RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 LAT2Q9GZY6 243 aa14.4□□□□□ -0.1
COPS3-207ENST00000477299 PLSCR2Q9NRY7 297 aa14.4□□□□□ -0.1
COPS3-207ENST00000477299 SEC14L3Q9UDX4 400 aa14.4□□□□□ -0.1
COPS3-207ENST00000477299 CD300AQ9UGN4 299 aa14.4□□□□□ -0.1
COPS3-207ENST00000477299 EGFL7Q9UHF1 273 aa14.4□□□□□ -0.1
COPS3-207ENST00000477299 ANGPT4Q9Y264 503 aa14.4□□□□□ -0.1
COPS3-207ENST00000477299 RP1L1Q8IWN7 2480 aaPredicted RBP14.39□□□□□ -0.11
COPS3-207ENST00000477299 C15orf38-AP3S2A0A0A6YYH1 394 aa14.39□□□□□ -0.11
COPS3-207ENST00000477299 ELOVL7A1L3X0 281 aa14.39□□□□□ -0.11
COPS3-207ENST00000477299 CDHR4A6H8M9 788 aa14.39□□□□□ -0.11
COPS3-207ENST00000477299 H3BNH8 94 aa14.39□□□□□ -0.11
COPS3-207ENST00000477299 EFNA2O43921 213 aa14.39□□□□□ -0.11
COPS3-207ENST00000477299 EDN3P14138 238 aa14.39□□□□□ -0.11
COPS3-207ENST00000477299 IL11P20809 199 aa14.39□□□□□ -0.11
COPS3-207ENST00000477299 SRD5A2P31213 254 aa14.39□□□□□ -0.11
COPS3-207ENST00000477299 ACAA2P42765 397 aaKnown RBP14.39□□□□□ -0.11
COPS3-207ENST00000477299 P2RX1P51575 399 aa14.39□□□□□ -0.11
COPS3-207ENST00000477299 BNIP1Q12981 228 aa14.39□□□□□ -0.11
COPS3-207ENST00000477299 GNA13Q14344 377 aa14.39□□□□□ -0.11
COPS3-207ENST00000477299 C3AR1Q16581 482 aa14.39□□□□□ -0.11
COPS3-207ENST00000477299 GFRALQ6UXV0 394 aa14.39□□□□□ -0.11
COPS3-207ENST00000477299 ARPINQ7Z6K5 226 aa14.39□□□□□ -0.11
COPS3-207ENST00000477299 ZNF605Q86T29 641 aa14.39□□□□□ -0.11
COPS3-207ENST00000477299 OR14L1PQ8NHC6 308 aa14.39□□□□□ -0.11
COPS3-207ENST00000477299 CLPTM1LQ96KA5 538 aa14.39□□□□□ -0.11
COPS3-207ENST00000477299 SPATA9Q9BWV2 254 aa14.39□□□□□ -0.11
COPS3-207ENST00000477299 ALG2Q9H553 416 aa14.39□□□□□ -0.11
COPS3-207ENST00000477299 LDAHQ9H6V9 325 aa14.39□□□□□ -0.11
COPS3-207ENST00000477299 ACKR4Q9NPB9 350 aa14.39□□□□□ -0.11
COPS3-207ENST00000477299 SPAG4Q9NPE6 437 aa14.39□□□□□ -0.11
COPS3-207ENST00000477299 TAS2R10Q9NYW0 307 aa14.39□□□□□ -0.11
COPS3-207ENST00000477299 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.39□□□□□ -0.11
COPS3-207ENST00000477299 B4GALT7Q9UBV7 327 aa14.39□□□□□ -0.11
COPS3-207ENST00000477299 DKKL1Q9UK85 242 aa14.39□□□□□ -0.11
COPS3-207ENST00000477299 ARHGAP21Q5T5U3 1957 aa14.38□□□□□ -0.11
COPS3-207ENST00000477299 TRGV5A0A0B4J1U4 118 aa14.38□□□□□ -0.11
COPS3-207ENST00000477299 ANKUB1A6NFN9 424 aa14.38□□□□□ -0.11
COPS3-207ENST00000477299 NPIPA2E9PIF3 369 aa14.38□□□□□ -0.11
COPS3-207ENST00000477299 NPIPA3F8WFD2 350 aa14.38□□□□□ -0.11
COPS3-207ENST00000477299 EIF4E2O60573 245 aaKnown RBP14.38□□□□□ -0.11
COPS3-207ENST00000477299 DNAJA2O60884 412 aa14.38□□□□□ -0.11
COPS3-207ENST00000477299 NUDT14O95848 222 aa14.38□□□□□ -0.11
COPS3-207ENST00000477299 OPN1LWP04000 364 aa14.38□□□□□ -0.11
COPS3-207ENST00000477299 LINGO3P0C6S8 592 aa14.38□□□□□ -0.11
COPS3-207ENST00000477299 TNFRSF1BP20333 461 aa14.38□□□□□ -0.11
COPS3-207ENST00000477299 CD247P20963 164 aa14.38□□□□□ -0.11
COPS3-207ENST00000477299 GNLYP22749 145 aa14.38□□□□□ -0.11
COPS3-207ENST00000477299 MSX1P28360 303 aa14.38□□□□□ -0.11
COPS3-207ENST00000477299 DSCR4P56555 118 aaPredicted RBP14.38□□□□□ -0.11
COPS3-207ENST00000477299 EIF2S3LQ2VIR3 472 aaKnown RBP14.38□□□□□ -0.11
COPS3-207ENST00000477299 PLPPR5Q32ZL2 321 aa14.38□□□□□ -0.11
COPS3-207ENST00000477299 C16orf89Q6UX73 402 aa14.38□□□□□ -0.11
COPS3-207ENST00000477299 CCDC80Q76M96 950 aa14.38□□□□□ -0.11
COPS3-207ENST00000477299 RBM45Q8IUH3 476 aaKnown RBP14.38□□□□□ -0.11
COPS3-207ENST00000477299 ARMC8Q8IUR7 673 aa14.38□□□□□ -0.11
COPS3-207ENST00000477299 LACC1Q8IV20 430 aa14.38□□□□□ -0.11
COPS3-207ENST00000477299 MISPQ8IVT2 679 aa14.38□□□□□ -0.11
COPS3-207ENST00000477299 OR4D11Q8NGI4 311 aa14.38□□□□□ -0.11
COPS3-207ENST00000477299 NEIL3Q8TAT5 605 aa14.38□□□□□ -0.11
COPS3-207ENST00000477299 PMM1Q92871 262 aa14.38□□□□□ -0.11
COPS3-207ENST00000477299 KCTD14Q9BQ13 255 aaPredicted RBP14.38□□□□□ -0.11
COPS3-207ENST00000477299 PCDHAC1Q9H158 963 aa14.38□□□□□ -0.11
COPS3-207ENST00000477299 EXO5Q9H790 373 aa14.38□□□□□ -0.11
COPS3-207ENST00000477299 MED17Q9NVC6 651 aa14.38□□□□□ -0.11
COPS3-207ENST00000477299 QPCTLQ9NXS2 382 aa14.38□□□□□ -0.11
COPS3-207ENST00000477299 ZNF232Q9UNY5 417 aa14.38□□□□□ -0.11
COPS3-207ENST00000477299 A0A1B0GVC2 190 aa14.37□□□□□ -0.11
COPS3-207ENST00000477299 OR2M5A3KFT3 312 aa14.37□□□□□ -0.11
COPS3-207ENST00000477299 KDM4EB2RXH2 506 aaPredicted RBP14.37□□□□□ -0.11
COPS3-207ENST00000477299 CXCR6O00574 342 aa14.37□□□□□ -0.11
COPS3-207ENST00000477299 TPST2O60704 377 aa14.37□□□□□ -0.11
COPS3-207ENST00000477299 THBS1P07996 1170 aa14.37□□□□□ -0.11
COPS3-207ENST00000477299 BMP7P18075 431 aa14.37□□□□□ -0.11
COPS3-207ENST00000477299 PSMA4P25789 261 aaKnown RBP14.37□□□□□ -0.11
COPS3-207ENST00000477299 KDELR2P33947 212 aa14.37□□□□□ -0.11
COPS3-207ENST00000477299 MNAT1P51948 309 aa14.37□□□□□ -0.11
COPS3-207ENST00000477299 GFRA1P56159 465 aa14.37□□□□□ -0.11
COPS3-207ENST00000477299 VEZF1Q14119 521 aa14.37□□□□□ -0.11
COPS3-207ENST00000477299 LARS2Q15031 903 aaKnown RBP14.37□□□□□ -0.11
COPS3-207ENST00000477299 QPRTQ15274 297 aa14.37□□□□□ -0.11
COPS3-207ENST00000477299 TMEM44Q2T9K0 475 aa14.37□□□□□ -0.11
COPS3-207ENST00000477299 LIN52Q52LA3 116 aa14.37□□□□□ -0.11
COPS3-207ENST00000477299 KRTCAP3Q53RY4 240 aa14.37□□□□□ -0.11
COPS3-207ENST00000477299 EMC4Q5J8M3 183 aa14.37□□□□□ -0.11
COPS3-207ENST00000477299 RNF220Q5VTB9 566 aa14.37□□□□□ -0.11
COPS3-207ENST00000477299 ERICH5Q6P6B1 374 aa14.37□□□□□ -0.11
COPS3-207ENST00000477299 BNC2Q6ZN30 1099 aaPredicted RBP14.37□□□□□ -0.11
COPS3-207ENST00000477299 GHDCQ8N2G8 530 aa14.37□□□□□ -0.11
COPS3-207ENST00000477299 ST6GALNAC3Q8NDV1 305 aa14.37□□□□□ -0.11
COPS3-207ENST00000477299 OR5M9Q8NGP3 310 aa14.37□□□□□ -0.11
COPS3-207ENST00000477299 OR5W2Q8NH69 310 aa14.37□□□□□ -0.11
COPS3-207ENST00000477299 FIG4Q92562 907 aa14.37□□□□□ -0.11
COPS3-207ENST00000477299 ZNF607Q96SK3 696 aa14.37□□□□□ -0.11
COPS3-207ENST00000477299 UGT2B28Q9BY64 529 aa14.37□□□□□ -0.11
COPS3-207ENST00000477299 PTGES2Q9H7Z7 377 aa14.37□□□□□ -0.11
COPS3-207ENST00000477299 SLC35A3Q9Y2D2 325 aa14.37□□□□□ -0.11
COPS3-207ENST00000477299 IFT52Q9Y366 437 aa14.37□□□□□ -0.11
COPS3-207ENST00000477299 ZNF337Q9Y3M9 751 aa14.37□□□□□ -0.11
COPS3-207ENST00000477299 POLEQ07864 2286 aa14.37□□□□□ -0.11
COPS3-207ENST00000477299 H0YC42 278 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms