RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, human

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-212	ENST00000477520	AKR7L	Q8NHP1	331 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	COQ8A	Q8NI60	647 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	IFI44	Q8TCB0	444 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	SLC7A13	Q8TCU3	470 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	ACOT11	Q8WXI4	607 aa	Predicted RBP	4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	R3HDM4	Q96D70	268 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	RAB3C	Q96E17	227 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	ELMOD3	Q96FG2	381 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	C1orf159	Q96HA4	380 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	ZNF419	Q96HQ0	510 aa	Predicted RBP	4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	CELF6	Q96J87	481 aa	Known RBP	4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	NOL4L	Q96MY1	436 aa	Predicted RBP	4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	TAAR9	Q96RI9	348 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	CCNL2	Q96S94	520 aa	Predicted RBP	4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	TBL1Y	Q9BQ87	522 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	CPPED1	Q9BRF8	314 aa	Predicted RBP	4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	TMED9	Q9BVK6	235 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	DPY30	Q9C005	99 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	DERL2	Q9GZP9	239 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	TOLLIP	Q9H0E2	274 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	TUBB1	Q9H4B7	451 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	ZNF768	Q9H5H4	540 aa	Known RBP	4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	ELAC1	Q9H777	363 aa	Known RBP	4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	MVB12B	Q9H7P6	319 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	ZNF703	Q9H7S9	590 aa	Predicted RBP	4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	CERS4	Q9HA82	394 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	SLC6A20	Q9NP91	592 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	SERHL	Q9NQF3	203 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	SLC2A4RG	Q9NR83	387 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	THSD1	Q9NS62	852 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	SLC22A11	Q9NSA0	550 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	NUDT15	Q9NV35	164 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	C14orf105	Q9NVL8	296 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	GPR83	Q9NYM4	423 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	ZNF226	Q9NYT6	803 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	TAS2R13	Q9NYV9	303 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	VSX1	Q9NZR4	365 aa	Predicted RBP	4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	CALML5	Q9NZT1	146 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	VAPA	Q9P0L0	249 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	ZNF629	Q9UEG4	869 aa	Predicted RBP	4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	FBXL2	Q9UKC9	423 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	CHTOP	Q9Y3Y2	248 aa	Known RBP	4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	PIAS3	Q9Y6X2	628 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	CENPF	P49454	3210 aa		4.38	□□□□□ -1.71
PTCD3-212	ENST00000477520		A0A087WZ62	844 aa		4.38	□□□□□ -1.71
PTCD3-212	ENST00000477520	C2orf92	A0A1B0GVN3	265 aa		4.38	□□□□□ -1.71
PTCD3-212	ENST00000477520	OR2M5	A3KFT3	312 aa		4.38	□□□□□ -1.71
PTCD3-212	ENST00000477520	MBLAC1	A4D2B0	266 aa	Predicted RBP	4.38	□□□□□ -1.71
PTCD3-212	ENST00000477520	NEMP2	A6NFY4	417 aa		4.38	□□□□□ -1.71
PTCD3-212	ENST00000477520	CCDC85C	A6NKD9	419 aa		4.38	□□□□□ -1.71
PTCD3-212	ENST00000477520	OR6C75	A6NL08	312 aa		4.38	□□□□□ -1.71
PTCD3-212	ENST00000477520		J3KR12	359 aa		4.38	□□□□□ -1.71
PTCD3-212	ENST00000477520	AP4M1	O00189	453 aa		4.38	□□□□□ -1.71
PTCD3-212	ENST00000477520	TNFRSF11B	O00300	401 aa		4.38	□□□□□ -1.71
PTCD3-212	ENST00000477520	CLDN4	O14493	209 aa		4.38	□□□□□ -1.71
PTCD3-212	ENST00000477520	LRRTM2	O43300	516 aa		4.38	□□□□□ -1.71
PTCD3-212	ENST00000477520	TGOLN2	O43493	480 aa		4.38	□□□□□ -1.71
PTCD3-212	ENST00000477520	GMFG	O60234	142 aa		4.38	□□□□□ -1.71
PTCD3-212	ENST00000477520	FADS1	O60427	444 aa		4.38	□□□□□ -1.71
PTCD3-212	ENST00000477520	CREBL2	O60519	120 aa	Predicted RBP	4.38	□□□□□ -1.71
PTCD3-212	ENST00000477520	MAFK	O60675	156 aa		4.38	□□□□□ -1.71
PTCD3-212	ENST00000477520	RAMP2	O60895	175 aa		4.38	□□□□□ -1.71
PTCD3-212	ENST00000477520	EFCAB14	O75071	495 aa		4.38	□□□□□ -1.71
PTCD3-212	ENST00000477520	GGCT	O75223	188 aa	Known RBP	4.38	□□□□□ -1.71
PTCD3-212	ENST00000477520	SH3BGRL	O75368	114 aa		4.38	□□□□□ -1.71
PTCD3-212	ENST00000477520	CS	O75390	466 aa	Known RBP	4.38	□□□□□ -1.71
PTCD3-212	ENST00000477520	OR2F2	O95006	317 aa		4.38	□□□□□ -1.71
PTCD3-212	ENST00000477520	OTC	P00480	354 aa		4.38	□□□□□ -1.71
PTCD3-212	ENST00000477520	ADA	P00813	363 aa		4.38	□□□□□ -1.71
PTCD3-212	ENST00000477520	IFNA17	P01571	189 aa		4.38	□□□□□ -1.71
PTCD3-212	ENST00000477520	IGHV2-5	P01817	119 aa		4.38	□□□□□ -1.71
PTCD3-212	ENST00000477520	SERPIND1	P05546	499 aa		4.38	□□□□□ -1.71
PTCD3-212	ENST00000477520	HEXB	P07686	556 aa		4.38	□□□□□ -1.71
PTCD3-212	ENST00000477520	HKR1	P10072	659 aa		4.38	□□□□□ -1.71
PTCD3-212	ENST00000477520	APEH	P13798	732 aa	Known RBP	4.38	□□□□□ -1.71
PTCD3-212	ENST00000477520	CD1D	P15813	335 aa		4.38	□□□□□ -1.71
PTCD3-212	ENST00000477520	ABO	P16442	354 aa		4.38	□□□□□ -1.71
PTCD3-212	ENST00000477520	TYRP1	P17643	537 aa		4.38	□□□□□ -1.71
PTCD3-212	ENST00000477520	TPH1	P17752	444 aa		4.38	□□□□□ -1.71
PTCD3-212	ENST00000477520	FDXR	P22570	491 aa		4.38	□□□□□ -1.71
PTCD3-212	ENST00000477520	FPR3	P25089	353 aa		4.38	□□□□□ -1.71
PTCD3-212	ENST00000477520	ABCD3	P28288	659 aa		4.38	□□□□□ -1.71
PTCD3-212	ENST00000477520	S100A2	P29034	98 aa		4.38	□□□□□ -1.71
PTCD3-212	ENST00000477520	HOXC8	P31273	242 aa		4.38	□□□□□ -1.71
PTCD3-212	ENST00000477520	CCR7	P32248	378 aa		4.38	□□□□□ -1.71
PTCD3-212	ENST00000477520	GJA4	P35212	333 aa		4.38	□□□□□ -1.71
PTCD3-212	ENST00000477520	AVPR1A	P37288	418 aa		4.38	□□□□□ -1.71
PTCD3-212	ENST00000477520	SLC1A2	P43004	574 aa		4.38	□□□□□ -1.71
PTCD3-212	ENST00000477520	CRAT	P43155	626 aa		4.38	□□□□□ -1.71
PTCD3-212	ENST00000477520	IDH2	P48735	452 aa	Known RBP	4.38	□□□□□ -1.71
PTCD3-212	ENST00000477520	LHX1	P48742	406 aa		4.38	□□□□□ -1.71
PTCD3-212	ENST00000477520	RPL34	P49207	117 aa	Known RBP	4.38	□□□□□ -1.71
PTCD3-212	ENST00000477520	RGS19	P49795	217 aa		4.38	□□□□□ -1.71
PTCD3-212	ENST00000477520	ATXN1	P54253	815 aa	Known RBP	4.38	□□□□□ -1.71
PTCD3-212	ENST00000477520	GFRA1	P56159	465 aa		4.38	□□□□□ -1.71
PTCD3-212	ENST00000477520	WNT4	P56705	351 aa		4.38	□□□□□ -1.71
PTCD3-212	ENST00000477520	HNRNPK	P61978	463 aa	Known RBP eCLIP	4.38	□□□□□ -1.71
PTCD3-212	ENST00000477520	NHLH2	Q02577	135 aa		4.38	□□□□□ -1.71
PTCD3-212	ENST00000477520	RBBP4	Q09028	425 aa		4.38	□□□□□ -1.71
PTCD3-212	ENST00000477520	SCAP	Q12770	1279 aa		4.38	□□□□□ -1.71

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