RNA–Protein interactions for RNA: ENST00000477334.1

RBM39-231, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-231	ENST00000477334	ISG20L2	Q9H9L3	353 aa	Known RBP	2.96	□□□□□ -1.94
RBM39-231	ENST00000477334	FANCF	Q9NPI8	374 aa		2.96	□□□□□ -1.94
RBM39-231	ENST00000477334	FARSB	Q9NSD9	589 aa	Known RBP	2.96	□□□□□ -1.94
RBM39-231	ENST00000477334	COX16	Q9P0S2	106 aa		2.96	□□□□□ -1.94
RBM39-231	ENST00000477334	OR1A1	Q9P1Q5	309 aa		2.96	□□□□□ -1.94
RBM39-231	ENST00000477334	EXTL2	Q9UBQ6	330 aa		2.96	□□□□□ -1.94
RBM39-231	ENST00000477334	LAMP5	Q9UJQ1	280 aa		2.96	□□□□□ -1.94
RBM39-231	ENST00000477334		U3KQV3	271 aa		2.96	□□□□□ -1.94
RBM39-231	ENST00000477334	SMIM28	A0A1B0GU29	152 aa		2.95	□□□□□ -1.94
RBM39-231	ENST00000477334	FAM231B	A6NCW3	169 aa		2.95	□□□□□ -1.94
RBM39-231	ENST00000477334	ANGPT2	O15123	496 aa		2.95	□□□□□ -1.94
RBM39-231	ENST00000477334	TBL1X	O60907	577 aa		2.95	□□□□□ -1.94
RBM39-231	ENST00000477334	LYPLA1	O75608	230 aa	Predicted RBP	2.95	□□□□□ -1.94
RBM39-231	ENST00000477334	ACTL6A	O96019	429 aa		2.95	□□□□□ -1.94
RBM39-231	ENST00000477334	CHRNA1	P02708	482 aa		2.95	□□□□□ -1.94
RBM39-231	ENST00000477334	PCCB	P05166	539 aa		2.95	□□□□□ -1.94
RBM39-231	ENST00000477334	CALCB	P10092	127 aa		2.95	□□□□□ -1.94
RBM39-231	ENST00000477334	DRD3	P35462	400 aa		2.95	□□□□□ -1.94
RBM39-231	ENST00000477334	GCK	P35557	465 aa		2.95	□□□□□ -1.94
RBM39-231	ENST00000477334	SOX6	P35712	828 aa		2.95	□□□□□ -1.94
RBM39-231	ENST00000477334	HNMT	P50135	292 aa		2.95	□□□□□ -1.94
RBM39-231	ENST00000477334	KRTAP12-2	P59991	146 aa		2.95	□□□□□ -1.94
RBM39-231	ENST00000477334	OTUD4	Q01804	1114 aa	Known RBP	2.95	□□□□□ -1.94
RBM39-231	ENST00000477334	OC90	Q02509	493 aa	Predicted RBP	2.95	□□□□□ -1.94
RBM39-231	ENST00000477334	ELP6	Q0PNE2	266 aa		2.95	□□□□□ -1.94
RBM39-231	ENST00000477334	LRRC74A	Q0VAA2	488 aa		2.95	□□□□□ -1.94
RBM39-231	ENST00000477334	CEP55	Q53EZ4	464 aa		2.95	□□□□□ -1.94
RBM39-231	ENST00000477334	METTL11B	Q5VVY1	283 aa		2.95	□□□□□ -1.94
RBM39-231	ENST00000477334	ACSM5	Q6NUN0	579 aa		2.95	□□□□□ -1.94
RBM39-231	ENST00000477334	CBLN3	Q6UW01	205 aa		2.95	□□□□□ -1.94
RBM39-231	ENST00000477334	SCARA5	Q6ZMJ2	495 aa		2.95	□□□□□ -1.94
RBM39-231	ENST00000477334	DPY19L4	Q7Z388	723 aa		2.95	□□□□□ -1.94
RBM39-231	ENST00000477334	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	2.95	□□□□□ -1.94
RBM39-231	ENST00000477334	NANP	Q8TBE9	248 aa		2.95	□□□□□ -1.94
RBM39-231	ENST00000477334	RAB7B	Q96AH8	199 aa		2.95	□□□□□ -1.94
RBM39-231	ENST00000477334	DTNBP1	Q96EV8	351 aa		2.95	□□□□□ -1.94
RBM39-231	ENST00000477334	ZNF184	Q99676	751 aa	Predicted RBP	2.95	□□□□□ -1.94
RBM39-231	ENST00000477334	MRPL13	Q9BYD1	178 aa	Known RBP	2.95	□□□□□ -1.94
RBM39-231	ENST00000477334	PPDPF	Q9H3Y8	114 aa		2.95	□□□□□ -1.94
RBM39-231	ENST00000477334	CALHM2	Q9HA72	323 aa		2.95	□□□□□ -1.94
RBM39-231	ENST00000477334	NYAP2	Q9P242	653 aa		2.95	□□□□□ -1.94
RBM39-231	ENST00000477334	RIMS3	Q9UJD0	308 aa		2.95	□□□□□ -1.94
RBM39-231	ENST00000477334	MAB21L2	Q9Y586	359 aa		2.95	□□□□□ -1.94
RBM39-231	ENST00000477334	SPACA6	W5XKT8	324 aa		2.95	□□□□□ -1.94
RBM39-231	ENST00000477334	CARMIL1	Q5VZK9	1371 aa		2.95	□□□□□ -1.94
RBM39-231	ENST00000477334	ESYT2	A0FGR8	921 aa		2.94	□□□□□ -1.94
RBM39-231	ENST00000477334	TUBAL3	A6NHL2	446 aa		2.94	□□□□□ -1.94
RBM39-231	ENST00000477334		H0Y9J4	135 aa		2.94	□□□□□ -1.94
RBM39-231	ENST00000477334		H3BMQ9	156 aa		2.94	□□□□□ -1.94
RBM39-231	ENST00000477334	SNX4	O95219	450 aa		2.94	□□□□□ -1.94
RBM39-231	ENST00000477334	OPN1MW	P04001	364 aa		2.94	□□□□□ -1.94
RBM39-231	ENST00000477334	CSF2	P04141	144 aa		2.94	□□□□□ -1.94
RBM39-231	ENST00000477334	OPN1MW2	P0DN77	364 aa		2.94	□□□□□ -1.94
RBM39-231	ENST00000477334	OPN1MW3	P0DN78	364 aa		2.94	□□□□□ -1.94
RBM39-231	ENST00000477334	CLU	P10909	449 aa		2.94	□□□□□ -1.94
RBM39-231	ENST00000477334	ELK1	P19419	428 aa		2.94	□□□□□ -1.94
RBM39-231	ENST00000477334	SERPINA2	P20848	420 aa		2.94	□□□□□ -1.94
RBM39-231	ENST00000477334	ARFIP1	P53367	373 aa		2.94	□□□□□ -1.94
RBM39-231	ENST00000477334	AANAT	Q16613	207 aa		2.94	□□□□□ -1.94
RBM39-231	ENST00000477334	LRRC36	Q1X8D7	754 aa		2.94	□□□□□ -1.94
RBM39-231	ENST00000477334	SPATA46	Q5T0L3	261 aa		2.94	□□□□□ -1.94
RBM39-231	ENST00000477334	ATAD3B	Q5T9A4	648 aa		2.94	□□□□□ -1.94
RBM39-231	ENST00000477334	LCE3A	Q5TA76	89 aa		2.94	□□□□□ -1.94
RBM39-231	ENST00000477334	ARMCX2	Q7L311	632 aa		2.94	□□□□□ -1.94
RBM39-231	ENST00000477334	TMEM17	Q86X19	198 aa		2.94	□□□□□ -1.94
RBM39-231	ENST00000477334	ZNF573	Q86YE8	665 aa		2.94	□□□□□ -1.94
RBM39-231	ENST00000477334	FRAT1	Q92837	279 aa	Predicted RBP	2.94	□□□□□ -1.94
RBM39-231	ENST00000477334	NEIL2	Q969S2	332 aa		2.94	□□□□□ -1.94
RBM39-231	ENST00000477334	FGGY	Q96C11	551 aa		2.94	□□□□□ -1.94
RBM39-231	ENST00000477334	TTC25	Q96NG3	672 aa		2.94	□□□□□ -1.94
RBM39-231	ENST00000477334	OR5B2	Q96R09	309 aa		2.94	□□□□□ -1.94
RBM39-231	ENST00000477334	CYP2S1	Q96SQ9	504 aa		2.94	□□□□□ -1.94
RBM39-231	ENST00000477334	ERP44	Q9BS26	406 aa		2.94	□□□□□ -1.94
RBM39-231	ENST00000477334	TCHP	Q9BT92	498 aa		2.94	□□□□□ -1.94
RBM39-231	ENST00000477334	ZNF416	Q9BWM5	594 aa		2.94	□□□□□ -1.94
RBM39-231	ENST00000477334	CRNKL1	Q9BZJ0	848 aa	Known RBP	2.94	□□□□□ -1.94
RBM39-231	ENST00000477334	WDR76	Q9H967	626 aa		2.94	□□□□□ -1.94
RBM39-231	ENST00000477334	DCAF16	Q9NXF7	216 aa		2.94	□□□□□ -1.94
RBM39-231	ENST00000477334	ANAPC11	Q9NYG5	84 aa		2.94	□□□□□ -1.94
RBM39-231	ENST00000477334	ADAM22	Q9P0K1	906 aa		2.94	□□□□□ -1.94
RBM39-231	ENST00000477334	ONECUT1	Q9UBC0	465 aa		2.94	□□□□□ -1.94
RBM39-231	ENST00000477334	MFHAS1	Q9Y4C4	1052 aa		2.94	□□□□□ -1.94
RBM39-231	ENST00000477334	LOC100131303	A0A0U1RQF7	123 aa		2.93	□□□□□ -1.94
RBM39-231	ENST00000477334	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	2.93	□□□□□ -1.94
RBM39-231	ENST00000477334	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	2.93	□□□□□ -1.94
RBM39-231	ENST00000477334		A0A1B0GWJ7	208 aa		2.93	□□□□□ -1.94
RBM39-231	ENST00000477334		A0A1W2PNU3	283 aa	Predicted RBP	2.93	□□□□□ -1.94
RBM39-231	ENST00000477334	MAPK13	O15264	365 aa		2.93	□□□□□ -1.94
RBM39-231	ENST00000477334	PALM	O75781	387 aa		2.93	□□□□□ -1.94
RBM39-231	ENST00000477334	B3GAT3	O94766	335 aa		2.93	□□□□□ -1.94
RBM39-231	ENST00000477334	F10	P00742	488 aa		2.93	□□□□□ -1.94
RBM39-231	ENST00000477334	OPN1LW	P04000	364 aa		2.93	□□□□□ -1.94
RBM39-231	ENST00000477334	KRT6B	P04259	564 aa		2.93	□□□□□ -1.94
RBM39-231	ENST00000477334	SEMG1	P04279	462 aa		2.93	□□□□□ -1.94
RBM39-231	ENST00000477334	IGF1	P05019	195 aa		2.93	□□□□□ -1.94
RBM39-231	ENST00000477334	EPB41	P11171	864 aa	Known RBP	2.93	□□□□□ -1.94
RBM39-231	ENST00000477334	IGLL1	P15814	213 aa		2.93	□□□□□ -1.94
RBM39-231	ENST00000477334	RPS2	P15880	293 aa	Known RBP	2.93	□□□□□ -1.94
RBM39-231	ENST00000477334	EPHX2	P34913	555 aa		2.93	□□□□□ -1.94
RBM39-231	ENST00000477334	RBMX	P38159	391 aa	Known RBP	2.93	□□□□□ -1.94

Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms