RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 B3GALT5-AS1P59052 145 aa11.1□□□□□ -0.63
TRA2B-212ENST00000480461 HSF1Q00613 529 aa11.1□□□□□ -0.63
TRA2B-212ENST00000480461 SKP2Q13309 424 aa11.1□□□□□ -0.63
TRA2B-212ENST00000480461 GNA13Q14344 377 aa11.1□□□□□ -0.63
TRA2B-212ENST00000480461 SLC10A1Q14973 349 aa11.1□□□□□ -0.63
TRA2B-212ENST00000480461 DUSP7Q16829 419 aa11.1□□□□□ -0.63
TRA2B-212ENST00000480461 EIPR1Q53HC9 387 aa11.1□□□□□ -0.63
TRA2B-212ENST00000480461 FAM180AQ6UWF9 173 aa11.1□□□□□ -0.63
TRA2B-212ENST00000480461 ZNF836Q6ZNA1 936 aa11.1□□□□□ -0.63
TRA2B-212ENST00000480461 CCDC80Q76M96 950 aa11.1□□□□□ -0.63
TRA2B-212ENST00000480461 YRDCQ86U90 279 aaKnown RBP11.1□□□□□ -0.63
TRA2B-212ENST00000480461 MICU2Q8IYU8 434 aa11.1□□□□□ -0.63
TRA2B-212ENST00000480461 ZNF614Q8N883 585 aa11.1□□□□□ -0.63
TRA2B-212ENST00000480461 ZNF527Q8NB42 609 aa11.1□□□□□ -0.63
TRA2B-212ENST00000480461 FAM98AQ8NCA5 519 aaKnown RBP11.1□□□□□ -0.63
TRA2B-212ENST00000480461 OR2T12Q8NG77 320 aa11.1□□□□□ -0.63
TRA2B-212ENST00000480461 GPR32P1Q8NGA4 272 aa11.1□□□□□ -0.63
TRA2B-212ENST00000480461 BBS10Q8TAM1 723 aa11.1□□□□□ -0.63
TRA2B-212ENST00000480461 TAMM41Q96BW9 452 aa11.1□□□□□ -0.63
TRA2B-212ENST00000480461 SPAG4Q9NPE6 437 aa11.1□□□□□ -0.63
TRA2B-212ENST00000480461 SDHAF3Q9NRP4 125 aa11.1□□□□□ -0.63
TRA2B-212ENST00000480461 PLSCR2Q9NRY7 297 aa11.1□□□□□ -0.63
TRA2B-212ENST00000480461 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.1□□□□□ -0.63
TRA2B-212ENST00000480461 ADA2Q9NZK5 511 aa11.1□□□□□ -0.63
TRA2B-212ENST00000480461 BOKQ9UMX3 212 aaPredicted RBP11.1□□□□□ -0.63
TRA2B-212ENST00000480461 ZNF443Q9Y2A4 671 aaPredicted RBP11.1□□□□□ -0.63
TRA2B-212ENST00000480461 HIVEP1P15822 2718 aa11.09□□□□□ -0.63
TRA2B-212ENST00000480461 C15orf38-AP3S2A0A0A6YYH1 394 aa11.09□□□□□ -0.63
TRA2B-212ENST00000480461 ELOVL7A1L3X0 281 aa11.09□□□□□ -0.63
TRA2B-212ENST00000480461 CDHR4A6H8M9 788 aa11.09□□□□□ -0.63
TRA2B-212ENST00000480461 SHISA8B8ZZ34 492 aa11.09□□□□□ -0.63
TRA2B-212ENST00000480461 C5orf58C9J3I9 102 aa11.09□□□□□ -0.63
TRA2B-212ENST00000480461 GTPBP1O00178 669 aaKnown RBP11.09□□□□□ -0.63
TRA2B-212ENST00000480461 ZNF264O43296 627 aa11.09□□□□□ -0.63
TRA2B-212ENST00000480461 HNRNPRO43390 633 aaKnown RBP11.09□□□□□ -0.63
TRA2B-212ENST00000480461 HCRTR2O43614 444 aa11.09□□□□□ -0.63
TRA2B-212ENST00000480461 EFNA2O43921 213 aa11.09□□□□□ -0.63
TRA2B-212ENST00000480461 TRAPPC6AO75865 159 aa11.09□□□□□ -0.63
TRA2B-212ENST00000480461 CSTAP01040 98 aa11.09□□□□□ -0.63
TRA2B-212ENST00000480461 CRYABP02511 175 aaKnown RBP11.09□□□□□ -0.63
TRA2B-212ENST00000480461 OPN1SWP03999 348 aa11.09□□□□□ -0.63
TRA2B-212ENST00000480461 HPNP05981 417 aa11.09□□□□□ -0.63
TRA2B-212ENST00000480461 DBIP07108 87 aaKnown RBP11.09□□□□□ -0.63
TRA2B-212ENST00000480461 PABPC4LP0CB38 370 aaKnown RBP11.09□□□□□ -0.63
TRA2B-212ENST00000480461 UBTFL6P0CB48 400 aaPredicted RBP11.09□□□□□ -0.63
TRA2B-212ENST00000480461 NCK1P16333 377 aa11.09□□□□□ -0.63
TRA2B-212ENST00000480461 IL7RP16871 459 aa11.09□□□□□ -0.63
TRA2B-212ENST00000480461 CD247P20963 164 aa11.09□□□□□ -0.63
TRA2B-212ENST00000480461 ENDOUP21128 410 aaKnown RBP11.09□□□□□ -0.63
TRA2B-212ENST00000480461 ACAA2P42765 397 aaKnown RBP11.09□□□□□ -0.63
TRA2B-212ENST00000480461 HPCAP84074 193 aa11.09□□□□□ -0.63
TRA2B-212ENST00000480461 VEZF1Q14119 521 aa11.09□□□□□ -0.63
TRA2B-212ENST00000480461 TMEM44Q2T9K0 475 aa11.09□□□□□ -0.63
TRA2B-212ENST00000480461 ZNF311Q5JNZ3 666 aa11.09□□□□□ -0.63
TRA2B-212ENST00000480461 WIPI1Q5MNZ9 446 aaPredicted RBP11.09□□□□□ -0.63
TRA2B-212ENST00000480461 MRPL2Q5T653 305 aaKnown RBP11.09□□□□□ -0.63
TRA2B-212ENST00000480461 BNC2Q6ZN30 1099 aaPredicted RBP11.09□□□□□ -0.63
TRA2B-212ENST00000480461 EIF3MQ7L2H7 374 aaKnown RBP11.09□□□□□ -0.63
TRA2B-212ENST00000480461 ARPINQ7Z6K5 226 aa11.09□□□□□ -0.63
TRA2B-212ENST00000480461 SLC22A16Q86VW1 577 aa11.09□□□□□ -0.63
TRA2B-212ENST00000480461 PEX5LQ8IYB4 626 aa11.09□□□□□ -0.63
TRA2B-212ENST00000480461 FAM109AQ8N4B1 249 aa11.09□□□□□ -0.63
TRA2B-212ENST00000480461 SMYD1Q8NB12 490 aa11.09□□□□□ -0.63
TRA2B-212ENST00000480461 FAM83FQ8NEG4 500 aaPredicted RBP11.09□□□□□ -0.63
TRA2B-212ENST00000480461 OR5M1Q8NGP8 315 aa11.09□□□□□ -0.63
TRA2B-212ENST00000480461 OR10Q1Q8NGQ4 319 aa11.09□□□□□ -0.63
TRA2B-212ENST00000480461 B4GALNT2Q8NHY0 566 aa11.09□□□□□ -0.63
TRA2B-212ENST00000480461 POC1BQ8TC44 478 aa11.09□□□□□ -0.63
TRA2B-212ENST00000480461 GPR119Q8TDV5 335 aa11.09□□□□□ -0.63
TRA2B-212ENST00000480461 C1GALT1C1Q96EU7 318 aa11.09□□□□□ -0.63
TRA2B-212ENST00000480461 CLPTM1LQ96KA5 538 aa11.09□□□□□ -0.63
TRA2B-212ENST00000480461 PRR14Q9BWN1 585 aa11.09□□□□□ -0.63
TRA2B-212ENST00000480461 SPATA9Q9BWV2 254 aa11.09□□□□□ -0.63
TRA2B-212ENST00000480461 LAT2Q9GZY6 243 aa11.09□□□□□ -0.63
TRA2B-212ENST00000480461 C1orf21Q9H246 121 aa11.09□□□□□ -0.63
TRA2B-212ENST00000480461 SLC6A15Q9H2J7 730 aa11.09□□□□□ -0.63
TRA2B-212ENST00000480461 ALG2Q9H553 416 aa11.09□□□□□ -0.63
TRA2B-212ENST00000480461 ACKR4Q9NPB9 350 aa11.09□□□□□ -0.63
TRA2B-212ENST00000480461 OLAHQ9NV23 265 aa11.09□□□□□ -0.63
TRA2B-212ENST00000480461 DNAJB12Q9NXW2 375 aaKnown RBP11.09□□□□□ -0.63
TRA2B-212ENST00000480461 TNFRSF10DQ9UBN6 386 aa11.09□□□□□ -0.63
TRA2B-212ENST00000480461 A0A1B0GVC2 190 aa11.08□□□□□ -0.64
TRA2B-212ENST00000480461 TMEM247A6NEH6 219 aa11.08□□□□□ -0.64
TRA2B-212ENST00000480461 AP3D1O14617 1153 aa11.08□□□□□ -0.64
TRA2B-212ENST00000480461 TFECO14948 347 aaPredicted RBP11.08□□□□□ -0.64
TRA2B-212ENST00000480461 FRS3O43559 492 aa11.08□□□□□ -0.64
TRA2B-212ENST00000480461 CDC40O60508 579 aaKnown RBP eCLIP11.08□□□□□ -0.64
TRA2B-212ENST00000480461 EIF4E2O60573 245 aaKnown RBP11.08□□□□□ -0.64
TRA2B-212ENST00000480461 TPST2O60704 377 aa11.08□□□□□ -0.64
TRA2B-212ENST00000480461 IGHG3P01860 377 aa11.08□□□□□ -0.64
TRA2B-212ENST00000480461 THBS1P07996 1170 aa11.08□□□□□ -0.64
TRA2B-212ENST00000480461 LINGO3P0C6S8 592 aa11.08□□□□□ -0.64
TRA2B-212ENST00000480461 GKN3PP0CG01 181 aa11.08□□□□□ -0.64
TRA2B-212ENST00000480461 UBL4AP11441 157 aa11.08□□□□□ -0.64
TRA2B-212ENST00000480461 HSD17B1P14061 328 aa11.08□□□□□ -0.64
TRA2B-212ENST00000480461 TCN1P20061 433 aaPredicted RBP11.08□□□□□ -0.64
TRA2B-212ENST00000480461 TCEA1P23193 301 aaKnown RBP11.08□□□□□ -0.64
TRA2B-212ENST00000480461 PSMA4P25789 261 aaKnown RBP11.08□□□□□ -0.64
TRA2B-212ENST00000480461 DPP4P27487 766 aa11.08□□□□□ -0.64
TRA2B-212ENST00000480461 GDF1P27539 372 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms