RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 PRICKLE3O43900 615 aaPredicted RBP5.14□□□□□ -1.59
USF3-202ENST00000478658 PCDH7O60245 1069 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 ADRA2CP18825 462 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 KIR3DL2P43630 455 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 CAV2P51636 162 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 LAMTOR4Q0VGL1 99 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 FUT2Q10981 343 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 ATP6AP1Q15904 470 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 NKPD1Q17RQ9 610 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 RTL10Q7L3V2 364 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 NRARPQ7Z6K4 114 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 CDC20BQ86Y33 519 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 ABRAQ8N0Z2 381 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 ANKRD52Q8NB46 1076 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 NUP37Q8NFH4 326 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 PHOSPHO1Q8TCT1 267 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 PEX13Q92968 403 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 ZNF764Q96H86 408 aaPredicted RBP5.14□□□□□ -1.59
USF3-202ENST00000478658 LRRC3Q9BY71 257 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 SPNS1Q9H2V7 528 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 IKZF5Q9H5V7 419 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 ESRP2Q9H6T0 727 aaKnown RBP5.14□□□□□ -1.59
USF3-202ENST00000478658 PRDM4Q9UKN5 801 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 RARRES3Q9UL19 164 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 TRAPPC4Q9Y296 219 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 ESPL1Q14674 2120 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 AQP8O94778 261 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 DDNO94850 711 aaPredicted RBP5.14□□□□□ -1.59
USF3-202ENST00000478658 NUDT3O95989 172 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 APEHP13798 732 aaKnown RBP5.14□□□□□ -1.59
USF3-202ENST00000478658 PBX2P40425 430 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 GABRA4P48169 554 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 CLCNKBP51801 687 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 HK3P52790 923 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 CAP1Q01518 475 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 OLIG3Q7RTU3 272 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 POGLUT1Q8NBL1 392 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 TCP10LQ8TDR4 215 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 NEIL1Q96FI4 390 aaPredicted RBP5.14□□□□□ -1.59
USF3-202ENST00000478658 THOC3Q96J01 351 aaKnown RBP5.14□□□□□ -1.59
USF3-202ENST00000478658 SRRQ9GZT4 340 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 RPS10P5Q9NQ39 176 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 TM7SF3Q9NS93 570 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.14□□□□□ -1.59
USF3-202ENST00000478658 FBXL4Q9UKA2 621 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 TSPAN16Q9UKR8 245 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 ZNF443Q9Y2A4 671 aaPredicted RBP5.14□□□□□ -1.59
USF3-202ENST00000478658 SPATA31A6Q5VVP1 1343 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 WNT9AO14904 365 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 UBE2L6O14933 153 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 DPM1O60762 260 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 KLK1P06870 262 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 PMCHP20382 165 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 MGAT1P26572 445 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 INCA1Q0VD86 236 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 ENDOGQ14249 297 aaKnown RBP5.14□□□□□ -1.59
USF3-202ENST00000478658 MFSD6LQ8IWD5 586 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 C4orf19Q8IY42 314 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 TMEM40Q8WWA1 233 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 PDCD1LG2Q9BQ51 273 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 SPANXDQ9BXN6 97 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 PITHD1Q9GZP4 211 aaPredicted RBP5.14□□□□□ -1.59
USF3-202ENST00000478658 FBXO34Q9NWN3 711 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 ZNF223Q9UK11 482 aaPredicted RBP5.14□□□□□ -1.59
USF3-202ENST00000478658 FOXJ3Q9UPW0 622 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 ZFP37Q9Y6Q3 630 aaPredicted RBP5.14□□□□□ -1.59
USF3-202ENST00000478658 MYADML2A6NDP7 307 aa5.13□□□□□ -1.59
USF3-202ENST00000478658 FAM227AF5H4B4 570 aa5.13□□□□□ -1.59
USF3-202ENST00000478658 ADAM12O43184 909 aa5.13□□□□□ -1.59
USF3-202ENST00000478658 NTSR1P30989 418 aa5.13□□□□□ -1.59
USF3-202ENST00000478658 KDELR2P33947 212 aa5.13□□□□□ -1.59
USF3-202ENST00000478658 ABCG1P45844 678 aa5.13□□□□□ -1.59
USF3-202ENST00000478658 HHEXQ03014 270 aa5.13□□□□□ -1.59
USF3-202ENST00000478658 SLAMF1Q13291 335 aa5.13□□□□□ -1.59
USF3-202ENST00000478658 WBP2NLQ6ICG8 309 aa5.13□□□□□ -1.59
USF3-202ENST00000478658 NLGN4XQ8N0W4 816 aa5.13□□□□□ -1.59
USF3-202ENST00000478658 PNPLA1Q8N8W4 532 aa5.13□□□□□ -1.59
USF3-202ENST00000478658 OR51T1Q8NGJ9 327 aa5.13□□□□□ -1.59
USF3-202ENST00000478658 OR13F1Q8NGS4 319 aa5.13□□□□□ -1.59
USF3-202ENST00000478658 GPR150Q8NGU9 434 aa5.13□□□□□ -1.59
USF3-202ENST00000478658 SLC2A14Q8TDB8 520 aa5.13□□□□□ -1.59
USF3-202ENST00000478658 SCRN2Q96FV2 425 aa5.13□□□□□ -1.59
USF3-202ENST00000478658 ACOT13Q9NPJ3 140 aa5.13□□□□□ -1.59
USF3-202ENST00000478658 EIF2B3Q9NR50 452 aaKnown RBP5.13□□□□□ -1.59
USF3-202ENST00000478658 PNPOQ9NVS9 261 aa5.13□□□□□ -1.59
USF3-202ENST00000478658 PPRC1Q5VV67 1664 aaKnown RBP5.13□□□□□ -1.59
USF3-202ENST00000478658 NCKAP5O14513 1909 aa5.13□□□□□ -1.59
USF3-202ENST00000478658 TMEM2Q9UHN6 1383 aa5.13□□□□□ -1.59
USF3-202ENST00000478658 ZNF732B4DXR9 585 aa5.13□□□□□ -1.59
USF3-202ENST00000478658 NDUFS4O43181 175 aa5.13□□□□□ -1.59
USF3-202ENST00000478658 HOXD3P31249 432 aaPredicted RBP5.13□□□□□ -1.59
USF3-202ENST00000478658 DDR1Q08345 913 aa5.13□□□□□ -1.59
USF3-202ENST00000478658 HNRNPDQ14103 355 aaKnown RBP5.13□□□□□ -1.59
USF3-202ENST00000478658 ADIPOQQ15848 244 aa5.13□□□□□ -1.59
USF3-202ENST00000478658 C17orf107Q6ZR85 190 aa5.13□□□□□ -1.59
USF3-202ENST00000478658 CUZD1Q86UP6 607 aa5.13□□□□□ -1.59
USF3-202ENST00000478658 SGMS1Q86VZ5 419 aa5.13□□□□□ -1.59
USF3-202ENST00000478658 PRELID3AQ96N28 172 aa5.13□□□□□ -1.59
USF3-202ENST00000478658 PRRX2Q99811 253 aa5.13□□□□□ -1.59
USF3-202ENST00000478658 TPK1Q9H3S4 243 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms