08
VIM-205ENST00000485947 TREX2Q9BQ50 279 aaPredicted RBP15.54■□□□□ 0.08
VIM-205ENST00000485947 ZNF350Q9GZX5 532 aa15.54■□□□□ 0.08
VIM-205ENST00000485947 SLC38A1Q9H2H9 487 aa15.54■□□□□ 0.08
VIM-205ENST00000485947 YY1AP1Q9H869 796 aa15.54■□□□□ 0.08
VIM-205ENST00000485947 ACKR4Q9NPB9 350 aa15.54■□□□□ 0.08
VIM-205ENST00000485947 STX18Q9P2W9 335 aaKnown RBP15.54■□□□□ 0.08
VIM-205ENST00000485947 B4GALT7Q9UBV7 327 aa15.54■□□□□ 0.08
VIM-205ENST00000485947 GPR55Q9Y2T6 319 aaPredicted RBP15.54■□□□□ 0.08
VIM-205ENST00000485947 AP4S1Q9Y587 144 aa15.54■□□□□ 0.08
VIM-205ENST00000485947 NPFFR2Q9Y5X5 522 aa15.54■□□□□ 0.08
VIM-205ENST00000485947 GPC6Q9Y625 555 aaPredicted RBP15.54■□□□□ 0.08
VIM-205ENST00000485947 FRG2CA6NGY1 282 aa15.53■□□□□ 0.08
VIM-205ENST00000485947 H3BNX3 289 aa15.53■□□□□ 0.08
VIM-205ENST00000485947 M0QX08 132 aa15.53■□□□□ 0.08
VIM-205ENST00000485947 STX11O75558 287 aa15.53■□□□□ 0.08
VIM-205ENST00000485947 RAP2AP10114 183 aa15.53■□□□□ 0.08
VIM-205ENST00000485947 FCGR1AP12314 374 aa15.53■□□□□ 0.08
VIM-205ENST00000485947 DRD5P21918 477 aa15.53■□□□□ 0.08
VIM-205ENST00000485947 AQP1P29972 269 aa15.53■□□□□ 0.08
VIM-205ENST00000485947 DNASE1L1P49184 302 aa15.53■□□□□ 0.08
VIM-205ENST00000485947 NR0B1P51843 470 aaKnown RBP15.53■□□□□ 0.08
VIM-205ENST00000485947 SELENOWP63302 87 aa15.53■□□□□ 0.08
VIM-205ENST00000485947 CYBRD1Q53TN4 286 aa15.53■□□□□ 0.08
VIM-205ENST00000485947 RPS26P11Q5JNZ5 115 aaPredicted RBP15.53■□□□□ 0.08
VIM-205ENST00000485947 FBXW10Q5XX13 1052 aa15.53■□□□□ 0.08
VIM-205ENST00000485947 TRILQ7L0X0 811 aa15.53■□□□□ 0.08
VIM-205ENST00000485947 CD163Q86VB7 1156 aa15.53■□□□□ 0.08
VIM-205ENST00000485947 TAMM41Q96BW9 452 aa15.53■□□□□ 0.08
VIM-205ENST00000485947 SARAFQ96BY9 339 aa15.53■□□□□ 0.08
VIM-205ENST00000485947 SLC47A1Q96FL8 570 aa15.53■□□□□ 0.08
VIM-205ENST00000485947 SDF2Q99470 211 aa15.53■□□□□ 0.08
VIM-205ENST00000485947 SAP130Q9H0E3 1048 aa15.53■□□□□ 0.08
VIM-205ENST00000485947 DEFB127Q9H1M4 99 aa15.53■□□□□ 0.08
VIM-205ENST00000485947 CACYBPQ9HB71 228 aaKnown RBP15.53■□□□□ 0.08
VIM-205ENST00000485947 TUBA8Q9NY65 449 aaPredicted RBP15.53■□□□□ 0.08
VIM-205ENST00000485947 CNOT11Q9UKZ1 510 aaKnown RBP15.53■□□□□ 0.08
VIM-205ENST00000485947 AURKCQ9UQB9 309 aa15.53■□□□□ 0.08
VIM-205ENST00000485947 DTX4Q9Y2E6 619 aa15.53■□□□□ 0.08
VIM-205ENST00000485947 WDR45Q9Y484 360 aa15.53■□□□□ 0.08
VIM-205ENST00000485947 F8P00451 2351 aa15.52■□□□□ 0.08
VIM-205ENST00000485947 FIGNL2A6NMB9 653 aa15.52■□□□□ 0.08
VIM-205ENST00000485947 FAM166BA8MTA8 275 aa15.52■□□□□ 0.08
VIM-205ENST00000485947 FAM47E-STBD1D6RA91 191 aa15.52■□□□□ 0.08
VIM-205ENST00000485947 H0Y3Z8 333 aa15.52■□□□□ 0.08
VIM-205ENST00000485947 NME6O75414 186 aaPredicted RBP15.52■□□□□ 0.08
VIM-205ENST00000485947 PRKD3O94806 890 aa15.52■□□□□ 0.08
VIM-205ENST00000485947 ZNF682O95780 498 aa15.52■□□□□ 0.08
VIM-205ENST00000485947 CT45A8P0DMV1 189 aa15.52■□□□□ 0.08
VIM-205ENST00000485947 CT45A9P0DMV2 189 aa15.52■□□□□ 0.08
VIM-205ENST00000485947 PIGAP37287 484 aa15.52■□□□□ 0.08
VIM-205ENST00000485947 MAGEA5P43359 124 aa15.52■□□□□ 0.08
VIM-205ENST00000485947 CRYBA2P53672 197 aa15.52■□□□□ 0.08
VIM-205ENST00000485947 SNTA1Q13424 505 aa15.52■□□□□ 0.08
VIM-205ENST00000485947 CYP27C1Q4G0S4 372 aa15.52■□□□□ 0.08
VIM-205ENST00000485947 CT45A2Q5DJT8 189 aa15.52■□□□□ 0.08
VIM-205ENST00000485947 ENPP6Q6UWR7 440 aa15.52■□□□□ 0.08
VIM-205ENST00000485947 NPSR1Q6W5P4 371 aa15.52■□□□□ 0.08
VIM-205ENST00000485947 FRRS1Q6ZNA5 592 aa15.52■□□□□ 0.08
VIM-205ENST00000485947 ARMC8Q8IUR7 673 aa15.52■□□□□ 0.08
VIM-205ENST00000485947 OR10G3Q8NGC4 313 aa15.52■□□□□ 0.08
VIM-205ENST00000485947 FAM110BQ8TC76 370 aa15.52■□□□□ 0.08
VIM-205ENST00000485947 SPPL2AQ8TCT8 520 aa15.52■□□□□ 0.08
VIM-205ENST00000485947 OIT3Q8WWZ8 545 aa15.52■□□□□ 0.08
VIM-205ENST00000485947 PIK3R3Q92569 461 aa15.52■□□□□ 0.08
VIM-205ENST00000485947 SLCO4A1Q96BD0 722 aa15.52■□□□□ 0.08
VIM-205ENST00000485947 LCORQ96JN0 433 aaPredicted RBP15.52■□□□□ 0.08
VIM-205ENST00000485947 DOHHQ9BU89 302 aa15.52■□□□□ 0.08
VIM-205ENST00000485947 G6PC3Q9BUM1 346 aa15.52■□□□□ 0.08
VIM-205ENST00000485947 ANGPTL4Q9BY76 406 aa15.52■□□□□ 0.08
VIM-205ENST00000485947 MTHFD2LQ9H903 347 aaPredicted RBP15.52■□□□□ 0.08
VIM-205ENST00000485947 MRTO4Q9UKD2 239 aaKnown RBP15.52■□□□□ 0.08
VIM-205ENST00000485947 BAG5Q9UL15 447 aa15.52■□□□□ 0.08
VIM-205ENST00000485947 CBLCQ9ULV8 474 aa15.52■□□□□ 0.08
VIM-205ENST00000485947 IFT52Q9Y366 437 aa15.52■□□□□ 0.08
VIM-205ENST00000485947 OR10H1Q9Y4A9 318 aa15.52■□□□□ 0.08
VIM-205ENST00000485947 NCOA6Q14686 2063 aaPredicted RBP15.52■□□□□ 0.07
VIM-205ENST00000485947 OTOGQ6ZRI0 2925 aa15.51■□□□□ 0.07
VIM-205ENST00000485947 A0A0G2JMM0 328 aa15.51■□□□□ 0.07
VIM-205ENST00000485947 A0A1W2PPB8 328 aa15.51■□□□□ 0.07
VIM-205ENST00000485947 A0A1W2PRS3 328 aa15.51■□□□□ 0.07
VIM-205ENST00000485947 GXYLT2A0PJZ3 443 aa15.51■□□□□ 0.07
VIM-205ENST00000485947 KIR3DP1A8MWS1 328 aa15.51■□□□□ 0.07
VIM-205ENST00000485947 TO15178 435 aa15.51■□□□□ 0.07
VIM-205ENST00000485947 KIAA0513O60268 411 aa15.51■□□□□ 0.07
VIM-205ENST00000485947 WDR1O75083 606 aa15.51■□□□□ 0.07
VIM-205ENST00000485947 KCNK2O95069 426 aa15.51■□□□□ 0.07
VIM-205ENST00000485947 MFN2O95140 757 aa15.51■□□□□ 0.07
VIM-205ENST00000485947 ANPEPP15144 967 aa15.51■□□□□ 0.07
VIM-205ENST00000485947 LCN1P31025 176 aa15.51■□□□□ 0.07
VIM-205ENST00000485947 PSMD4P55036 377 aaKnown RBP15.51■□□□□ 0.07
VIM-205ENST00000485947 CHRNEQ04844 493 aa15.51■□□□□ 0.07
VIM-205ENST00000485947 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.51■□□□□ 0.07
VIM-205ENST00000485947 GXYLT1Q4G148 440 aa15.51■□□□□ 0.07
VIM-205ENST00000485947 TYW3Q6IPR3 259 aaKnown RBP15.51■□□□□ 0.07
VIM-205ENST00000485947 NUP54Q7Z3B4 507 aa15.51■□□□□ 0.07
VIM-205ENST00000485947 GALNT10Q86SR1 603 aa15.51■□□□□ 0.07
VIM-205ENST00000485947 PACS2Q86VP3 889 aa15.51■□□□□ 0.07
VIM-205ENST00000485947 ZNF619Q8N2I2 560 aa15.51■□□□□ 0.07
VIM-205ENST00000485947 DIO2Q92813 273 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms