RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 PERPQ96FX8 193 aa11.86□□□□□ -0.51
UBA3-210ENST00000485424 KLHL15Q96M94 604 aa11.86□□□□□ -0.51
UBA3-210ENST00000485424 BDH2Q9BUT1 245 aa11.86□□□□□ -0.51
UBA3-210ENST00000485424 C1orf50Q9BV19 199 aa11.86□□□□□ -0.51
UBA3-210ENST00000485424 PIGUQ9H490 435 aa11.86□□□□□ -0.51
UBA3-210ENST00000485424 FBXO34Q9NWN3 711 aa11.86□□□□□ -0.51
UBA3-210ENST00000485424 SLC17A7Q9P2U7 560 aa11.86□□□□□ -0.51
UBA3-210ENST00000485424 ANK3Q12955 4377 aaKnown RBP11.85□□□□□ -0.51
UBA3-210ENST00000485424 A0A0J9YW62 118 aa11.85□□□□□ -0.51
UBA3-210ENST00000485424 C6orf47O95873 294 aa11.85□□□□□ -0.51
UBA3-210ENST00000485424 ELK4P28324 431 aa11.85□□□□□ -0.51
UBA3-210ENST00000485424 CCR4P51679 360 aa11.85□□□□□ -0.51
UBA3-210ENST00000485424 NR1H2P55055 460 aa11.85□□□□□ -0.51
UBA3-210ENST00000485424 FOXF1Q12946 379 aa11.85□□□□□ -0.51
UBA3-210ENST00000485424 GUSBP1Q15486 140 aa11.85□□□□□ -0.51
UBA3-210ENST00000485424 DCST2Q5T1A1 773 aa11.85□□□□□ -0.51
UBA3-210ENST00000485424 IL23RQ5VWK5 629 aa11.85□□□□□ -0.51
UBA3-210ENST00000485424 ALKBH2Q6NS38 261 aa11.85□□□□□ -0.51
UBA3-210ENST00000485424 PRSS57Q6UWY2 283 aa11.85□□□□□ -0.51
UBA3-210ENST00000485424 PLEKHM3Q6ZWE6 761 aa11.85□□□□□ -0.51
UBA3-210ENST00000485424 YTHDF3Q7Z739 585 aaKnown RBP11.85□□□□□ -0.51
UBA3-210ENST00000485424 ZAR1Q86SH2 424 aa11.85□□□□□ -0.51
UBA3-210ENST00000485424 WFDC8Q8IUA0 241 aa11.85□□□□□ -0.51
UBA3-210ENST00000485424 ATP6V1C2Q8NEY4 427 aa11.85□□□□□ -0.51
UBA3-210ENST00000485424 RFWD2Q8NHY2 731 aa11.85□□□□□ -0.51
UBA3-210ENST00000485424 MARK4Q96L34 752 aa11.85□□□□□ -0.51
UBA3-210ENST00000485424 TACO1Q9BSH4 297 aaKnown RBP11.85□□□□□ -0.51
UBA3-210ENST00000485424 SIRT3Q9NTG7 399 aaPredicted RBP11.85□□□□□ -0.51
UBA3-210ENST00000485424 GIMAP2Q9UG22 337 aa11.85□□□□□ -0.51
UBA3-210ENST00000485424 GPC6Q9Y625 555 aaPredicted RBP11.85□□□□□ -0.51
UBA3-210ENST00000485424 NPIPA5A0A0B4J1W7 369 aa11.84□□□□□ -0.51
UBA3-210ENST00000485424 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.84□□□□□ -0.51
UBA3-210ENST00000485424 TRIM64A6NGJ6 449 aa11.84□□□□□ -0.51
UBA3-210ENST00000485424 TRIM64BA6NI03 449 aa11.84□□□□□ -0.51
UBA3-210ENST00000485424 KIAA1324LA8MWY0 1029 aaPredicted RBP11.84□□□□□ -0.51
UBA3-210ENST00000485424 NPIPA7E9PJI5 369 aa11.84□□□□□ -0.51
UBA3-210ENST00000485424 SMAD7O15105 426 aaKnown RBP11.84□□□□□ -0.51
UBA3-210ENST00000485424 ADAMDEC1O15204 470 aa11.84□□□□□ -0.51
UBA3-210ENST00000485424 NPIPA8P0DM63 369 aa11.84□□□□□ -0.51
UBA3-210ENST00000485424 LAMP1P11279 417 aa11.84□□□□□ -0.51
UBA3-210ENST00000485424 IL11P20809 199 aa11.84□□□□□ -0.51
UBA3-210ENST00000485424 PRPS1L1P21108 318 aa11.84□□□□□ -0.51
UBA3-210ENST00000485424 LOXP28300 417 aaPredicted RBP11.84□□□□□ -0.51
UBA3-210ENST00000485424 ADH6P28332 368 aa11.84□□□□□ -0.51
UBA3-210ENST00000485424 PCSK6P29122 969 aa11.84□□□□□ -0.51
UBA3-210ENST00000485424 SLC7A1P30825 629 aa11.84□□□□□ -0.51
UBA3-210ENST00000485424 SUMO3P55854 103 aaPredicted RBP11.84□□□□□ -0.51
UBA3-210ENST00000485424 ZNF117Q03924 483 aa11.84□□□□□ -0.51
UBA3-210ENST00000485424 PTGR1Q14914 329 aa11.84□□□□□ -0.51
UBA3-210ENST00000485424 RNPS1Q15287 305 aaKnown RBP11.84□□□□□ -0.51
UBA3-210ENST00000485424 CD226Q15762 336 aa11.84□□□□□ -0.51
UBA3-210ENST00000485424 CTU2Q2VPK5 515 aaKnown RBP11.84□□□□□ -0.51
UBA3-210ENST00000485424 PGS1Q32NB8 556 aa11.84□□□□□ -0.51
UBA3-210ENST00000485424 TOR1AIP2Q8NFQ8 470 aa11.84□□□□□ -0.51
UBA3-210ENST00000485424 STEAP2Q8NFT2 490 aa11.84□□□□□ -0.51
UBA3-210ENST00000485424 OR5AK3PQ8NH89 298 aa11.84□□□□□ -0.51
UBA3-210ENST00000485424 SFXN5Q8TD22 340 aa11.84□□□□□ -0.51
UBA3-210ENST00000485424 TMEM171Q8WVE6 324 aa11.84□□□□□ -0.51
UBA3-210ENST00000485424 ROBO4Q8WZ75 1007 aa11.84□□□□□ -0.51
UBA3-210ENST00000485424 ADGRG7Q96K78 797 aa11.84□□□□□ -0.51
UBA3-210ENST00000485424 NPAS1Q99742 590 aa11.84□□□□□ -0.51
UBA3-210ENST00000485424 DUSP26Q9BV47 211 aa11.84□□□□□ -0.51
UBA3-210ENST00000485424 ROPN1BQ9BZX4 212 aaPredicted RBP11.84□□□□□ -0.51
UBA3-210ENST00000485424 ACTR6Q9GZN1 396 aa11.84□□□□□ -0.51
UBA3-210ENST00000485424 ROPN1Q9HAT0 212 aaPredicted RBP11.84□□□□□ -0.51
UBA3-210ENST00000485424 PCDHGB4Q9UN71 923 aa11.84□□□□□ -0.51
UBA3-210ENST00000485424 CARD8Q9Y2G2 431 aa11.84□□□□□ -0.51
UBA3-210ENST00000485424 GPR52Q9Y2T5 361 aa11.84□□□□□ -0.51
UBA3-210ENST00000485424 DUXAA6NLW8 204 aa11.83□□□□□ -0.52
UBA3-210ENST00000485424 ZNF195O14628 629 aa11.83□□□□□ -0.52
UBA3-210ENST00000485424 CYP7B1O75881 506 aa11.83□□□□□ -0.52
UBA3-210ENST00000485424 NUDT17P0C025 328 aa11.83□□□□□ -0.52
UBA3-210ENST00000485424 IL32P24001 234 aa11.83□□□□□ -0.52
UBA3-210ENST00000485424 AGTR1P30556 359 aa11.83□□□□□ -0.52
UBA3-210ENST00000485424 RNF144AP50876 292 aaPredicted RBP11.83□□□□□ -0.52
UBA3-210ENST00000485424 ATP12AP54707 1039 aa11.83□□□□□ -0.52
UBA3-210ENST00000485424 CBFBQ13951 182 aa11.83□□□□□ -0.52
UBA3-210ENST00000485424 ZNF239Q16600 458 aaKnown RBP11.83□□□□□ -0.52
UBA3-210ENST00000485424 UGT3A2Q3SY77 523 aa11.83□□□□□ -0.52
UBA3-210ENST00000485424 XKR7Q5GH72 579 aa11.83□□□□□ -0.52
UBA3-210ENST00000485424 C6orf136Q5SQH8 315 aa11.83□□□□□ -0.52
UBA3-210ENST00000485424 STAC2Q6ZMT1 411 aa11.83□□□□□ -0.52
UBA3-210ENST00000485424 ZNF704Q6ZNC4 412 aaPredicted RBP11.83□□□□□ -0.52
UBA3-210ENST00000485424 C22orf34Q6ZV56 151 aa11.83□□□□□ -0.52
UBA3-210ENST00000485424 ANKK1Q8NFD2 765 aa11.83□□□□□ -0.52
UBA3-210ENST00000485424 FBXO27Q8NI29 283 aa11.83□□□□□ -0.52
UBA3-210ENST00000485424 PLPPR2Q96GM1 343 aa11.83□□□□□ -0.52
UBA3-210ENST00000485424 OR7D2Q96RA2 312 aa11.83□□□□□ -0.52
UBA3-210ENST00000485424 MDFIQ99750 246 aa11.83□□□□□ -0.52
UBA3-210ENST00000485424 HDHD5Q9BXW7 423 aa11.83□□□□□ -0.52
UBA3-210ENST00000485424 BHLHE41Q9C0J9 482 aaPredicted RBP11.83□□□□□ -0.52
UBA3-210ENST00000485424 OR10A4Q9H209 315 aa11.83□□□□□ -0.52
UBA3-210ENST00000485424 CXorf56Q9H5V9 222 aa11.83□□□□□ -0.52
UBA3-210ENST00000485424 CXorf36Q9H7Y0 433 aa11.83□□□□□ -0.52
UBA3-210ENST00000485424 NGBQ9NPG2 151 aa11.83□□□□□ -0.52
UBA3-210ENST00000485424 NOP53Q9NZM5 478 aaKnown RBP11.83□□□□□ -0.52
UBA3-210ENST00000485424 DTNAQ9Y4J8 743 aa11.83□□□□□ -0.52
UBA3-210ENST00000485424 ZNF264O43296 627 aa11.82□□□□□ -0.52
UBA3-210ENST00000485424 PRKD3O94806 890 aa11.82□□□□□ -0.52
UBA3-210ENST00000485424 AK1P00568 194 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms