RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 PARP6Q2NL67 630 aa3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 ANKRD55Q3KP44 614 aa3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 TCHHL1Q5QJ38 904 aaPredicted RBP3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 LDLRAP1Q5SW96 308 aa3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 LINC00242Q5T6M2 205 aa3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 LCE3AQ5TA76 89 aa3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 DOK6Q6PKX4 331 aa3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 GPBP1Q86WP2 473 aa3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 PLA2G4DQ86XP0 818 aa3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 BLIDQ8IZY5 108 aa3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 PYROXD2Q8N2H3 581 aa3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 SAMD12Q8N8I0 201 aa3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 BEST4Q8NFU0 473 aa3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 FLVCR1-AS1Q8TAF5 88 aa3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 PIBF1Q8WXW3 757 aa3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 FCGR1BQ92637 280 aa3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 NTNG2Q96CW9 530 aa3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 TSGA13Q96PP4 275 aa3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 TSPAN18Q96SJ8 248 aa3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 RIT2Q99578 217 aa3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 CCDC28BQ9BUN5 200 aa3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 FICDQ9BVA6 458 aa3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 GPR174Q9BXC1 333 aa3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 TEKT3Q9BXF9 490 aa3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 ERVK-6Q9BXR3 956 aa3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 KRTAP4-3Q9BYR4 195 aa3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 LIME1Q9H400 295 aa3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 AZI2Q9H6S1 392 aa3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 JPT2Q9H910 190 aa3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 ACTR8Q9H981 624 aa3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 NRN1Q9NPD7 142 aa3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 ATXN10Q9UBB4 475 aa3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 EIF3KQ9UBQ5 218 aaKnown RBP3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 IKZF3Q9UKT9 509 aa3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 NAP1L2Q9ULW6 460 aaPredicted RBP3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 AUP1Q9Y679 476 aa3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 NOTCH2Q04721 2471 aa3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 ANAPC1Q9H1A4 1944 aa3.22□□□□□ -1.89
CDC42BPA-212ENST00000478573 ADGRA3Q8IWK6 1321 aa3.21□□□□□ -1.89
CDC42BPA-212ENST00000478573 MYO10Q9HD67 2058 aa3.21□□□□□ -1.89
CDC42BPA-212ENST00000478573 DOCK6Q96HP0 2047 aa3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 A0A087WZY1 265 aa3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 IGHV3-16A0A0C4DH30 117 aa3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 A0A1W2PPR1 153 aa3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 FBLL1A6NHQ2 334 aaKnown RBP3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 RSPH10B2B2RC85 870 aa3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 M0QZ92 97 aa3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 PDLIM1O00151 329 aa3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 TOM1L1O75674 476 aa3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 GJB5O95377 273 aa3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 ECDO95905 644 aaPredicted RBP3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 OAS1P00973 400 aaKnown RBP3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 KRT6BP04259 564 aa3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 HEXBP07686 556 aa3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 RSPH10BP0C881 870 aa3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 GATA2P23769 480 aaPredicted RBP3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 SPRP35270 261 aaPredicted RBP3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 MDH1P40925 334 aaKnown RBP3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 ETV5P41161 510 aa3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 KRT6CP48668 564 aa3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 GSK3BP49841 420 aa3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 ATP4BP51164 291 aa3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 POLR2FP61218 127 aaKnown RBP3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 DEFB103AP81534 67 aa3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 MRPS6P82932 125 aaKnown RBP3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 HMGN5P82970 282 aaKnown RBP3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 HSF2Q03933 536 aa3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 PAX8Q06710 450 aa3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 ITGB3BPQ13352 177 aaPredicted RBP3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 GPNMBQ14956 572 aa3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 CD226Q15762 336 aa3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 ZKSCAN8Q15776 578 aaPredicted RBP3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 PCK2Q16822 640 aa3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 HSP90AA5PQ58FG0 334 aa3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 DNAJC21Q5F1R6 531 aaKnown RBP3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 VWA2Q5GFL6 755 aa3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 TCTEX1D4Q5JR98 221 aa3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 LEG1Q6P5S2 330 aa3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 Q7L0L9 218 aa3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 DEFB128Q7Z7B8 93 aa3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 LUZP1Q86V48 1076 aa3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 CATSPER3Q86XQ3 398 aa3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 Q8N377 158 aa3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 ARFGAP2Q8N6H7 521 aa3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 C4orf32Q8N8J7 132 aa3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 DLX4Q92988 240 aaPredicted RBP3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 PINX1Q96BK5 328 aaKnown RBP3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 ZNF597Q96LX8 424 aa3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 GPA33Q99795 319 aa3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 LLPHQ9BRT6 129 aaKnown RBP3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 RBM24Q9BX46 236 aaKnown RBP3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 UPF3BQ9BZI7 483 aaKnown RBP3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 ALG9Q9H6U8 611 aa3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 ZNF302Q9NR11 478 aa3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 FAM120CQ9NX05 1096 aaKnown RBP3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 P2RX2Q9UBL9 471 aa3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 FZR1Q9UM11 496 aa3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 MGAT4AQ9UM21 535 aa3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 FOXJ3Q9UPW0 622 aa3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 FBXO7Q9Y3I1 522 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms