RNA–Protein interactions for RNA: ENST00000483159.1

MRPL55-229, Transcript of mitochondrial ribosomal protein L55, human

TSL 5

Gene MRPL55, Length 790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-229	ENST00000483159	NKX2-6	A6NCS4	301 aa		11.14	□□□□□ -0.63
MRPL55-229	ENST00000483159	AGAP5	A6NIR3	686 aa		11.14	□□□□□ -0.63
MRPL55-229	ENST00000483159	KDM4E	B2RXH2	506 aa	Predicted RBP	11.14	□□□□□ -0.63
MRPL55-229	ENST00000483159	CLIC1	O00299	241 aa		11.14	□□□□□ -0.63
MRPL55-229	ENST00000483159	ETV2	O00321	342 aa	Predicted RBP	11.14	□□□□□ -0.63
MRPL55-229	ENST00000483159	NR5A2	O00482	541 aa		11.14	□□□□□ -0.63
MRPL55-229	ENST00000483159	ADAMDEC1	O15204	470 aa		11.14	□□□□□ -0.63
MRPL55-229	ENST00000483159	OIP5	O43482	229 aa		11.14	□□□□□ -0.63
MRPL55-229	ENST00000483159	CRH	P06850	196 aa		11.14	□□□□□ -0.63
MRPL55-229	ENST00000483159	VIM	P08670	466 aa	Known RBP	11.14	□□□□□ -0.63
MRPL55-229	ENST00000483159	TFPT	P0C1Z6	253 aa		11.14	□□□□□ -0.63
MRPL55-229	ENST00000483159	COX6B1	P14854	86 aa		11.14	□□□□□ -0.63
MRPL55-229	ENST00000483159	HOXB9	P17482	250 aa	Predicted RBP	11.14	□□□□□ -0.63
MRPL55-229	ENST00000483159	CAPN3	P20807	821 aa		11.14	□□□□□ -0.63
MRPL55-229	ENST00000483159	PPIB	P23284	216 aa	Known RBP	11.14	□□□□□ -0.63
MRPL55-229	ENST00000483159	ME2	P23368	584 aa		11.14	□□□□□ -0.63
MRPL55-229	ENST00000483159	PGM1	P36871	562 aa		11.14	□□□□□ -0.63
MRPL55-229	ENST00000483159	MDH1	P40925	334 aa	Known RBP	11.14	□□□□□ -0.63
MRPL55-229	ENST00000483159	KCNJ10	P78508	379 aa		11.14	□□□□□ -0.63
MRPL55-229	ENST00000483159	GUCY1A3	Q02108	690 aa		11.14	□□□□□ -0.63
MRPL55-229	ENST00000483159	FADD	Q13158	208 aa		11.14	□□□□□ -0.63
MRPL55-229	ENST00000483159	SKP2	Q13309	424 aa		11.14	□□□□□ -0.63
MRPL55-229	ENST00000483159	FGFBP1	Q14512	234 aa		11.14	□□□□□ -0.63
MRPL55-229	ENST00000483159	RGN	Q15493	299 aa		11.14	□□□□□ -0.63
MRPL55-229	ENST00000483159	MAPK14	Q16539	360 aa		11.14	□□□□□ -0.63
MRPL55-229	ENST00000483159	SYPL1	Q16563	259 aa		11.14	□□□□□ -0.63
MRPL55-229	ENST00000483159	SLC25A53	Q5H9E4	307 aa		11.14	□□□□□ -0.63
MRPL55-229	ENST00000483159	OR2A2	Q6IF42	318 aa		11.14	□□□□□ -0.63
MRPL55-229	ENST00000483159	POMZP3	Q6PJE2	187 aa		11.14	□□□□□ -0.63
MRPL55-229	ENST00000483159	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	11.14	□□□□□ -0.63
MRPL55-229	ENST00000483159	UBQLNL	Q8IYU4	475 aa		11.14	□□□□□ -0.63
MRPL55-229	ENST00000483159	METTL25	Q8N6Q8	603 aa		11.14	□□□□□ -0.63
MRPL55-229	ENST00000483159	ANKFN1	Q8N957	763 aa		11.14	□□□□□ -0.63
MRPL55-229	ENST00000483159	C9orf106	Q8NAJ2	232 aa		11.14	□□□□□ -0.63
MRPL55-229	ENST00000483159	NAXE	Q8NCW5	288 aa		11.14	□□□□□ -0.63
MRPL55-229	ENST00000483159	FAM71C	Q8NEG0	241 aa		11.14	□□□□□ -0.63
MRPL55-229	ENST00000483159	PNPT1	Q8TCS8	783 aa	Known RBP	11.14	□□□□□ -0.63
MRPL55-229	ENST00000483159	MARVELD3	Q96A59	401 aa		11.14	□□□□□ -0.63
MRPL55-229	ENST00000483159	ZG16B	Q96DA0	208 aa		11.14	□□□□□ -0.63
MRPL55-229	ENST00000483159	LRRC46	Q96FV0	321 aa		11.14	□□□□□ -0.63
MRPL55-229	ENST00000483159	MRGPRX4	Q96LA9	322 aa		11.14	□□□□□ -0.63
MRPL55-229	ENST00000483159	RNF145	Q96MT1	663 aa		11.14	□□□□□ -0.63
MRPL55-229	ENST00000483159	TREX2	Q9BQ50	279 aa	Predicted RBP	11.14	□□□□□ -0.63
MRPL55-229	ENST00000483159	SLC38A1	Q9H2H9	487 aa		11.14	□□□□□ -0.63
MRPL55-229	ENST00000483159	SLC24A3	Q9HC58	644 aa		11.14	□□□□□ -0.63
MRPL55-229	ENST00000483159	EXOSC3	Q9NQT5	275 aa	Known RBP	11.14	□□□□□ -0.63
MRPL55-229	ENST00000483159	FGFR1OP2	Q9NVK5	253 aa		11.14	□□□□□ -0.63
MRPL55-229	ENST00000483159	CENPE	Q02224	2701 aa		11.13	□□□□□ -0.63
MRPL55-229	ENST00000483159	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		11.13	□□□□□ -0.63
MRPL55-229	ENST00000483159	CENPVL1	A0A0U1RR11	272 aa		11.13	□□□□□ -0.63
MRPL55-229	ENST00000483159	TMEM247	A6NEH6	219 aa		11.13	□□□□□ -0.63
MRPL55-229	ENST00000483159	SLC22A20	A6NK97	555 aa		11.13	□□□□□ -0.63
MRPL55-229	ENST00000483159	GJE1	A6NN92	205 aa		11.13	□□□□□ -0.63
MRPL55-229	ENST00000483159	FAM90A27P	A6NNH2	459 aa		11.13	□□□□□ -0.63
MRPL55-229	ENST00000483159	C19orf84	I3L1E1	186 aa		11.13	□□□□□ -0.63
MRPL55-229	ENST00000483159	SYT5	O00445	386 aa		11.13	□□□□□ -0.63
MRPL55-229	ENST00000483159	NTN1	O95631	604 aa		11.13	□□□□□ -0.63
MRPL55-229	ENST00000483159	DBI	P07108	87 aa	Known RBP	11.13	□□□□□ -0.63
MRPL55-229	ENST00000483159	CHRM4	P08173	479 aa		11.13	□□□□□ -0.63
MRPL55-229	ENST00000483159	TMIGD3	P0DMS9	266 aa	Predicted RBP	11.13	□□□□□ -0.63
MRPL55-229	ENST00000483159	BMP2	P12643	396 aa		11.13	□□□□□ -0.63
MRPL55-229	ENST00000483159	ETFA	P13804	333 aa		11.13	□□□□□ -0.63
MRPL55-229	ENST00000483159	PRKCA	P17252	672 aa		11.13	□□□□□ -0.63
MRPL55-229	ENST00000483159	IGFBP2	P18065	325 aa		11.13	□□□□□ -0.63
MRPL55-229	ENST00000483159	PGC	P20142	388 aa		11.13	□□□□□ -0.63
MRPL55-229	ENST00000483159	PEX19	P40855	299 aa		11.13	□□□□□ -0.63
MRPL55-229	ENST00000483159	ZNF136	P52737	540 aa		11.13	□□□□□ -0.63
MRPL55-229	ENST00000483159	CRISP3	P54108	245 aa		11.13	□□□□□ -0.63
MRPL55-229	ENST00000483159	CLDN20	P56880	219 aa		11.13	□□□□□ -0.63
MRPL55-229	ENST00000483159	DSTN	P60981	165 aa		11.13	□□□□□ -0.63
MRPL55-229	ENST00000483159	ZSWIM7	Q19AV6	140 aa		11.13	□□□□□ -0.63
MRPL55-229	ENST00000483159	FBXL19-AS1	Q494R0	122 aa		11.13	□□□□□ -0.63
MRPL55-229	ENST00000483159	GTDC1	Q4AE62	458 aa		11.13	□□□□□ -0.63
MRPL55-229	ENST00000483159	PAGE3	Q5JUK9	113 aa		11.13	□□□□□ -0.63
MRPL55-229	ENST00000483159	PDSS1	Q5T2R2	415 aa		11.13	□□□□□ -0.63
MRPL55-229	ENST00000483159	PRAMEF8	Q5VWM4	474 aa		11.13	□□□□□ -0.63
MRPL55-229	ENST00000483159	PRAMEF7	Q5VXH5	474 aa		11.13	□□□□□ -0.63
MRPL55-229	ENST00000483159	CRYBG3	Q68DQ2	2970 aa		11.13	□□□□□ -0.63
MRPL55-229	ENST00000483159	ESPNL	Q6ZVH7	1005 aa		11.13	□□□□□ -0.63
MRPL55-229	ENST00000483159	OLIG3	Q7RTU3	272 aa		11.13	□□□□□ -0.63
MRPL55-229	ENST00000483159	GGN	Q86UU5	652 aa		11.13	□□□□□ -0.63
MRPL55-229	ENST00000483159	GRAMD2A	Q8IUY3	354 aa		11.13	□□□□□ -0.63
MRPL55-229	ENST00000483159	LILRA2	Q8N149	483 aa		11.13	□□□□□ -0.63
MRPL55-229	ENST00000483159	POC1B	Q8TC44	478 aa		11.13	□□□□□ -0.63
MRPL55-229	ENST00000483159	SLC38A5	Q8WUX1	472 aa		11.13	□□□□□ -0.63
MRPL55-229	ENST00000483159	TMEM234	Q8WY98	164 aa		11.13	□□□□□ -0.63
MRPL55-229	ENST00000483159	ST8SIA1	Q92185	356 aa		11.13	□□□□□ -0.63
MRPL55-229	ENST00000483159	AURKB	Q96GD4	344 aa	Predicted RBP	11.13	□□□□□ -0.63
MRPL55-229	ENST00000483159	THUMPD3	Q9BV44	507 aa	Known RBP	11.13	□□□□□ -0.63
MRPL55-229	ENST00000483159	SFXN3	Q9BWM7	321 aa		11.13	□□□□□ -0.63
MRPL55-229	ENST00000483159	TMEM120A	Q9BXJ8	343 aa		11.13	□□□□□ -0.63
MRPL55-229	ENST00000483159	A4GALT	Q9NPC4	353 aa		11.13	□□□□□ -0.63
MRPL55-229	ENST00000483159	SLC25A37	Q9NYZ2	338 aa		11.13	□□□□□ -0.63
MRPL55-229	ENST00000483159	FOXD3	Q9UJU5	478 aa	Predicted RBP	11.13	□□□□□ -0.63
MRPL55-229	ENST00000483159	CORO2B	Q9UQ03	480 aa		11.13	□□□□□ -0.63
MRPL55-229	ENST00000483159	NDUFAF1	Q9Y375	327 aa		11.13	□□□□□ -0.63
MRPL55-229	ENST00000483159	ADGRG4	Q8IZF6	3080 aa		11.12	□□□□□ -0.63
MRPL55-229	ENST00000483159	DSPP	Q9NZW4	1301 aa		11.12	□□□□□ -0.63
MRPL55-229	ENST00000483159		A0A0G2JPF8	293 aa		11.12	□□□□□ -0.63
MRPL55-229	ENST00000483159	HNRNPCL2	B2RXH8	293 aa		11.12	□□□□□ -0.63

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