RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 TMEM185BQ9H7F4 350 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 HHATLQ9HCP6 504 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 A4GALTQ9NPC4 353 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 THUMPD1Q9NXG2 353 aaKnown RBP6.24□□□□□ -1.41
BRCA1-215ENST00000478531 CALML5Q9NZT1 146 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 FAM215AQ9Y5M1 114 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 ABCA12Q86UK0 2595 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 A0A087WZY1 265 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 AGAP5A6NIR3 686 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 KDM4EB2RXH2 506 aaPredicted RBP6.24□□□□□ -1.41
BRCA1-215ENST00000478531 E9PLN8 166 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 SLC22A2O15244 555 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 WDR1O75083 606 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 ACTL6AO96019 429 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 OPN1LWP04000 364 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 TFPTP0C1Z6 253 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 PEPDP12955 493 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 COX4I1P13073 169 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 AQP1P29972 269 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 RYKP34925 604 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 LHX2P50458 406 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 P2RX1P51575 399 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 B3GALT5-AS1P59052 145 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 KCNJ10P78508 379 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 ADORA2A-AS1P86434 159 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 PMPCAQ10713 525 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 CBFBQ13951 182 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 SCARB2Q14108 478 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 TOMM34Q15785 309 aaPredicted RBP6.24□□□□□ -1.41
BRCA1-215ENST00000478531 RUNDC3AQ59EK9 446 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 NHSL2Q5HYW2 709 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 MRPL2Q5T653 305 aaKnown RBP6.24□□□□□ -1.41
BRCA1-215ENST00000478531 C1orf185Q5T7R7 199 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 RTL6Q6ICC9 239 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 PPP4R4Q6NUP7 873 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 MTFR2Q6P444 385 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 POMZP3Q6PJE2 187 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 PLXDC2Q6UX71 529 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 B3GNT6Q6ZMB0 384 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 VRK2Q86Y07 508 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 TREML1Q86YW5 311 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 PM20D2Q8IYS1 436 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 TOR1AIP2Q8NFQ8 470 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 OR10Q1Q8NGQ4 319 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 OR52P1PQ8NH57 321 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 ZBTB8AQ96BR9 441 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 WDYHV1Q96HA8 205 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 TRIB1Q96RU8 372 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 VKORC1Q9BQB6 163 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 PRDM14Q9GZV8 571 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 SAP130Q9H0E3 1048 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.24□□□□□ -1.41
BRCA1-215ENST00000478531 ICAM5Q9UMF0 924 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 SLC35A3Q9Y2D2 325 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 MRPS18CQ9Y3D5 142 aaKnown RBP6.24□□□□□ -1.41
BRCA1-215ENST00000478531 ZNF337Q9Y3M9 751 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 LRBAP50851 2863 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 ANKHD1Q8IWZ3 2542 aaKnown RBP6.23□□□□□ -1.41
BRCA1-215ENST00000478531 DSPPQ9NZW4 1301 aa6.23□□□□□ -1.41
BRCA1-215ENST00000478531 H0YC42 278 aa6.23□□□□□ -1.41
BRCA1-215ENST00000478531 FXYD1O00168 92 aa6.23□□□□□ -1.41
BRCA1-215ENST00000478531 AIM2O14862 343 aa6.23□□□□□ -1.41
BRCA1-215ENST00000478531 EIF4E2O60573 245 aaKnown RBP6.23□□□□□ -1.41
BRCA1-215ENST00000478531 DBIP07108 87 aaKnown RBP6.23□□□□□ -1.41
BRCA1-215ENST00000478531 GUSBP08236 651 aa6.23□□□□□ -1.41
BRCA1-215ENST00000478531 ARAFP10398 606 aa6.23□□□□□ -1.41
BRCA1-215ENST00000478531 NID1P14543 1247 aa6.23□□□□□ -1.41
BRCA1-215ENST00000478531 GABRA1P14867 456 aa6.23□□□□□ -1.41
BRCA1-215ENST00000478531 ZNF17P17021 662 aa6.23□□□□□ -1.41
BRCA1-215ENST00000478531 RPS4Y1P22090 263 aaKnown RBP6.23□□□□□ -1.41
BRCA1-215ENST00000478531 ME2P23368 584 aa6.23□□□□□ -1.41
BRCA1-215ENST00000478531 SLC6A2P23975 617 aa6.23□□□□□ -1.41
BRCA1-215ENST00000478531 CHMP24386 653 aa6.23□□□□□ -1.41
BRCA1-215ENST00000478531 ADSLP30566 484 aaPredicted RBP6.23□□□□□ -1.41
BRCA1-215ENST00000478531 PGM1P36871 562 aa6.23□□□□□ -1.41
BRCA1-215ENST00000478531 TPD52P55327 224 aaPredicted RBP6.23□□□□□ -1.41
BRCA1-215ENST00000478531 SUMO3P55854 103 aaPredicted RBP6.23□□□□□ -1.41
BRCA1-215ENST00000478531 CLDN18P56856 261 aa6.23□□□□□ -1.41
BRCA1-215ENST00000478531 CLDN20P56880 219 aa6.23□□□□□ -1.41
BRCA1-215ENST00000478531 NUP107P57740 925 aa6.23□□□□□ -1.41
BRCA1-215ENST00000478531 CDK6Q00534 326 aa6.23□□□□□ -1.41
BRCA1-215ENST00000478531 QPRTQ15274 297 aa6.23□□□□□ -1.41
BRCA1-215ENST00000478531 ACSF3Q4G176 576 aaPredicted RBP6.23□□□□□ -1.41
BRCA1-215ENST00000478531 LIN52Q52LA3 116 aa6.23□□□□□ -1.41
BRCA1-215ENST00000478531 RABL3Q5HYI8 236 aa6.23□□□□□ -1.41
BRCA1-215ENST00000478531 COQ5Q5HYK3 327 aa6.23□□□□□ -1.41
BRCA1-215ENST00000478531 REEP3Q6NUK4 255 aa6.23□□□□□ -1.41
BRCA1-215ENST00000478531 ZNF836Q6ZNA1 936 aa6.23□□□□□ -1.41
BRCA1-215ENST00000478531 MRGPRGQ86SM5 289 aa6.23□□□□□ -1.41
BRCA1-215ENST00000478531 LSRQ86X29 649 aaPredicted RBP6.23□□□□□ -1.41
BRCA1-215ENST00000478531 PCYOX1LQ8NBM8 494 aa6.23□□□□□ -1.41
BRCA1-215ENST00000478531 ATP6V1C2Q8NEY4 427 aa6.23□□□□□ -1.41
BRCA1-215ENST00000478531 OR5W2Q8NH69 310 aa6.23□□□□□ -1.41
BRCA1-215ENST00000478531 OR10A6Q8NH74 314 aa6.23□□□□□ -1.41
BRCA1-215ENST00000478531 ZNF563Q8TA94 476 aa6.23□□□□□ -1.41
BRCA1-215ENST00000478531 BBS10Q8TAM1 723 aa6.23□□□□□ -1.41
BRCA1-215ENST00000478531 GPR119Q8TDV5 335 aa6.23□□□□□ -1.41
BRCA1-215ENST00000478531 ITLN2Q8WWU7 325 aaPredicted RBP6.23□□□□□ -1.41
BRCA1-215ENST00000478531 CNOT9Q92600 299 aaKnown RBP6.23□□□□□ -1.41
BRCA1-215ENST00000478531 LRRC58Q96CX6 371 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms