RNA–Protein interactions for RNA: ENST00000484441.1

CCDC66-219, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-219ENST00000484441 GABPB1Q06547 395 aaPredicted RBP2.8□□□□□ -1.96
CCDC66-219ENST00000484441 C16orf72Q14CZ0 275 aa2.8□□□□□ -1.96
CCDC66-219ENST00000484441 LANCL3Q6ZV70 420 aa2.8□□□□□ -1.96
CCDC66-219ENST00000484441 ANKRD37Q7Z713 158 aa2.8□□□□□ -1.96
CCDC66-219ENST00000484441 M1APQ8TC57 530 aa2.8□□□□□ -1.96
CCDC66-219ENST00000484441 SDSLQ96GA7 329 aa2.8□□□□□ -1.96
CCDC66-219ENST00000484441 MRPL39Q9NYK5 338 aaKnown RBP2.8□□□□□ -1.96
CCDC66-219ENST00000484441 FOXJ3Q9UPW0 622 aa2.8□□□□□ -1.96
CCDC66-219ENST00000484441 AP4B1Q9Y6B7 739 aa2.8□□□□□ -1.96
CCDC66-219ENST00000484441 SPAG9O60271 1321 aaKnown RBP2.79□□□□□ -1.96
CCDC66-219ENST00000484441 LRCOL1A6NCL2 159 aa2.79□□□□□ -1.96
CCDC66-219ENST00000484441 ZNF44P15621 663 aa2.79□□□□□ -1.96
CCDC66-219ENST00000484441 SERPINA2P20848 420 aa2.79□□□□□ -1.96
CCDC66-219ENST00000484441 ATXN3P54252 364 aaPredicted RBP2.79□□□□□ -1.96
CCDC66-219ENST00000484441 GAMTQ14353 236 aa2.79□□□□□ -1.96
CCDC66-219ENST00000484441 NDUFA9Q16795 377 aa2.79□□□□□ -1.96
CCDC66-219ENST00000484441 SCYL2Q6P3W7 929 aa2.79□□□□□ -1.96
CCDC66-219ENST00000484441 OR5AU1Q8NGC0 362 aa2.79□□□□□ -1.96
CCDC66-219ENST00000484441 CELF6Q96J87 481 aaKnown RBP2.79□□□□□ -1.96
CCDC66-219ENST00000484441 MAGT1Q9H0U3 335 aa2.79□□□□□ -1.96
CCDC66-219ENST00000484441 PSG11Q9UQ72 335 aa2.79□□□□□ -1.96
CCDC66-219ENST00000484441 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.78□□□□□ -1.96
CCDC66-219ENST00000484441 NKX2-6A6NCS4 301 aa2.78□□□□□ -1.96
CCDC66-219ENST00000484441 OR6C65A6NJZ3 312 aa2.78□□□□□ -1.96
CCDC66-219ENST00000484441 KRTAP4-16G5E9R7 235 aaPredicted RBP2.78□□□□□ -1.96
CCDC66-219ENST00000484441 HCRTR1O43613 425 aa2.78□□□□□ -1.96
CCDC66-219ENST00000484441 SSX5O60225 188 aa2.78□□□□□ -1.96
CCDC66-219ENST00000484441 ICOSLGO75144 302 aa2.78□□□□□ -1.96
CCDC66-219ENST00000484441 ZNF780AO75290 641 aaPredicted RBP2.78□□□□□ -1.96
CCDC66-219ENST00000484441 SNAPINO95295 136 aa2.78□□□□□ -1.96
CCDC66-219ENST00000484441 CLUP10909 449 aa2.78□□□□□ -1.96
CCDC66-219ENST00000484441 AXLP30530 894 aa2.78□□□□□ -1.96
CCDC66-219ENST00000484441 OSTNP61366 133 aa2.78□□□□□ -1.96
CCDC66-219ENST00000484441 RGS1Q08116 209 aa2.78□□□□□ -1.96
CCDC66-219ENST00000484441 EIF4EBP1Q13541 118 aaPredicted RBP2.78□□□□□ -1.96
CCDC66-219ENST00000484441 LAGE3Q14657 143 aa2.78□□□□□ -1.96
CCDC66-219ENST00000484441 LIPNQ5VXI9 398 aa2.78□□□□□ -1.96
CCDC66-219ENST00000484441 ZNF429Q86V71 674 aa2.78□□□□□ -1.96
CCDC66-219ENST00000484441 LINC01561Q8N1V8 128 aa2.78□□□□□ -1.96
CCDC66-219ENST00000484441 PINX1Q96BK5 328 aaKnown RBP2.78□□□□□ -1.96
CCDC66-219ENST00000484441 VSTM2LQ96N03 204 aa2.78□□□□□ -1.96
CCDC66-219ENST00000484441 CYP2S1Q96SQ9 504 aa2.78□□□□□ -1.96
CCDC66-219ENST00000484441 TBCDQ9BTW9 1192 aa2.78□□□□□ -1.96
CCDC66-219ENST00000484441 SLC17A9Q9BYT1 436 aa2.78□□□□□ -1.96
CCDC66-219ENST00000484441 ANO10Q9NW15 660 aa2.78□□□□□ -1.96
CCDC66-219ENST00000484441 XPO7Q9UIA9 1087 aaKnown RBP2.78□□□□□ -1.96
CCDC66-219ENST00000484441 BTNL2Q9UIR0 455 aa2.78□□□□□ -1.96
CCDC66-219ENST00000484441 NUDCQ9Y266 331 aa2.78□□□□□ -1.96
CCDC66-219ENST00000484441 PLLPQ9Y342 182 aa2.78□□□□□ -1.96
CCDC66-219ENST00000484441 UGT2A1Q9Y4X1 527 aa2.78□□□□□ -1.96
CCDC66-219ENST00000484441 IGKV2-28A0A075B6P5 120 aa2.77□□□□□ -1.97
CCDC66-219ENST00000484441 DLGAP1O14490 977 aa2.77□□□□□ -1.97
CCDC66-219ENST00000484441 IGKV2D-28P01615 120 aa2.77□□□□□ -1.97
CCDC66-219ENST00000484441 MMP1P03956 469 aa2.77□□□□□ -1.97
CCDC66-219ENST00000484441 OPN1LWP04000 364 aa2.77□□□□□ -1.97
CCDC66-219ENST00000484441 CSF2P04141 144 aa2.77□□□□□ -1.97
CCDC66-219ENST00000484441 ALPPP05187 535 aa2.77□□□□□ -1.97
CCDC66-219ENST00000484441 ALPPL2P10696 532 aa2.77□□□□□ -1.97
CCDC66-219ENST00000484441 PRDX3P30048 256 aaKnown RBP2.77□□□□□ -1.97
CCDC66-219ENST00000484441 CD80P33681 288 aa2.77□□□□□ -1.97
CCDC66-219ENST00000484441 CYLC1P35663 651 aaPredicted RBP2.77□□□□□ -1.97
CCDC66-219ENST00000484441 DLSTP36957 453 aa2.77□□□□□ -1.97
CCDC66-219ENST00000484441 LHX2P50458 406 aa2.77□□□□□ -1.97
CCDC66-219ENST00000484441 NTHL1P78549 312 aa2.77□□□□□ -1.97
CCDC66-219ENST00000484441 PAX5Q02548 391 aa2.77□□□□□ -1.97
CCDC66-219ENST00000484441 RIPPLY1Q0D2K3 151 aa2.77□□□□□ -1.97
CCDC66-219ENST00000484441 ATXN7L3Q14CW9 347 aaPredicted RBP2.77□□□□□ -1.97
CCDC66-219ENST00000484441 NSDHLQ15738 373 aa2.77□□□□□ -1.97
CCDC66-219ENST00000484441 CHI3L2Q15782 390 aa2.77□□□□□ -1.97
CCDC66-219ENST00000484441 ADPRMQ3LIE5 342 aa2.77□□□□□ -1.97
CCDC66-219ENST00000484441 FAM199XQ6PEV8 388 aaPredicted RBP2.77□□□□□ -1.97
CCDC66-219ENST00000484441 VRK2Q86Y07 508 aa2.77□□□□□ -1.97
CCDC66-219ENST00000484441 ELMOD2Q8IZ81 293 aa2.77□□□□□ -1.97
CCDC66-219ENST00000484441 CERS5Q8N5B7 392 aa2.77□□□□□ -1.97
CCDC66-219ENST00000484441 BCORP1Q8N888 145 aa2.77□□□□□ -1.97
CCDC66-219ENST00000484441 C15orf54Q8N8G6 183 aa2.77□□□□□ -1.97
CCDC66-219ENST00000484441 ZNF540Q8NDQ6 660 aa2.77□□□□□ -1.97
CCDC66-219ENST00000484441 ZNF740Q8NDX6 193 aa2.77□□□□□ -1.97
CCDC66-219ENST00000484441 FAM210BQ96KR6 192 aa2.77□□□□□ -1.97
CCDC66-219ENST00000484441 OR5B2Q96R09 309 aa2.77□□□□□ -1.97
CCDC66-219ENST00000484441 TESK2Q96S53 571 aa2.77□□□□□ -1.97
CCDC66-219ENST00000484441 RTBDNQ9BSG5 229 aaPredicted RBP2.77□□□□□ -1.97
CCDC66-219ENST00000484441 ANAPC7Q9UJX3 599 aa2.77□□□□□ -1.97
CCDC66-219ENST00000484441 ESYT2A0FGR8 921 aa2.76□□□□□ -1.97
CCDC66-219ENST00000484441 FAM74A7A6NL05 159 aa2.76□□□□□ -1.97
CCDC66-219ENST00000484441 DUX1O43812 170 aa2.76□□□□□ -1.97
CCDC66-219ENST00000484441 ECI2O75521 394 aa2.76□□□□□ -1.97
CCDC66-219ENST00000484441 EPHX2P34913 555 aa2.76□□□□□ -1.97
CCDC66-219ENST00000484441 SLC26A5P58743 744 aa2.76□□□□□ -1.97
CCDC66-219ENST00000484441 SLC10A7Q0GE19 358 aa2.76□□□□□ -1.97
CCDC66-219ENST00000484441 UNC119Q13432 240 aa2.76□□□□□ -1.97
CCDC66-219ENST00000484441 FAM74A3Q4VXF1 159 aa2.76□□□□□ -1.97
CCDC66-219ENST00000484441 ATF7IP2Q5U623 682 aa2.76□□□□□ -1.97
CCDC66-219ENST00000484441 FAHD2BQ6P2I3 314 aaPredicted RBP2.76□□□□□ -1.97
CCDC66-219ENST00000484441 ARCQ7LC44 396 aa2.76□□□□□ -1.97
CCDC66-219ENST00000484441 MSANTD4Q8NCY6 345 aa2.76□□□□□ -1.97
CCDC66-219ENST00000484441 UCN3Q969E3 161 aa2.76□□□□□ -1.97
CCDC66-219ENST00000484441 C14orf79Q96F83 325 aa2.76□□□□□ -1.97
CCDC66-219ENST00000484441 FAHD2AQ96GK7 314 aa2.76□□□□□ -1.97
CCDC66-219ENST00000484441 DUSP16Q9BY84 665 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms