RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 FAR1Q8WVX9 515 aa18.12■□□□□ 0.49
ACTB-210ENST00000477812 NR4A3Q92570 626 aa18.12■□□□□ 0.49
ACTB-210ENST00000477812 SLC35B4Q969S0 331 aa18.12■□□□□ 0.49
ACTB-210ENST00000477812 SLX1AQ9BQ83 275 aa18.12■□□□□ 0.49
ACTB-210ENST00000477812 WFDC6Q9BQY6 131 aa18.12■□□□□ 0.49
ACTB-210ENST00000477812 OR2B2Q9GZK3 357 aa18.12■□□□□ 0.49
ACTB-210ENST00000477812 GORASP2Q9H8Y8 452 aa18.12■□□□□ 0.49
ACTB-210ENST00000477812 CACYBPQ9HB71 228 aaKnown RBP18.12■□□□□ 0.49
ACTB-210ENST00000477812 MAGEL2Q9UJ55 1249 aa18.12■□□□□ 0.49
ACTB-210ENST00000477812 TFECO14948 347 aaPredicted RBP18.11■□□□□ 0.49
ACTB-210ENST00000477812 SUV39H1O43463 412 aa18.11■□□□□ 0.49
ACTB-210ENST00000477812 GMFGO60234 142 aa18.11■□□□□ 0.49
ACTB-210ENST00000477812 ZIC3O60481 467 aa18.11■□□□□ 0.49
ACTB-210ENST00000477812 LGI1O95970 557 aa18.11■□□□□ 0.49
ACTB-210ENST00000477812 PRB1P04280 392 aa18.11■□□□□ 0.49
ACTB-210ENST00000477812 PRG2P13727 222 aa18.11■□□□□ 0.49
ACTB-210ENST00000477812 ME2P23368 584 aa18.11■□□□□ 0.49
ACTB-210ENST00000477812 GDF1P27539 372 aa18.11■□□□□ 0.49
ACTB-210ENST00000477812 SRD5A2P31213 254 aa18.11■□□□□ 0.49
ACTB-210ENST00000477812 TDGF1P3P51864 188 aa18.11■□□□□ 0.49
ACTB-210ENST00000477812 MS4A2Q01362 244 aa18.11■□□□□ 0.49
ACTB-210ENST00000477812 ALDH6A1Q02252 535 aaKnown RBP18.11■□□□□ 0.49
ACTB-210ENST00000477812 GANABQ14697 944 aaKnown RBP18.11■□□□□ 0.49
ACTB-210ENST00000477812 TMEM44Q2T9K0 475 aa18.11■□□□□ 0.49
ACTB-210ENST00000477812 EIPR1Q53HC9 387 aa18.11■□□□□ 0.49
ACTB-210ENST00000477812 GLYATQ6IB77 296 aa18.11■□□□□ 0.49
ACTB-210ENST00000477812 ARSKQ6UWY0 536 aa18.11■□□□□ 0.49
ACTB-210ENST00000477812 YTHDF3Q7Z739 585 aaKnown RBP18.11■□□□□ 0.49
ACTB-210ENST00000477812 ZNF843Q8N446 348 aa18.11■□□□□ 0.49
ACTB-210ENST00000477812 TSPAN10Q9H1Z9 355 aaPredicted RBP18.11■□□□□ 0.49
ACTB-210ENST00000477812 PLSCR2Q9NRY7 297 aa18.11■□□□□ 0.49
ACTB-210ENST00000477812 MED17Q9NVC6 651 aa18.11■□□□□ 0.49
ACTB-210ENST00000477812 ASF1BQ9NVP2 202 aa18.11■□□□□ 0.49
ACTB-210ENST00000477812 MRPS18CQ9Y3D5 142 aaKnown RBP18.11■□□□□ 0.49
ACTB-210ENST00000477812 TTLL8A6PVC2 850 aa18.1■□□□□ 0.49
ACTB-210ENST00000477812 ETV2O00321 342 aaPredicted RBP18.1■□□□□ 0.49
ACTB-210ENST00000477812 AP3D1O14617 1153 aa18.1■□□□□ 0.49
ACTB-210ENST00000477812 ACOT8O14734 319 aa18.1■□□□□ 0.49
ACTB-210ENST00000477812 FRS3O43559 492 aa18.1■□□□□ 0.49
ACTB-210ENST00000477812 IFNA14P01570 189 aa18.1■□□□□ 0.49
ACTB-210ENST00000477812 IGHG3P01860 377 aa18.1■□□□□ 0.49
ACTB-210ENST00000477812 C8BP07358 591 aa18.1■□□□□ 0.49
ACTB-210ENST00000477812 LINGO3P0C6S8 592 aa18.1■□□□□ 0.49
ACTB-210ENST00000477812 ATP6V1B2P21281 511 aa18.1■□□□□ 0.49
ACTB-210ENST00000477812 DPP4P27487 766 aa18.1■□□□□ 0.49
ACTB-210ENST00000477812 ACAA2P42765 397 aaKnown RBP18.1■□□□□ 0.49
ACTB-210ENST00000477812 ZNF136P52737 540 aa18.1■□□□□ 0.49
ACTB-210ENST00000477812 DSCR4P56555 118 aaPredicted RBP18.1■□□□□ 0.49
ACTB-210ENST00000477812 EPS8Q12929 822 aa18.1■□□□□ 0.49
ACTB-210ENST00000477812 TRIM25Q14258 630 aaKnown RBP18.1■□□□□ 0.49
ACTB-210ENST00000477812 TOMM34Q15785 309 aaPredicted RBP18.1■□□□□ 0.49
ACTB-210ENST00000477812 NRF1Q16656 503 aa18.1■□□□□ 0.49
ACTB-210ENST00000477812 PLPPR5Q32ZL2 321 aa18.1■□□□□ 0.49
ACTB-210ENST00000477812 CBLL1Q75N03 491 aa18.1■□□□□ 0.49
ACTB-210ENST00000477812 ZNF440Q8IYI8 595 aa18.1■□□□□ 0.49
ACTB-210ENST00000477812 ULK2Q8IYT8 1036 aa18.1■□□□□ 0.49
ACTB-210ENST00000477812 TMCO5AQ8N6Q1 288 aa18.1■□□□□ 0.49
ACTB-210ENST00000477812 FAM83FQ8NEG4 500 aaPredicted RBP18.1■□□□□ 0.49
ACTB-210ENST00000477812 OR52E4Q8NGH9 312 aa18.1■□□□□ 0.49
ACTB-210ENST00000477812 GPR119Q8TDV5 335 aa18.1■□□□□ 0.49
ACTB-210ENST00000477812 RASSF5Q8WWW0 418 aa18.1■□□□□ 0.49
ACTB-210ENST00000477812 CCDC124Q96CT7 223 aaKnown RBP18.1■□□□□ 0.49
ACTB-210ENST00000477812 ASB9Q96DX5 294 aa18.1■□□□□ 0.49
ACTB-210ENST00000477812 RNF145Q96MT1 663 aa18.1■□□□□ 0.49
ACTB-210ENST00000477812 ARHGDIGQ99819 225 aa18.1■□□□□ 0.49
ACTB-210ENST00000477812 MUC13Q9H3R2 512 aa18.1■□□□□ 0.49
ACTB-210ENST00000477812 ARMC7Q9H6L4 198 aa18.1■□□□□ 0.49
ACTB-210ENST00000477812 PTGES2Q9H7Z7 377 aa18.1■□□□□ 0.49
ACTB-210ENST00000477812 ACKR4Q9NPB9 350 aa18.1■□□□□ 0.49
ACTB-210ENST00000477812 OLAHQ9NV23 265 aa18.1■□□□□ 0.49
ACTB-210ENST00000477812 ACTR3BQ9P1U1 418 aa18.1■□□□□ 0.49
ACTB-210ENST00000477812 RALYQ9UKM9 306 aaKnown RBP18.1■□□□□ 0.49
ACTB-210ENST00000477812 LIPGQ9Y5X9 500 aa18.1■□□□□ 0.49
ACTB-210ENST00000477812 SHANK1Q9Y566 2161 aa18.09■□□□□ 0.49
ACTB-210ENST00000477812 C7orf72A4D263 438 aa18.09■□□□□ 0.49
ACTB-210ENST00000477812 NPIPA5E9PKD4 350 aa18.09■□□□□ 0.49
ACTB-210ENST00000477812 FAAHO00519 579 aa18.09■□□□□ 0.49
ACTB-210ENST00000477812 CYP7B1O75881 506 aa18.09■□□□□ 0.49
ACTB-210ENST00000477812 WISP1O95388 367 aa18.09■□□□□ 0.49
ACTB-210ENST00000477812 NTN1O95631 604 aa18.09■□□□□ 0.49
ACTB-210ENST00000477812 SERPINA1P01009 418 aa18.09■□□□□ 0.49
ACTB-210ENST00000477812 FESP07332 822 aa18.09■□□□□ 0.49
ACTB-210ENST00000477812 GKN3PP0CG01 181 aa18.09■□□□□ 0.49
ACTB-210ENST00000477812 SLC6A8P48029 635 aa18.09■□□□□ 0.49
ACTB-210ENST00000477812 MLLT10P55197 1068 aa18.09■□□□□ 0.49
ACTB-210ENST00000477812 DLX5P56178 289 aa18.09■□□□□ 0.49
ACTB-210ENST00000477812 B3GALT5-AS1P59052 145 aa18.09■□□□□ 0.49
ACTB-210ENST00000477812 SELENOWP63302 87 aa18.09■□□□□ 0.49
ACTB-210ENST00000477812 FOXK1P85037 733 aa18.09■□□□□ 0.49
ACTB-210ENST00000477812 CBFBQ13951 182 aa18.09■□□□□ 0.49
ACTB-210ENST00000477812 LCN8Q6JVE9 175 aa18.09■□□□□ 0.49
ACTB-210ENST00000477812 OR4D11Q8NGI4 311 aa18.09■□□□□ 0.49
ACTB-210ENST00000477812 FAM162AQ96A26 154 aa18.09■□□□□ 0.49
ACTB-210ENST00000477812 NPAS1Q99742 590 aa18.09■□□□□ 0.49
ACTB-210ENST00000477812 DCAF13Q9NV06 445 aaKnown RBP18.09■□□□□ 0.49
ACTB-210ENST00000477812 NPIPA1Q9UND3 350 aa18.09■□□□□ 0.49
ACTB-210ENST00000477812 ZNF407Q9C0G0 2248 aa18.08■□□□□ 0.49
ACTB-210ENST00000477812 A0A087WZY1 265 aa18.08■□□□□ 0.48
ACTB-210ENST00000477812 CFAP73A6NFT4 308 aa18.08■□□□□ 0.48
ACTB-210ENST00000477812 CDC40O60508 579 aaKnown RBP eCLIP18.08■□□□□ 0.489e-7■■■□□ 18.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms