RNA–Protein interactions for RNA: ENST00000477548.5

DFFB-209, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,923 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-209ENST00000477548 GLDNQ6ZMI3 551 aaPredicted RBP12.52□□□□□ -0.41
DFFB-209ENST00000477548 SYT9Q86SS6 491 aa12.52□□□□□ -0.41
DFFB-209ENST00000477548 MCATQ8IVS2 390 aaKnown RBP12.52□□□□□ -0.41
DFFB-209ENST00000477548 OR6V1Q8N148 313 aa12.52□□□□□ -0.41
DFFB-209ENST00000477548 PIGXQ8TBF5 258 aa12.52□□□□□ -0.41
DFFB-209ENST00000477548 HAVCR2Q8TDQ0 301 aa12.52□□□□□ -0.41
DFFB-209ENST00000477548 KAT2AQ92830 837 aa12.52□□□□□ -0.41
DFFB-209ENST00000477548 GCDHQ92947 438 aaPredicted RBP12.52□□□□□ -0.41
DFFB-209ENST00000477548 EXOSC8Q96B26 276 aaKnown RBP12.52□□□□□ -0.41
DFFB-209ENST00000477548 LYSMD1Q96S90 227 aa12.52□□□□□ -0.41
DFFB-209ENST00000477548 GPN1Q9HCN4 374 aaPredicted RBP12.52□□□□□ -0.41
DFFB-209ENST00000477548 HINT3Q9NQE9 182 aaKnown RBP12.52□□□□□ -0.41
DFFB-209ENST00000477548 PURGQ9UJV8 347 aaKnown RBP12.52□□□□□ -0.41
DFFB-209ENST00000477548 A0A1B0GW55 424 aa12.51□□□□□ -0.41
DFFB-209ENST00000477548 CPSF4LA6NMK7 179 aaKnown RBP12.51□□□□□ -0.41
DFFB-209ENST00000477548 GSTZ1O43708 216 aaPredicted RBP12.51□□□□□ -0.41
DFFB-209ENST00000477548 ZNF821O75541 412 aaPredicted RBP12.51□□□□□ -0.41
DFFB-209ENST00000477548 SPDEFO95238 335 aa12.51□□□□□ -0.41
DFFB-209ENST00000477548 DUX4L2P0CJ85 424 aa12.51□□□□□ -0.41
DFFB-209ENST00000477548 DUX4L3P0CJ86 424 aa12.51□□□□□ -0.41
DFFB-209ENST00000477548 DUX4L4P0CJ87 422 aa12.51□□□□□ -0.41
DFFB-209ENST00000477548 DUX4L5P0CJ88 424 aa12.51□□□□□ -0.41
DFFB-209ENST00000477548 DUX4L6P0CJ89 424 aa12.51□□□□□ -0.41
DFFB-209ENST00000477548 DUX4L7P0CJ90 424 aa12.51□□□□□ -0.41
DFFB-209ENST00000477548 TYRP14679 529 aa12.51□□□□□ -0.41
DFFB-209ENST00000477548 ATF1P18846 271 aa12.51□□□□□ -0.41
DFFB-209ENST00000477548 ANXA7P20073 488 aaKnown RBP12.51□□□□□ -0.41
DFFB-209ENST00000477548 AHRP35869 848 aa12.51□□□□□ -0.41
DFFB-209ENST00000477548 GPR4P46093 362 aa12.51□□□□□ -0.41
DFFB-209ENST00000477548 PLBD1Q6P4A8 553 aa12.51□□□□□ -0.41
DFFB-209ENST00000477548 BAIAP2L2Q6UXY1 529 aa12.51□□□□□ -0.41
DFFB-209ENST00000477548 FAM98AQ8NCA5 519 aaKnown RBP12.51□□□□□ -0.41
DFFB-209ENST00000477548 ZNF740Q8NDX6 193 aa12.51□□□□□ -0.41
DFFB-209ENST00000477548 CD99L2Q8TCZ2 262 aa12.51□□□□□ -0.41
DFFB-209ENST00000477548 SCAMP4Q969E2 229 aa12.51□□□□□ -0.41
DFFB-209ENST00000477548 NANSQ9NR45 359 aa12.51□□□□□ -0.41
DFFB-209ENST00000477548 DUX4Q9UBX2 424 aa12.51□□□□□ -0.41
DFFB-209ENST00000477548 MRTO4Q9UKD2 239 aaKnown RBP12.51□□□□□ -0.41
DFFB-209ENST00000477548 PLCL2Q9UPR0 1127 aa12.51□□□□□ -0.41
DFFB-209ENST00000477548 NPFFR2Q9Y5X5 522 aa12.51□□□□□ -0.41
DFFB-209ENST00000477548 TSPAN6O43657 245 aa12.51□□□□□ -0.41
DFFB-209ENST00000477548 SSX5O60225 188 aa12.51□□□□□ -0.41
DFFB-209ENST00000477548 KHDRBS3O75525 346 aaKnown RBP12.51□□□□□ -0.41
DFFB-209ENST00000477548 STX11O75558 287 aa12.51□□□□□ -0.41
DFFB-209ENST00000477548 ITGA10O75578 1167 aa12.51□□□□□ -0.41
DFFB-209ENST00000477548 HIST1H2ABP04908 130 aa12.51□□□□□ -0.41
DFFB-209ENST00000477548 SAGP10523 405 aaPredicted RBP12.51□□□□□ -0.41
DFFB-209ENST00000477548 PBLDP30039 288 aaPredicted RBP12.51□□□□□ -0.41
DFFB-209ENST00000477548 SPINT3P49223 89 aa12.51□□□□□ -0.41
DFFB-209ENST00000477548 ACSM3Q53FZ2 586 aa12.51□□□□□ -0.41
DFFB-209ENST00000477548 PIP5KL1Q5T9C9 394 aa12.51□□□□□ -0.41
DFFB-209ENST00000477548 ZNF613Q6PF04 617 aa12.51□□□□□ -0.41
DFFB-209ENST00000477548 APOOLQ6UXV4 268 aa12.51□□□□□ -0.41
DFFB-209ENST00000477548 HIST3H2AQ7L7L0 130 aa12.51□□□□□ -0.41
DFFB-209ENST00000477548 TMEM173Q86WV6 379 aaPredicted RBP12.51□□□□□ -0.41
DFFB-209ENST00000477548 CDH26Q8IXH8 852 aa12.51□□□□□ -0.41
DFFB-209ENST00000477548 CCDC36Q8IYA8 594 aa12.51□□□□□ -0.41
DFFB-209ENST00000477548 OR5M9Q8NGP3 310 aa12.51□□□□□ -0.41
DFFB-209ENST00000477548 ZNF480Q8WV37 535 aa12.51□□□□□ -0.41
DFFB-209ENST00000477548 HIST1H2ACQ93077 130 aa12.51□□□□□ -0.41
DFFB-209ENST00000477548 GINS4Q9BRT9 223 aa12.51□□□□□ -0.41
DFFB-209ENST00000477548 SLC6A5Q9Y345 797 aa12.51□□□□□ -0.41
DFFB-209ENST00000477548 CHD7Q9P2D1 2997 aa12.51□□□□□ -0.41
DFFB-209ENST00000477548 OR2M5A3KFT3 312 aa12.51□□□□□ -0.41
DFFB-209ENST00000477548 RTCAO00442 366 aaKnown RBP12.51□□□□□ -0.41
DFFB-209ENST00000477548 FRS3O43559 492 aa12.51□□□□□ -0.41
DFFB-209ENST00000477548 EPPINO95925 133 aa12.51□□□□□ -0.41
DFFB-209ENST00000477548 MT-ND5P03915 603 aa12.51□□□□□ -0.41
DFFB-209ENST00000477548 CPN1P15169 458 aa12.51□□□□□ -0.41
DFFB-209ENST00000477548 NPPBP16860 134 aa12.51□□□□□ -0.41
DFFB-209ENST00000477548 OC90Q02509 493 aaPredicted RBP12.51□□□□□ -0.41
DFFB-209ENST00000477548 MELKQ14680 651 aa12.51□□□□□ -0.41
DFFB-209ENST00000477548 TRAM2Q15035 370 aa12.51□□□□□ -0.41
DFFB-209ENST00000477548 TRAM1Q15629 374 aa12.51□□□□□ -0.41
DFFB-209ENST00000477548 ZNF697Q5TEC3 545 aa12.51□□□□□ -0.41
DFFB-209ENST00000477548 RELL2Q8NC24 303 aaPredicted RBP12.51□□□□□ -0.41
DFFB-209ENST00000477548 ALG14Q96F25 216 aa12.51□□□□□ -0.41
DFFB-209ENST00000477548 SLC35G5Q96KT7 338 aa12.51□□□□□ -0.41
DFFB-209ENST00000477548 NDC1Q9BTX1 674 aa12.51□□□□□ -0.41
DFFB-209ENST00000477548 GPR62Q9BZJ7 368 aa12.51□□□□□ -0.41
DFFB-209ENST00000477548 MED20Q9H944 212 aa12.51□□□□□ -0.41
DFFB-209ENST00000477548 MED17Q9NVC6 651 aa12.51□□□□□ -0.41
DFFB-209ENST00000477548 AKAP7Q9P0M2 348 aaPredicted RBP12.51□□□□□ -0.41
DFFB-209ENST00000477548 ABRACLQ9P1F3 81 aa12.51□□□□□ -0.41
DFFB-209ENST00000477548 SLC13A4Q9UKG4 626 aa12.51□□□□□ -0.41
DFFB-209ENST00000477548 ENTPD4Q9Y227 616 aa12.51□□□□□ -0.41
DFFB-209ENST00000477548 ZNF106Q9H2Y7 1883 aaKnown RBP12.5□□□□□ -0.41
DFFB-209ENST00000477548 TRAV20A0A0B4J274 112 aa12.5□□□□□ -0.41
DFFB-209ENST00000477548 SERPIND1P05546 499 aa12.5□□□□□ -0.41
DFFB-209ENST00000477548 ALPPL2P10696 532 aa12.5□□□□□ -0.41
DFFB-209ENST00000477548 SLC16A1P53985 500 aa12.5□□□□□ -0.41
DFFB-209ENST00000477548 AP3S2P59780 193 aa12.5□□□□□ -0.41
DFFB-209ENST00000477548 FGL2Q14314 439 aa12.5□□□□□ -0.41
DFFB-209ENST00000477548 TCTN1Q2MV58 587 aa12.5□□□□□ -0.41
DFFB-209ENST00000477548 MAMDC2Q7Z304 686 aaPredicted RBP12.5□□□□□ -0.41
DFFB-209ENST00000477548 HDDC3Q8N4P3 179 aa12.5□□□□□ -0.41
DFFB-209ENST00000477548 C17orf47Q8NEP4 570 aa12.5□□□□□ -0.41
DFFB-209ENST00000477548 PXT1Q8NFP0 134 aa12.5□□□□□ -0.41
DFFB-209ENST00000477548 OR13C5Q8NGS8 318 aa12.5□□□□□ -0.41
DFFB-209ENST00000477548 DNTTIP1Q9H147 329 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms