RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 PGRP06401 933 aa21.01■□□□□ 0.95
C9orf3-215ENST00000478473 ZNF474Q6S9Z5 364 aaPredicted RBP21.01■□□□□ 0.95
C9orf3-215ENST00000478473 FAM214BQ7L5A3 538 aa21.01■□□□□ 0.95
C9orf3-215ENST00000478473 OR5W2Q8NH69 310 aa21.01■□□□□ 0.95
C9orf3-215ENST00000478473 OR2V1Q8NHB1 315 aa21.01■□□□□ 0.95
C9orf3-215ENST00000478473 PIWIL2Q8TC59 973 aaKnown RBP21.01■□□□□ 0.95
C9orf3-215ENST00000478473 SMPDL3BQ92485 455 aa21.01■□□□□ 0.95
C9orf3-215ENST00000478473 NINJ1Q92982 152 aa21.01■□□□□ 0.95
C9orf3-215ENST00000478473 MRGPRX4Q96LA9 322 aa21.01■□□□□ 0.95
C9orf3-215ENST00000478473 GPATCH1Q9BRR8 931 aaKnown RBP21.01■□□□□ 0.95
C9orf3-215ENST00000478473 POLDIP3Q9BY77 421 aaKnown RBP21.01■□□□□ 0.95
C9orf3-215ENST00000478473 CLEC4MQ9H2X3 399 aaPredicted RBP21.01■□□□□ 0.95
C9orf3-215ENST00000478473 KIAA0513O60268 411 aa21■□□□□ 0.95
C9orf3-215ENST00000478473 CPSF4O95639 269 aaKnown RBP21■□□□□ 0.95
C9orf3-215ENST00000478473 IDO1P14902 403 aa21■□□□□ 0.95
C9orf3-215ENST00000478473 PRKCAP17252 672 aa21■□□□□ 0.95
C9orf3-215ENST00000478473 ME2P23368 584 aa21■□□□□ 0.95
C9orf3-215ENST00000478473 DNAJA1P31689 397 aaKnown RBP21■□□□□ 0.95
C9orf3-215ENST00000478473 EIF1AXP47813 144 aaKnown RBP21■□□□□ 0.95
C9orf3-215ENST00000478473 SLC6A8P48029 635 aa21■□□□□ 0.95
C9orf3-215ENST00000478473 CPA2P48052 419 aa21■□□□□ 0.95
C9orf3-215ENST00000478473 FUT5Q11128 374 aa21■□□□□ 0.95
C9orf3-215ENST00000478473 FOXF1Q12946 379 aa21■□□□□ 0.95
C9orf3-215ENST00000478473 SGCBQ16585 318 aa21■□□□□ 0.95
C9orf3-215ENST00000478473 PDCD4Q53EL6 469 aaKnown RBP21■□□□□ 0.95
C9orf3-215ENST00000478473 PDZK1Q5T2W1 519 aa21■□□□□ 0.95
C9orf3-215ENST00000478473 MAVSQ7Z434 540 aa21■□□□□ 0.95
C9orf3-215ENST00000478473 FAM71CQ8NEG0 241 aa21■□□□□ 0.95
C9orf3-215ENST00000478473 LINC01560Q8TB33 94 aa21■□□□□ 0.95
C9orf3-215ENST00000478473 ZNF524Q96C55 264 aa21■□□□□ 0.95
C9orf3-215ENST00000478473 GMPPAQ96IJ6 420 aaPredicted RBP21■□□□□ 0.95
C9orf3-215ENST00000478473 KLHL15Q96M94 604 aa21■□□□□ 0.95
C9orf3-215ENST00000478473 LAT2Q9GZY6 243 aa21■□□□□ 0.95
C9orf3-215ENST00000478473 GLRX2Q9NS18 164 aa21■□□□□ 0.95
C9orf3-215ENST00000478473 ELOVL5Q9NYP7 299 aa21■□□□□ 0.95
C9orf3-215ENST00000478473 MARCOQ9UEW3 520 aaPredicted RBP21■□□□□ 0.95
C9orf3-215ENST00000478473 F8P00451 2351 aa21■□□□□ 0.95
C9orf3-215ENST00000478473 HIVEP1P15822 2718 aa20.99■□□□□ 0.95
C9orf3-215ENST00000478473 GTPBP1O00178 669 aaKnown RBP20.99■□□□□ 0.95
C9orf3-215ENST00000478473 SS18L1O75177 396 aaPredicted RBP20.99■□□□□ 0.95
C9orf3-215ENST00000478473 OR12D1P0DN82 309 aa20.99■□□□□ 0.95
C9orf3-215ENST00000478473 UBL4AP11441 157 aa20.99■□□□□ 0.95
C9orf3-215ENST00000478473 CD79BP40259 229 aa20.99■□□□□ 0.95
C9orf3-215ENST00000478473 MAGEA8P43361 318 aa20.99■□□□□ 0.95
C9orf3-215ENST00000478473 SKP2Q13309 424 aa20.99■□□□□ 0.95
C9orf3-215ENST00000478473 PDSS1Q5T2R2 415 aa20.99■□□□□ 0.95
C9orf3-215ENST00000478473 TYW3Q6IPR3 259 aaKnown RBP20.99■□□□□ 0.95
C9orf3-215ENST00000478473 LILRA2Q8N149 483 aa20.99■□□□□ 0.95
C9orf3-215ENST00000478473 CNEP1R1Q8N9A8 125 aa20.99■□□□□ 0.95
C9orf3-215ENST00000478473 ZNF75CPQ92670 426 aaPredicted RBP20.99■□□□□ 0.95
C9orf3-215ENST00000478473 ARL8AQ96BM9 186 aa20.99■□□□□ 0.95
C9orf3-215ENST00000478473 SLC35A5Q9BS91 424 aa20.99■□□□□ 0.95
C9orf3-215ENST00000478473 SDR39U1Q9NRG7 319 aaPredicted RBP20.99■□□□□ 0.95
C9orf3-215ENST00000478473 PLSCR4Q9NRQ2 329 aa20.99■□□□□ 0.95
C9orf3-215ENST00000478473 MCTS1Q9ULC4 181 aaKnown RBP20.99■□□□□ 0.95
C9orf3-215ENST00000478473 TESMINQ9Y4I5 508 aa20.99■□□□□ 0.95
C9orf3-215ENST00000478473 AKAP6Q13023 2319 aa20.98■□□□□ 0.95
C9orf3-215ENST00000478473 GOLGA8QA0A0J9YX86 632 aa20.98■□□□□ 0.95
C9orf3-215ENST00000478473 CENPVL1A0A0U1RR11 272 aa20.98■□□□□ 0.95
C9orf3-215ENST00000478473 PRAMEF27A3QJZ7 478 aa20.98■□□□□ 0.95
C9orf3-215ENST00000478473 GOLGA8OA6NCC3 632 aa20.98■□□□□ 0.95
C9orf3-215ENST00000478473 GOLGA8NF8WBI6 632 aa20.98■□□□□ 0.95
C9orf3-215ENST00000478473 CXCL13O43927 109 aa20.98■□□□□ 0.95
C9orf3-215ENST00000478473 TOMM34Q15785 309 aaPredicted RBP20.98■□□□□ 0.95
C9orf3-215ENST00000478473 GSTA3Q16772 222 aa20.98■□□□□ 0.95
C9orf3-215ENST00000478473 ATAD3BQ5T9A4 648 aa20.98■□□□□ 0.95
C9orf3-215ENST00000478473 C16orf62Q7Z3J2 963 aa20.98■□□□□ 0.95
C9orf3-215ENST00000478473 CDC20BQ86Y33 519 aa20.98■□□□□ 0.95
C9orf3-215ENST00000478473 TRIML2Q8N7C3 387 aa20.98■□□□□ 0.95
C9orf3-215ENST00000478473 OR6K3Q8NGY3 331 aa20.98■□□□□ 0.95
C9orf3-215ENST00000478473 FBXO27Q8NI29 283 aa20.98■□□□□ 0.95
C9orf3-215ENST00000478473 XAGE5Q8WWM1 108 aa20.98■□□□□ 0.95
C9orf3-215ENST00000478473 ROPN1LQ96C74 230 aa20.98■□□□□ 0.95
C9orf3-215ENST00000478473 OR52E6Q96RD3 313 aa20.98■□□□□ 0.95
C9orf3-215ENST00000478473 MKLN1Q9UL63 735 aa20.98■□□□□ 0.95
C9orf3-215ENST00000478473 SH3D21A4FU49 640 aa20.97■□□□□ 0.95
C9orf3-215ENST00000478473 CCDC154A6NI56 674 aa20.97■□□□□ 0.95
C9orf3-215ENST00000478473 GJE1A6NN92 205 aa20.97■□□□□ 0.95
C9orf3-215ENST00000478473 HMGN4O00479 90 aa20.97■□□□□ 0.95
C9orf3-215ENST00000478473 IL6P05231 212 aa20.97■□□□□ 0.95
C9orf3-215ENST00000478473 KITP10721 976 aa20.97■□□□□ 0.95
C9orf3-215ENST00000478473 SHC1P29353 583 aa20.97■□□□□ 0.95
C9orf3-215ENST00000478473 MRPL19P49406 292 aaKnown RBP20.97■□□□□ 0.95
C9orf3-215ENST00000478473 KHKP50053 298 aa20.97■□□□□ 0.95
C9orf3-215ENST00000478473 FAM27E3Q08E93 113 aa20.97■□□□□ 0.95
C9orf3-215ENST00000478473 GPR68Q15743 365 aa20.97■□□□□ 0.95
C9orf3-215ENST00000478473 MAPK14Q16539 360 aa20.97■□□□□ 0.95
C9orf3-215ENST00000478473 NDUFAF6Q330K2 333 aa20.97■□□□□ 0.95
C9orf3-215ENST00000478473 SLC9B1Q4ZJI4 515 aa20.97■□□□□ 0.95
C9orf3-215ENST00000478473 HBMQ6B0K9 141 aa20.97■□□□□ 0.95
C9orf3-215ENST00000478473 FRRS1Q6ZNA5 592 aa20.97■□□□□ 0.95
C9orf3-215ENST00000478473 ST8SIA1Q92185 356 aa20.97■□□□□ 0.95
C9orf3-215ENST00000478473 OSTF1Q92882 214 aa20.97■□□□□ 0.95
C9orf3-215ENST00000478473 C7orf26Q96N11 449 aa20.97■□□□□ 0.95
C9orf3-215ENST00000478473 PANX1Q96RD7 426 aa20.97■□□□□ 0.95
C9orf3-215ENST00000478473 GP6Q9HCN6 339 aa20.97■□□□□ 0.95
C9orf3-215ENST00000478473 ZIM2Q9NZV7 527 aa20.97■□□□□ 0.95
C9orf3-215ENST00000478473 NDRG3Q9UGV2 375 aa20.97■□□□□ 0.95
C9orf3-215ENST00000478473 LIPT1Q9Y234 373 aa20.97■□□□□ 0.95
C9orf3-215ENST00000478473 WDR45Q9Y484 360 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms