RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 APOOQ9BUR5 198 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 PHF7Q9BWX1 381 aaPredicted RBP4.6□□□□□ -1.67
SF3B6-202ENST00000478050 TEX12Q9BXU0 123 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 RSPO3Q9BXY4 272 aaPredicted RBP4.6□□□□□ -1.67
SF3B6-202ENST00000478050 ACTRT3Q9BYD9 372 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 SLC17A9Q9BYT1 436 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 POLR2J2Q9GZM3 115 aaKnown RBP4.6□□□□□ -1.67
SF3B6-202ENST00000478050 SLC38A1Q9H2H9 487 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 XKR8Q9H6D3 395 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 RNF167Q9H6Y7 350 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 ZDHHC4Q9NPG8 344 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 KRCC1Q9NPI7 259 aaPredicted RBP4.6□□□□□ -1.67
SF3B6-202ENST00000478050 POLE4Q9NR33 117 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 MAN2C1Q9NTJ4 1040 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 MED17Q9NVC6 651 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 FBXL12Q9NXK8 326 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 TVP23BQ9NYZ1 205 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 PRR13Q9NZ81 148 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 TESQ9UGI8 421 aaKnown RBP4.6□□□□□ -1.67
SF3B6-202ENST00000478050 PHF11Q9UIL8 331 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 MOSPD1Q9UJG1 213 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 FBXW2Q9UKT8 454 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 KCNK6Q9Y257 313 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 GRIP1Q9Y3R0 1128 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 ATG4BQ9Y4P1 393 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 ZNF780BQ9Y6R6 833 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 CEP295Q9C0D2 2601 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 COL4A2P08572 1712 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 ARHGEF17Q96PE2 2063 aaPredicted RBP4.6□□□□□ -1.67
SF3B6-202ENST00000478050 C2CD3Q4AC94 2353 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 HECTD1Q9ULT8 2610 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 DMDP11532 3685 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 A0A087WUU8 490 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 TBC1D3KA0A087X1G2 549 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 TBC1D3FA6NER0 549 aaPredicted RBP4.59□□□□□ -1.67
SF3B6-202ENST00000478050 URADA6NGE7 173 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 GLOD5A6NK44 160 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 ISM1B1AKI9 464 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 C4orf51C9J302 202 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 SLC30A4O14863 429 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 PGRMC2O15173 223 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 PPM1DO15297 605 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 PROM1O43490 865 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 PRKYO43930 277 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 ANKRD17O75179 2603 aaKnown RBP4.59□□□□□ -1.67
SF3B6-202ENST00000478050 FRYLO94915 3013 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 KCNK2O95069 426 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 OR5F1O95221 314 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 EPPINO95925 133 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 DNTTP04053 509 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 ASGR2P07307 311 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 CHRM5P08912 532 aaPredicted RBP4.59□□□□□ -1.67
SF3B6-202ENST00000478050 HBQ1P09105 142 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 IFI6P09912 130 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 TSPAN19P0C672 248 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 GAAP10253 952 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 CKMT1AP12532 417 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 IFNGR1P15260 489 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 NAT1P18440 290 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 ZNF10P21506 573 aaPredicted RBP4.59□□□□□ -1.67
SF3B6-202ENST00000478050 FPR3P25089 353 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 GDI1P31150 447 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 TNFSF8P32971 234 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 GNALP38405 381 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 RPS19P39019 145 aaKnown RBP4.59□□□□□ -1.67
SF3B6-202ENST00000478050 SOX3P41225 446 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 MC3RP41968 323 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 SLC9A3P48764 834 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 MAN2A2P49641 1150 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 SEPHS1P49903 392 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 DGKEP52429 567 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 GAS1P54826 345 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 WNT4P56705 351 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 RGS8P57771 180 aaPredicted RBP4.59□□□□□ -1.67
SF3B6-202ENST00000478050 PSPHP78330 225 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 BNC1Q01954 994 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 TNFRSF17Q02223 184 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 DUSP2Q05923 314 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 SLC13A2Q13183 592 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 TPBGQ13641 420 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 GPR19Q15760 415 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 DECR1Q16698 335 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 FAM214AQ32MH5 1076 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 PLK5Q496M5 336 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 EIPR1Q53HC9 387 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 ATAT1Q5SQI0 421 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 C18orf63Q68DL7 685 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 TBC1D3GQ6DHY5 549 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 HEPHL1Q6MZM0 1159 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 ACSM5Q6NUN0 579 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 CDC73Q6P1J9 531 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 TMEM107Q6UX40 140 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 CCBE1Q6UXH8 406 aaPredicted RBP4.59□□□□□ -1.67
SF3B6-202ENST00000478050 TMPRSS11AQ6ZMR5 421 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 ZNF730Q6ZMV8 503 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 NCCRP1Q6ZVX7 275 aaPredicted RBP4.59□□□□□ -1.67
SF3B6-202ENST00000478050 PLEKHM3Q6ZWE6 761 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 USP30Q70CQ3 517 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 RRM2BQ7LG56 351 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 C16orf62Q7Z3J2 963 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms