RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 RAC3P60763 192 aa6.35□□□□□ -1.39
SPTLC1-205ENST00000477888 ATP6V0D1P61421 351 aa6.35□□□□□ -1.39
SPTLC1-205ENST00000477888 LMO4P61968 165 aa6.35□□□□□ -1.39
SPTLC1-205ENST00000477888 SLC25A3Q00325 362 aa6.35□□□□□ -1.39
SPTLC1-205ENST00000477888 POU4F1Q01851 419 aa6.35□□□□□ -1.39
SPTLC1-205ENST00000477888 DECR1Q16698 335 aa6.35□□□□□ -1.39
SPTLC1-205ENST00000477888 ERCC6LQ2NKX8 1250 aa6.35□□□□□ -1.39
SPTLC1-205ENST00000477888 TMEM176BQ3YBM2 270 aaPredicted RBP6.35□□□□□ -1.39
SPTLC1-205ENST00000477888 TTC27Q6P3X3 843 aa6.35□□□□□ -1.39
SPTLC1-205ENST00000477888 RHOUQ7L0Q8 258 aa6.35□□□□□ -1.39
SPTLC1-205ENST00000477888 SPATA19Q7Z5L4 167 aa6.35□□□□□ -1.39
SPTLC1-205ENST00000477888 GALNT5Q7Z7M9 940 aa6.35□□□□□ -1.39
SPTLC1-205ENST00000477888 CARM1Q86X55 608 aa6.35□□□□□ -1.39
SPTLC1-205ENST00000477888 RELL1Q8IUW5 271 aa6.35□□□□□ -1.39
SPTLC1-205ENST00000477888 ZNF100Q8IYN0 542 aa6.35□□□□□ -1.39
SPTLC1-205ENST00000477888 METTL4Q8N3J2 472 aa6.35□□□□□ -1.39
SPTLC1-205ENST00000477888 TEX9Q8N6V9 391 aa6.35□□□□□ -1.39
SPTLC1-205ENST00000477888 L3MBTL4Q8NA19 623 aa6.35□□□□□ -1.39
SPTLC1-205ENST00000477888 OR51F2Q8NH61 342 aa6.35□□□□□ -1.39
SPTLC1-205ENST00000477888 NANPQ8TBE9 248 aa6.35□□□□□ -1.39
SPTLC1-205ENST00000477888 C22orf15Q8WYQ4 148 aa6.35□□□□□ -1.39
SPTLC1-205ENST00000477888 DVL3Q92997 716 aaPredicted RBP6.35□□□□□ -1.39
SPTLC1-205ENST00000477888 KCTD12Q96CX2 325 aaKnown RBP6.35□□□□□ -1.39
SPTLC1-205ENST00000477888 C1orf147Q96MC9 270 aaPredicted RBP6.35□□□□□ -1.39
SPTLC1-205ENST00000477888 DOK1Q99704 481 aa6.35□□□□□ -1.39
SPTLC1-205ENST00000477888 MRPL1Q9BYD6 325 aaKnown RBP6.35□□□□□ -1.39
SPTLC1-205ENST00000477888 TMPRSS13Q9BYE2 586 aa6.35□□□□□ -1.39
SPTLC1-205ENST00000477888 TAS2R16Q9NYV7 291 aa6.35□□□□□ -1.39
SPTLC1-205ENST00000477888 TREM2Q9NZC2 230 aa6.35□□□□□ -1.39
SPTLC1-205ENST00000477888 AHSPQ9NZD4 102 aa6.35□□□□□ -1.39
SPTLC1-205ENST00000477888 OPTCQ9UBM4 332 aa6.35□□□□□ -1.39
SPTLC1-205ENST00000477888 MCM8Q9UJA3 840 aa6.35□□□□□ -1.39
SPTLC1-205ENST00000477888 ACOT9Q9Y305 439 aa6.35□□□□□ -1.39
SPTLC1-205ENST00000477888 RNF11Q9Y3C5 154 aa6.35□□□□□ -1.39
SPTLC1-205ENST00000477888 GOLGA6L22H0YM25 854 aa6.34□□□□□ -1.39
SPTLC1-205ENST00000477888 ZNF195O14628 629 aa6.34□□□□□ -1.39
SPTLC1-205ENST00000477888 WNT9BO14905 357 aa6.34□□□□□ -1.39
SPTLC1-205ENST00000477888 FSHBP01225 129 aa6.34□□□□□ -1.39
SPTLC1-205ENST00000477888 IGKV1D-16P01601 117 aa6.34□□□□□ -1.39
SPTLC1-205ENST00000477888 TFP02787 698 aa6.34□□□□□ -1.39
SPTLC1-205ENST00000477888 S100BP04271 92 aaPredicted RBP6.34□□□□□ -1.39
SPTLC1-205ENST00000477888 ITGA5P08648 1049 aa6.34□□□□□ -1.39
SPTLC1-205ENST00000477888 ADRA2CP18825 462 aa6.34□□□□□ -1.39
SPTLC1-205ENST00000477888 MDKP21741 143 aaPredicted RBP6.34□□□□□ -1.39
SPTLC1-205ENST00000477888 FPR2P25090 351 aa6.34□□□□□ -1.39
SPTLC1-205ENST00000477888 ELK4P28324 431 aa6.34□□□□□ -1.39
SPTLC1-205ENST00000477888 GP5P40197 560 aa6.34□□□□□ -1.39
SPTLC1-205ENST00000477888 EIF1P41567 113 aaKnown RBP6.34□□□□□ -1.39
SPTLC1-205ENST00000477888 PIK3CGP48736 1102 aa6.34□□□□□ -1.39
SPTLC1-205ENST00000477888 ZNF41P51814 821 aaPredicted RBP6.34□□□□□ -1.39
SPTLC1-205ENST00000477888 SLC18A2Q05940 514 aa6.34□□□□□ -1.39
SPTLC1-205ENST00000477888 GALNT1Q10472 559 aaPredicted RBP6.34□□□□□ -1.39
SPTLC1-205ENST00000477888 FRG1Q14331 258 aaKnown RBP6.34□□□□□ -1.39
SPTLC1-205ENST00000477888 GRAMD1BQ3KR37 738 aa6.34□□□□□ -1.39
SPTLC1-205ENST00000477888 C1QTNF12Q5T7M4 302 aa6.34□□□□□ -1.39
SPTLC1-205ENST00000477888 RNASEH2BQ5TBB1 312 aaKnown RBP6.34□□□□□ -1.39
SPTLC1-205ENST00000477888 STEAP4Q687X5 459 aa6.34□□□□□ -1.39
SPTLC1-205ENST00000477888 PAGE2Q7Z2X7 111 aa6.34□□□□□ -1.39
SPTLC1-205ENST00000477888 ISCA2Q86U28 154 aa6.34□□□□□ -1.39
SPTLC1-205ENST00000477888 UBE2J2Q8N2K1 259 aa6.34□□□□□ -1.39
SPTLC1-205ENST00000477888 OR4C3Q8NH37 302 aa6.34□□□□□ -1.39
SPTLC1-205ENST00000477888 MAIP1Q8WWC4 291 aa6.34□□□□□ -1.39
SPTLC1-205ENST00000477888 MRGPRX4Q96LA9 322 aa6.34□□□□□ -1.39
SPTLC1-205ENST00000477888 DUX5Q96PT3 197 aa6.34□□□□□ -1.39
SPTLC1-205ENST00000477888 HHATLQ9HCP6 504 aa6.34□□□□□ -1.39
SPTLC1-205ENST00000477888 SLC52A3Q9NQ40 469 aa6.34□□□□□ -1.39
SPTLC1-205ENST00000477888 ASB6Q9NWX5 421 aa6.34□□□□□ -1.39
SPTLC1-205ENST00000477888 NUDT4Q9NZJ9 180 aa6.34□□□□□ -1.39
SPTLC1-205ENST00000477888 MALT1Q9UDY8 824 aa6.34□□□□□ -1.39
SPTLC1-205ENST00000477888 FBXO9Q9UK97 447 aaPredicted RBP6.34□□□□□ -1.39
SPTLC1-205ENST00000477888 MRTO4Q9UKD2 239 aaKnown RBP6.34□□□□□ -1.39
SPTLC1-205ENST00000477888 UTS2RQ9UKP6 389 aa6.34□□□□□ -1.39
SPTLC1-205ENST00000477888 MMP24Q9Y5R2 645 aa6.34□□□□□ -1.39
SPTLC1-205ENST00000477888 BIRC6Q9NR09 4857 aa6.34□□□□□ -1.39
SPTLC1-205ENST00000477888 IGKV3D-15A0A087WSY6 115 aa6.33□□□□□ -1.4
SPTLC1-205ENST00000477888 TMEM129A0AVI4 362 aa6.33□□□□□ -1.4
SPTLC1-205ENST00000477888 DNAJC9-AS1A6NH13 148 aa6.33□□□□□ -1.4
SPTLC1-205ENST00000477888 GJE1A6NN92 205 aa6.33□□□□□ -1.4
SPTLC1-205ENST00000477888 PRSS23O95084 383 aa6.33□□□□□ -1.4
SPTLC1-205ENST00000477888 PSMG1O95456 288 aa6.33□□□□□ -1.4
SPTLC1-205ENST00000477888 RNASE1P07998 156 aaKnown RBP6.33□□□□□ -1.4
SPTLC1-205ENST00000477888 NGFRP08138 427 aa6.33□□□□□ -1.4
SPTLC1-205ENST00000477888 LTA4HP09960 611 aaKnown RBP6.33□□□□□ -1.4
SPTLC1-205ENST00000477888 MTHFD2P13995 350 aa6.33□□□□□ -1.4
SPTLC1-205ENST00000477888 RFX3P48380 749 aa6.33□□□□□ -1.4
SPTLC1-205ENST00000477888 ALDH9A1P49189 494 aa6.33□□□□□ -1.4
SPTLC1-205ENST00000477888 PSMD4P55036 377 aaKnown RBP6.33□□□□□ -1.4
SPTLC1-205ENST00000477888 FOXF1Q12946 379 aa6.33□□□□□ -1.4
SPTLC1-205ENST00000477888 TRADDQ15628 312 aa6.33□□□□□ -1.4
SPTLC1-205ENST00000477888 ZNHIT3Q15649 155 aaPredicted RBP6.33□□□□□ -1.4
SPTLC1-205ENST00000477888 LEG1Q6P5S2 330 aa6.33□□□□□ -1.4
SPTLC1-205ENST00000477888 DOK3Q7L591 496 aa6.33□□□□□ -1.4
SPTLC1-205ENST00000477888 COMMD6Q7Z4G1 85 aa6.33□□□□□ -1.4
SPTLC1-205ENST00000477888 PPIL6Q8IXY8 311 aa6.33□□□□□ -1.4
SPTLC1-205ENST00000477888 C17orf78Q8N4C9 275 aa6.33□□□□□ -1.4
SPTLC1-205ENST00000477888 SIGLECL1Q8N7X8 197 aa6.33□□□□□ -1.4
SPTLC1-205ENST00000477888 STAG3L4Q8TBR4 150 aa6.33□□□□□ -1.4
SPTLC1-205ENST00000477888 ZFP90Q8TF47 636 aa6.33□□□□□ -1.4
SPTLC1-205ENST00000477888 EXT2Q93063 718 aa6.33□□□□□ -1.4
SPTLC1-205ENST00000477888 APH1AQ96BI3 265 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms