RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 FOXD3Q9UJU5 478 aaPredicted RBP19.02■□□□□ 0.64
LIME1-204ENST00000476183 ZNF175Q9Y473 711 aa19.02■□□□□ 0.64
LIME1-204ENST00000476183 AKAP6Q13023 2319 aa19.01■□□□□ 0.63
LIME1-204ENST00000476183 AQP8O94778 261 aa19.01■□□□□ 0.63
LIME1-204ENST00000476183 AGR2O95994 175 aa19.01■□□□□ 0.63
LIME1-204ENST00000476183 IL6P05231 212 aa19.01■□□□□ 0.63
LIME1-204ENST00000476183 SHC1P29353 583 aa19.01■□□□□ 0.63
LIME1-204ENST00000476183 KIR2DL3P43628 341 aa19.01■□□□□ 0.63
LIME1-204ENST00000476183 EIF1AXP47813 144 aaKnown RBP19.01■□□□□ 0.63
LIME1-204ENST00000476183 SLC6A8P48029 635 aa19.01■□□□□ 0.63
LIME1-204ENST00000476183 SUMO3P55854 103 aaPredicted RBP19.01■□□□□ 0.63
LIME1-204ENST00000476183 RPS3AP61247 264 aaKnown RBP19.01■□□□□ 0.63
LIME1-204ENST00000476183 ATAD3BQ5T9A4 648 aa19.01■□□□□ 0.63
LIME1-204ENST00000476183 AP1ARQ63HQ0 302 aa19.01■□□□□ 0.63
LIME1-204ENST00000476183 VWA1Q6PCB0 445 aa19.01■□□□□ 0.63
LIME1-204ENST00000476183 FRRS1Q6ZNA5 592 aa19.01■□□□□ 0.63
LIME1-204ENST00000476183 LUZP2Q86TE4 346 aa19.01■□□□□ 0.63
LIME1-204ENST00000476183 ZZZ3Q8IYH5 903 aa19.01■□□□□ 0.63
LIME1-204ENST00000476183 OR10D3Q8NH80 312 aa19.01■□□□□ 0.63
LIME1-204ENST00000476183 RFWD2Q8NHY2 731 aa19.01■□□□□ 0.63
LIME1-204ENST00000476183 ROPN1LQ96C74 230 aa19.01■□□□□ 0.63
LIME1-204ENST00000476183 ZG16BQ96DA0 208 aa19.01■□□□□ 0.63
LIME1-204ENST00000476183 STARD4Q96DR4 205 aa19.01■□□□□ 0.63
LIME1-204ENST00000476183 LRRC46Q96FV0 321 aa19.01■□□□□ 0.63
LIME1-204ENST00000476183 EBF4Q9BQW3 602 aa19.01■□□□□ 0.63
LIME1-204ENST00000476183 SAP130Q9H0E3 1048 aa19.01■□□□□ 0.63
LIME1-204ENST00000476183 RNF122Q9H9V4 155 aa19.01■□□□□ 0.63
LIME1-204ENST00000476183 SLC24A3Q9HC58 644 aa19.01■□□□□ 0.63
LIME1-204ENST00000476183 HRNRQ86YZ3 2850 aaPredicted RBP19.01■□□□□ 0.63
LIME1-204ENST00000476183 A0A0J9YW62 118 aa19■□□□□ 0.63
LIME1-204ENST00000476183 ADAMDEC1O15204 470 aa19■□□□□ 0.63
LIME1-204ENST00000476183 ZNF264O43296 627 aa19■□□□□ 0.63
LIME1-204ENST00000476183 EIF4E2O60573 245 aaKnown RBP19■□□□□ 0.63
LIME1-204ENST00000476183 BCAS1O75363 584 aaPredicted RBP19■□□□□ 0.63
LIME1-204ENST00000476183 NUDT14O95848 222 aa19■□□□□ 0.63
LIME1-204ENST00000476183 CRHP06850 196 aa19■□□□□ 0.63
LIME1-204ENST00000476183 GUSBP08236 651 aa19■□□□□ 0.63
LIME1-204ENST00000476183 UBL4AP11441 157 aa19■□□□□ 0.63
LIME1-204ENST00000476183 EIF1P41567 113 aaKnown RBP19■□□□□ 0.63
LIME1-204ENST00000476183 KIR2DL2P43627 348 aaPredicted RBP19■□□□□ 0.63
LIME1-204ENST00000476183 IDH3AP50213 366 aa19■□□□□ 0.63
LIME1-204ENST00000476183 PPP2R2AP63151 447 aa19■□□□□ 0.63
LIME1-204ENST00000476183 LRRC74AQ0VAA2 488 aa19■□□□□ 0.63
LIME1-204ENST00000476183 SKP2Q13309 424 aa19■□□□□ 0.63
LIME1-204ENST00000476183 COX20Q5RI15 118 aa19■□□□□ 0.63
LIME1-204ENST00000476183 OR2A2Q6IF42 318 aa19■□□□□ 0.63
LIME1-204ENST00000476183 DNAJC14Q6Y2X3 702 aaPredicted RBP19■□□□□ 0.63
LIME1-204ENST00000476183 HMGN2P46Q86SG4 172 aa19■□□□□ 0.63
LIME1-204ENST00000476183 TMCO5AQ8N6Q1 288 aa19■□□□□ 0.63
LIME1-204ENST00000476183 TRIML2Q8N7C3 387 aa19■□□□□ 0.63
LIME1-204ENST00000476183 GOLGA6L1Q8N7Z2 621 aa19■□□□□ 0.63
LIME1-204ENST00000476183 OR5W2Q8NH69 310 aa19■□□□□ 0.63
LIME1-204ENST00000476183 FBXO27Q8NI29 283 aa19■□□□□ 0.63
LIME1-204ENST00000476183 PNPT1Q8TCS8 783 aaKnown RBP19■□□□□ 0.63
LIME1-204ENST00000476183 RBM24Q9BX46 236 aaKnown RBP19■□□□□ 0.63
LIME1-204ENST00000476183 LAT2Q9GZY6 243 aa19■□□□□ 0.63
LIME1-204ENST00000476183 PIGMQ9H3S5 423 aa19■□□□□ 0.63
LIME1-204ENST00000476183 STOML1Q9UBI4 398 aa19■□□□□ 0.63
LIME1-204ENST00000476183 PACSIN3Q9UKS6 424 aa19■□□□□ 0.63
LIME1-204ENST00000476183 WDR45Q9Y484 360 aa19■□□□□ 0.63
LIME1-204ENST00000476183 RFXANKO14593 260 aa18.99■□□□□ 0.63
LIME1-204ENST00000476183 TNFSF11O14788 317 aa18.99■□□□□ 0.63
LIME1-204ENST00000476183 CXCL13O43927 109 aa18.99■□□□□ 0.63
LIME1-204ENST00000476183 TGDSO95455 350 aa18.99■□□□□ 0.63
LIME1-204ENST00000476183 NTN1O95631 604 aa18.99■□□□□ 0.63
LIME1-204ENST00000476183 PRKCAP17252 672 aa18.99■□□□□ 0.63
LIME1-204ENST00000476183 POLR2JP52435 117 aaKnown RBP18.99■□□□□ 0.63
LIME1-204ENST00000476183 CHRNEQ04844 493 aa18.99■□□□□ 0.63
LIME1-204ENST00000476183 GUSBP1Q15486 140 aa18.99■□□□□ 0.63
LIME1-204ENST00000476183 SYPL1Q16563 259 aa18.99■□□□□ 0.63
LIME1-204ENST00000476183 SGCBQ16585 318 aa18.99■□□□□ 0.63
LIME1-204ENST00000476183 TIGD2Q4W5G0 525 aa18.99■□□□□ 0.63
LIME1-204ENST00000476183 BTLAQ7Z6A9 289 aa18.99■□□□□ 0.63
LIME1-204ENST00000476183 LURAP1LQ8IV03 231 aa18.99■□□□□ 0.63
LIME1-204ENST00000476183 LILRA2Q8N149 483 aa18.99■□□□□ 0.63
LIME1-204ENST00000476183 MIER2Q8N344 545 aa18.99■□□□□ 0.63
LIME1-204ENST00000476183 ANKFN1Q8N957 763 aa18.99■□□□□ 0.63
LIME1-204ENST00000476183 CNEP1R1Q8N9A8 125 aa18.99■□□□□ 0.63
LIME1-204ENST00000476183 OR2V1Q8NHB1 315 aa18.99■□□□□ 0.63
LIME1-204ENST00000476183 ZFP90Q8TF47 636 aa18.99■□□□□ 0.63
LIME1-204ENST00000476183 DYDC1Q8WWB3 177 aa18.99■□□□□ 0.63
LIME1-204ENST00000476183 VPS33AQ96AX1 596 aa18.99■□□□□ 0.63
LIME1-204ENST00000476183 TCF7L2Q9NQB0 619 aa18.99■□□□□ 0.63
LIME1-204ENST00000476183 POLE3Q9NRF9 147 aa18.99■□□□□ 0.63
LIME1-204ENST00000476183 INTS9Q9NV88 658 aaKnown RBP18.99■□□□□ 0.63
LIME1-204ENST00000476183 GALNT8Q9NY28 637 aa18.99■□□□□ 0.63
LIME1-204ENST00000476183 ABCA4P78363 2273 aa18.99■□□□□ 0.63
LIME1-204ENST00000476183 A8MXE2 369 aa18.98■□□□□ 0.63
LIME1-204ENST00000476183 DNAJA2O60884 412 aa18.98■□□□□ 0.63
LIME1-204ENST00000476183 H6PDO95479 791 aa18.98■□□□□ 0.63
LIME1-204ENST00000476183 CSTAP01040 98 aa18.98■□□□□ 0.63
LIME1-204ENST00000476183 ELK4P28324 431 aa18.98■□□□□ 0.63
LIME1-204ENST00000476183 ADH6P28332 368 aa18.98■□□□□ 0.63
LIME1-204ENST00000476183 PEX19P40855 299 aa18.98■□□□□ 0.63
LIME1-204ENST00000476183 CCR4P51679 360 aa18.98■□□□□ 0.63
LIME1-204ENST00000476183 MVDP53602 400 aa18.98■□□□□ 0.63
LIME1-204ENST00000476183 EEF1A1P68104 462 aaKnown RBP18.98■□□□□ 0.63
LIME1-204ENST00000476183 SIRPAP78324 504 aa18.98■□□□□ 0.63
LIME1-204ENST00000476183 FGFBP1Q14512 234 aa18.98■□□□□ 0.63
LIME1-204ENST00000476183 QPRTQ15274 297 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms